RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	SYAP1	Q96A49	352 aa	Predicted RBP	4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	RMDN2	Q96LZ7	410 aa		4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	AGBL1	Q96MI9	1066 aa		4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	AGAP3	Q96P47	875 aa		4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	FEZ1	Q99689	392 aa		4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	SENP7	Q9BQF6	1050 aa		4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	LZTS2	Q9BRK4	669 aa		4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	CWC15	Q9P013	229 aa	Known RBP	4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	TPX2	Q9ULW0	747 aa	Known RBP	4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	DHX29	Q7Z478	1369 aa	Known RBP	4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	RAB3GAP2	Q9H2M9	1393 aa		4.65	□□□□□ -1.67
LSM2-211	ENST00000475835	MAP4K4	O95819	1239 aa	Predicted RBP	4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	BIRC2	Q13490	618 aa		4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	PDCD2	Q16342	344 aa	Predicted RBP	4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	ZSCAN26	Q16670	478 aa		4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	CATIP	Q7Z7H3	387 aa		4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	NLRP13	Q86W25	1043 aa		4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	CCDC102A	Q96A19	550 aa		4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	CHMP4C	Q96CF2	233 aa		4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	MMTAG2	Q9BU76	263 aa	Known RBP	4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	GPBP1L1	Q9HC44	474 aa	Predicted RBP	4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	ODF2L	Q9ULJ1	636 aa		4.64	□□□□□ -1.67
LSM2-211	ENST00000475835	FHAD1	B1AJZ9	1412 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	SETD5	Q9C0A6	1442 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	EFCAB5	A4FU69	1503 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	UQCRHL	A0A096LP55	91 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	RAB11FIP3	O75154	756 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	WDHD1	O75717	1129 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	UQCRH	P07919	91 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	MS4A1	P11836	297 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	TCF3	P15923	654 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	NAT1	P18440	290 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	BDNF	P23560	247 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	PAX3	P23760	479 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	GYS2	P54840	703 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	EIF5	P55010	431 aa	Known RBP	4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	PPP4C	P60510	307 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	SF3A1	Q15459	793 aa	Known RBP	4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	TSR1	Q2NL82	804 aa	Known RBP	4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	TSNAXIP1	Q2TAA8	658 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	KANK4	Q5T7N3	995 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	LMOD2	Q6P5Q4	547 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	SASS6	Q6UVJ0	657 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	FILIP1	Q7Z7B0	1213 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	FMNL3	Q8IVF7	1028 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	C17orf50	Q8WW18	174 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	PIK3R5	Q8WYR1	880 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	NOL10	Q9BSC4	688 aa	Known RBP	4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	CXorf56	Q9H5V9	222 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	WDR70	Q9NW82	654 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	FBXO9	Q9UK97	447 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	SUFU	Q9UMX1	484 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	TBC1D2B	Q9UPU7	963 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	CUL7	Q14999	1698 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	CCDC144A	A2RUR9	1427 aa		4.63	□□□□□ -1.67
LSM2-211	ENST00000475835	LRRC9	Q6ZRR7	1453 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	CC2D2A	Q9P2K1	1620 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	RGL2	O15211	777 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	HTATSF1	O43719	755 aa	Known RBP	4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	MCM5	P33992	734 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	ATP6V1A	P38606	617 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	GSC	P56915	257 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	TRAF1	Q13077	416 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	RASA3	Q14644	834 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	WWC2	Q6AWC2	1192 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	OTUD6A	Q7L8S5	288 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	ZSCAN30	Q86W11	494 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	NUTM1	Q86Y26	1132 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	IQCF2	Q8IXL9	164 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	PDCL2	Q8N4E4	241 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	BHMT	Q93088	406 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	SCYL1	Q96KG9	808 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	ZNF396	Q96N95	335 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	SPOCK3	Q9BQ16	436 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	IQCG	Q9H095	443 aa	Known RBP	4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	RASSF4	Q9H2L5	321 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	ETAA1	Q9NY74	926 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	PDZRN3	Q9UPQ7	1066 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	FYCO1	Q9BQS8	1478 aa		4.62	□□□□□ -1.67
LSM2-211	ENST00000475835	GCC2	Q8IWJ2	1684 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	TMCO5B	A8MYB1	307 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	CCDC159	P0C7I6	412 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	SKIL	P12757	684 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	SRPK2	P78362	688 aa	Known RBP	4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	CHAF1A	Q13111	956 aa	Predicted RBP	4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	PSMD2	Q13200	908 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	DCTN1	Q14203	1278 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	MCM6	Q14566	821 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	BMS1	Q14692	1282 aa	Known RBP	4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	MAP9	Q49MG5	647 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	CCDC191	Q8NCU4	936 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	TEKT1	Q969V4	418 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	RETREG1	Q9H6L5	497 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	VEZT	Q9HBM0	779 aa		4.61	□□□□□ -1.67
LSM2-211	ENST00000475835	GNL3L	Q9NVN8	582 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms