RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 RGPD4Q7Z3J3 1758 aa14.09□□□□□ -0.15
PTPN7-208ENST00000476061 CD163L1Q9NR16 1453 aa14.08□□□□□ -0.16
PTPN7-208ENST00000476061 TRIM37O94972 964 aa14.08□□□□□ -0.16
PTPN7-208ENST00000476061 CAMKK2Q96RR4 588 aa14.08□□□□□ -0.16
PTPN7-208ENST00000476061 NFAT5O94916 1531 aa14.08□□□□□ -0.16
PTPN7-208ENST00000476061 WDR17Q8IZU2 1322 aa14.08□□□□□ -0.16
PTPN7-208ENST00000476061 USP31Q70CQ4 1352 aa14.08□□□□□ -0.16
PTPN7-208ENST00000476061 CDCA7Q9BWT1 371 aaPredicted RBP14.07□□□□□ -0.16
PTPN7-208ENST00000476061 NUP188Q5SRE5 1749 aa14.07□□□□□ -0.16
PTPN7-208ENST00000476061 LTN1O94822 1766 aa14.06□□□□□ -0.16
PTPN7-208ENST00000476061 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
PTPN7-208ENST00000476061 APBA3O96018 575 aa14.06□□□□□ -0.16
PTPN7-208ENST00000476061 EZH2Q15910 746 aaKnown RBP14.06□□□□□ -0.16
PTPN7-208ENST00000476061 TOM1L2Q6ZVM7 507 aa14.06□□□□□ -0.16
PTPN7-208ENST00000476061 AXIN2Q9Y2T1 843 aa14.06□□□□□ -0.16
PTPN7-208ENST00000476061 OVOS2A0A0G2JMS6 1433 aa14.06□□□□□ -0.16
PTPN7-208ENST00000476061 OVOS2A0A0J9YW53 1432 aa14.06□□□□□ -0.16
PTPN7-208ENST00000476061 OVOS2Q6IE36 1432 aa14.06□□□□□ -0.16
PTPN7-208ENST00000476061 ZBTB7CA1YPR0 619 aa14.05□□□□□ -0.16
PTPN7-208ENST00000476061 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-208ENST00000476061 DDB1Q16531 1140 aa14.04□□□□□ -0.16
PTPN7-208ENST00000476061 BCL9O00512 1426 aa14.04□□□□□ -0.16
PTPN7-208ENST00000476061 PSDA5PKW4 1024 aaPredicted RBP14.03□□□□□ -0.16
PTPN7-208ENST00000476061 HDGFL2Q7Z4V5 671 aaPredicted RBP14.03□□□□□ -0.16
PTPN7-208ENST00000476061 CARD10Q9BWT7 1032 aa14.03□□□□□ -0.16
PTPN7-208ENST00000476061 NINLQ9Y2I6 1382 aa14.03□□□□□ -0.16
PTPN7-208ENST00000476061 EDC4Q6P2E9 1401 aaKnown RBP14.03□□□□□ -0.16
PTPN7-208ENST00000476061 CCDC7Q96M83 1385 aa14.02□□□□□ -0.17
PTPN7-208ENST00000476061 TERF2IPQ9NYB0 399 aa14.02□□□□□ -0.17
PTPN7-208ENST00000476061 R3HDM1Q15032 1099 aaKnown RBP14.01□□□□□ -0.17
PTPN7-208ENST00000476061 TMC1Q8TDI8 760 aa14.01□□□□□ -0.17
PTPN7-208ENST00000476061 SLC12A5Q9H2X9 1139 aa14.01□□□□□ -0.17
PTPN7-208ENST00000476061 A0A1W2PP64 1363 aa14□□□□□ -0.17
PTPN7-208ENST00000476061 PLSCR1O15162 318 aa14□□□□□ -0.17
PTPN7-208ENST00000476061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14□□□□□ -0.17
PTPN7-208ENST00000476061 TESK2Q96S53 571 aa14□□□□□ -0.17
PTPN7-208ENST00000476061 FAM208AQ9UK61 1670 aaKnown RBP14□□□□□ -0.17
PTPN7-208ENST00000476061 SOX12O15370 315 aa13.99□□□□□ -0.17
PTPN7-208ENST00000476061 CSB-PGBD3P0DP91 1061 aa13.99□□□□□ -0.17
PTPN7-208ENST00000476061 NBPF14Q5TI25 921 aa13.99□□□□□ -0.17
PTPN7-208ENST00000476061 NME9Q86XW9 330 aa13.99□□□□□ -0.17
PTPN7-208ENST00000476061 ERBB3P21860 1342 aa13.98□□□□□ -0.17
PTPN7-208ENST00000476061 ST20-MTHFSA0A0A6YYL1 179 aa13.98□□□□□ -0.17
PTPN7-208ENST00000476061 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
PTPN7-208ENST00000476061 EXOC5O00471 708 aa13.97□□□□□ -0.17
PTPN7-208ENST00000476061 MARCH10Q8NA82 808 aaPredicted RBP13.97□□□□□ -0.17
PTPN7-208ENST00000476061 TNS2Q63HR2 1409 aa13.97□□□□□ -0.17
PTPN7-208ENST00000476061 NHSQ6T4R5 1651 aa13.95□□□□□ -0.18
PTPN7-208ENST00000476061 TIMELESSQ9UNS1 1208 aa13.94□□□□□ -0.18
PTPN7-208ENST00000476061 ANKRD36BQ8N2N9 1353 aa13.94□□□□□ -0.18
PTPN7-208ENST00000476061 CASZ1Q86V15 1759 aa13.92□□□□□ -0.18
PTPN7-208ENST00000476061 IL2RBP14784 551 aa13.92□□□□□ -0.18
PTPN7-208ENST00000476061 TMF1P82094 1093 aa13.92□□□□□ -0.18
PTPN7-208ENST00000476061 ANKRD24Q8TF21 1146 aa13.92□□□□□ -0.18
PTPN7-208ENST00000476061 IP6K1Q92551 441 aa13.92□□□□□ -0.18
PTPN7-208ENST00000476061 NLRP2Q9NX02 1062 aa13.92□□□□□ -0.18
PTPN7-208ENST00000476061 COG3Q96JB2 828 aa13.91□□□□□ -0.18
PTPN7-208ENST00000476061 KIF20BQ96Q89 1820 aa13.91□□□□□ -0.18
PTPN7-208ENST00000476061 USP47Q96K76 1375 aa13.91□□□□□ -0.18
PTPN7-208ENST00000476061 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
PTPN7-208ENST00000476061 CDCA8Q53HL2 280 aa13.9□□□□□ -0.18
PTPN7-208ENST00000476061 PTF1AQ7RTS3 328 aa13.9□□□□□ -0.18
PTPN7-208ENST00000476061 BTAF1O14981 1849 aa13.9□□□□□ -0.18
PTPN7-208ENST00000476061 SRCAPQ6ZRS2 3230 aa13.89□□□□□ -0.19
PTPN7-208ENST00000476061 RGPD2P0DJD1 1756 aa13.89□□□□□ -0.19
PTPN7-208ENST00000476061 PROM2Q8N271 834 aa13.89□□□□□ -0.19
PTPN7-208ENST00000476061 TXNRD1Q16881 649 aa13.88□□□□□ -0.19
PTPN7-208ENST00000476061 SPON1Q9HCB6 807 aa13.88□□□□□ -0.19
PTPN7-208ENST00000476061 MYOM1P52179 1685 aa13.88□□□□□ -0.19
PTPN7-208ENST00000476061 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
PTPN7-208ENST00000476061 RTL1A6NKG5 1358 aa13.87□□□□□ -0.19
PTPN7-208ENST00000476061 KCNQ2O43526 872 aa13.87□□□□□ -0.19
PTPN7-208ENST00000476061 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
PTPN7-208ENST00000476061 FYB1O15117 783 aa13.86□□□□□ -0.19
PTPN7-208ENST00000476061 HOXC9P31274 260 aa13.86□□□□□ -0.19
PTPN7-208ENST00000476061 PAPPAQ13219 1627 aa13.86□□□□□ -0.19
PTPN7-208ENST00000476061 AMPHP49418 695 aa13.85□□□□□ -0.19
PTPN7-208ENST00000476061 ANO8Q9HCE9 1232 aaPredicted RBP13.85□□□□□ -0.19
PTPN7-208ENST00000476061 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
PTPN7-208ENST00000476061 KAT6BQ8WYB5 2073 aa13.84□□□□□ -0.19
PTPN7-208ENST00000476061 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
PTPN7-208ENST00000476061 SLC15A2Q16348 729 aa13.83□□□□□ -0.2
PTPN7-208ENST00000476061 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
PTPN7-208ENST00000476061 DOT1LQ8TEK3 1739 aa13.83□□□□□ -0.2
PTPN7-208ENST00000476061 LY75O60449 1722 aa13.82□□□□□ -0.2
PTPN7-208ENST00000476061 LTV1Q96GA3 475 aaPredicted RBP13.82□□□□□ -0.2
PTPN7-208ENST00000476061 ACSBG1Q96GR2 724 aa13.82□□□□□ -0.2
PTPN7-208ENST00000476061 GGNBP2Q9H3C7 697 aa13.82□□□□□ -0.2
PTPN7-208ENST00000476061 CGNL1Q0VF96 1302 aa13.82□□□□□ -0.2
PTPN7-208ENST00000476061 ANKRD26Q9UPS8 1709 aa13.81□□□□□ -0.2
PTPN7-208ENST00000476061 FBLN1P23142 703 aa13.81□□□□□ -0.2
PTPN7-208ENST00000476061 PPP1R1BQ9UD71 204 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-208ENST00000476061 INSRP06213 1382 aa13.81□□□□□ -0.2
PTPN7-208ENST00000476061 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
PTPN7-208ENST00000476061 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
PTPN7-208ENST00000476061 MEGF6O75095 1541 aa13.8□□□□□ -0.2
PTPN7-208ENST00000476061 RRS1Q15050 365 aaKnown RBP13.79□□□□□ -0.2
PTPN7-208ENST00000476061 ZCRB1Q8TBF4 217 aaKnown RBP13.79□□□□□ -0.2
PTPN7-208ENST00000476061 DDX54Q8TDD1 881 aaKnown RBP13.79□□□□□ -0.2
PTPN7-208ENST00000476061 FLT4P35916 1363 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms