RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 RRP9O43818 475 aaKnown RBP20.25■□□□□ 0.83
TPR-205ENST00000474852 RAPGEF3O95398 923 aa20.25■□□□□ 0.83
TPR-205ENST00000474852 GSPT1P15170 499 aaKnown RBP20.25■□□□□ 0.83
TPR-205ENST00000474852 CDK19Q9BWU1 502 aa20.25■□□□□ 0.83
TPR-205ENST00000474852 MED14O60244 1454 aa20.25■□□□□ 0.83
TPR-205ENST00000474852 CD163L1Q9NR16 1453 aa20.25■□□□□ 0.83
TPR-205ENST00000474852 APBB1O00213 710 aa20.25■□□□□ 0.83
TPR-205ENST00000474852 CDC45O75419 566 aa20.25■□□□□ 0.83
TPR-205ENST00000474852 NASPP49321 788 aaPredicted RBP20.24■□□□□ 0.83
TPR-205ENST00000474852 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
TPR-205ENST00000474852 POLKQ9UBT6 870 aa20.24■□□□□ 0.83
TPR-205ENST00000474852 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
TPR-205ENST00000474852 BAG4O95429 457 aaKnown RBP20.23■□□□□ 0.83
TPR-205ENST00000474852 C16orf71Q8IYS4 520 aaPredicted RBP20.23■□□□□ 0.83
TPR-205ENST00000474852 NFE2L2Q16236 605 aa20.23■□□□□ 0.83
TPR-205ENST00000474852 TWISTNBQ3B726 338 aaPredicted RBP20.23■□□□□ 0.83
TPR-205ENST00000474852 MCTP1Q6DN14 999 aa20.23■□□□□ 0.83
TPR-205ENST00000474852 EMILIN1Q9Y6C2 1016 aa20.23■□□□□ 0.83
TPR-205ENST00000474852 PNPLA6Q8IY17 1366 aa20.23■□□□□ 0.83
TPR-205ENST00000474852 C8orf58Q8NAV2 365 aa20.22■□□□□ 0.83
TPR-205ENST00000474852 FAM83GA6ND36 823 aa20.22■□□□□ 0.83
TPR-205ENST00000474852 PKP1Q13835 747 aa20.22■□□□□ 0.83
TPR-205ENST00000474852 POGZQ7Z3K3 1410 aa20.21■□□□□ 0.83
TPR-205ENST00000474852 FAM135BQ49AJ0 1406 aa20.21■□□□□ 0.83
TPR-205ENST00000474852 DCTN1Q14203 1278 aa20.21■□□□□ 0.83
TPR-205ENST00000474852 ZNF428Q96B54 188 aa20.2■□□□□ 0.82
TPR-205ENST00000474852 CHMP4BQ9H444 224 aaKnown RBP20.2■□□□□ 0.82
TPR-205ENST00000474852 PTMSP20962 102 aa20.2■□□□□ 0.82
TPR-205ENST00000474852 GNAI1P63096 354 aa20.2■□□□□ 0.82
TPR-205ENST00000474852 PLEKHM2Q8IWE5 1019 aa20.2■□□□□ 0.82
TPR-205ENST00000474852 OTUD7AQ8TE49 926 aaPredicted RBP20.2■□□□□ 0.82
TPR-205ENST00000474852 ABCC4O15439 1325 aa20.2■□□□□ 0.82
TPR-205ENST00000474852 PTPRMP28827 1452 aa20.2■□□□□ 0.82
TPR-205ENST00000474852 BRPF1P55201 1214 aaPredicted RBP20.19■□□□□ 0.82
TPR-205ENST00000474852 CAVIN1Q6NZI2 390 aaKnown RBP20.19■□□□□ 0.82
TPR-205ENST00000474852 ARHGAP45Q92619 1136 aa20.19■□□□□ 0.82
TPR-205ENST00000474852 PTCH1Q13635 1447 aa20.19■□□□□ 0.82
TPR-205ENST00000474852 KLHL40Q2TBA0 621 aa20.19■□□□□ 0.82
TPR-205ENST00000474852 ANP32BQ92688 251 aaKnown RBP20.19■□□□□ 0.82
TPR-205ENST00000474852 CCDC173Q0VFZ6 552 aa20.18■□□□□ 0.82
TPR-205ENST00000474852 ANKRD26Q9UPS8 1709 aa20.18■□□□□ 0.82
TPR-205ENST00000474852 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
TPR-205ENST00000474852 IFT57Q9NWB7 429 aa20.17■□□□□ 0.82
TPR-205ENST00000474852 ZRANB1Q9UGI0 708 aa20.17■□□□□ 0.82
TPR-205ENST00000474852 YTHDC2Q9H6S0 1430 aaKnown RBP20.17■□□□□ 0.82
TPR-205ENST00000474852 WAPLQ7Z5K2 1190 aa20.17■□□□□ 0.82
TPR-205ENST00000474852 CHAMP1Q96JM3 812 aa20.17■□□□□ 0.82
TPR-205ENST00000474852 PIK3R4Q99570 1358 aa20.16■□□□□ 0.82
TPR-205ENST00000474852 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
TPR-205ENST00000474852 CALD1Q05682 793 aaKnown RBP20.16■□□□□ 0.82
TPR-205ENST00000474852 ZFYVE9O95405 1425 aa20.16■□□□□ 0.82
TPR-205ENST00000474852 RABEP1Q15276 862 aa20.15■□□□□ 0.82
TPR-205ENST00000474852 MLH3Q9UHC1 1453 aa20.15■□□□□ 0.82
TPR-205ENST00000474852 MYO5BQ9ULV0 1848 aa20.15■□□□□ 0.82
TPR-205ENST00000474852 PIK3C2BO00750 1634 aa20.15■□□□□ 0.82
TPR-205ENST00000474852 KRT24Q2M2I5 525 aa20.15■□□□□ 0.82
TPR-205ENST00000474852 TTC22Q5TAA0 569 aa20.15■□□□□ 0.82
TPR-205ENST00000474852 KIAA1211Q6ZU35 1233 aa20.15■□□□□ 0.82
TPR-205ENST00000474852 FOXD4L5Q5VV16 416 aaPredicted RBP20.14■□□□□ 0.82
TPR-205ENST00000474852 ZGPATQ8N5A5 531 aaKnown RBP20.14■□□□□ 0.82
TPR-205ENST00000474852 FOXD4L4Q8WXT5 416 aaPredicted RBP20.14■□□□□ 0.82
TPR-205ENST00000474852 API5Q9BZZ5 524 aaKnown RBP20.14■□□□□ 0.81
TPR-205ENST00000474852 RRS1Q15050 365 aaKnown RBP20.13■□□□□ 0.81
TPR-205ENST00000474852 NME9Q86XW9 330 aa20.13■□□□□ 0.81
TPR-205ENST00000474852 USP26Q9BXU7 913 aa20.13■□□□□ 0.81
TPR-205ENST00000474852 MSNP26038 577 aaKnown RBP20.12■□□□□ 0.81
TPR-205ENST00000474852 ZSCAN23Q3MJ62 389 aa20.12■□□□□ 0.81
TPR-205ENST00000474852 ZSCAN30Q86W11 494 aa20.12■□□□□ 0.81
TPR-205ENST00000474852 PPP1R9BQ96SB3 815 aa20.12■□□□□ 0.81
TPR-205ENST00000474852 ZNF853P0CG23 659 aa20.12■□□□□ 0.81
TPR-205ENST00000474852 CFAP44Q96MT7 982 aa20.12■□□□□ 0.81
TPR-205ENST00000474852 DCTPP1Q9H773 170 aa20.12■□□□□ 0.81
TPR-205ENST00000474852 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
TPR-205ENST00000474852 STAG3Q9UJ98 1225 aa20.12■□□□□ 0.81
TPR-205ENST00000474852 MAP2P11137 1827 aaKnown RBP20.12■□□□□ 0.81
TPR-205ENST00000474852 PRPF40AO75400 957 aaKnown RBP20.12■□□□□ 0.81
TPR-205ENST00000474852 FBXO31Q5XUX0 539 aaPredicted RBP20.12■□□□□ 0.81
TPR-205ENST00000474852 IL13P35225 146 aa20.11■□□□□ 0.81
TPR-205ENST00000474852 SLC52A1Q9NWF4 448 aa20.11■□□□□ 0.81
TPR-205ENST00000474852 KIF20BQ96Q89 1820 aa20.11■□□□□ 0.81
TPR-205ENST00000474852 SDSP20132 328 aa20.11■□□□□ 0.81
TPR-205ENST00000474852 NUCB2P80303 420 aa20.11■□□□□ 0.81
TPR-205ENST00000474852 LMBRD1Q9NUN5 540 aa20.11■□□□□ 0.81
TPR-205ENST00000474852 INTS3Q68E01 1043 aaKnown RBP20.1■□□□□ 0.81
TPR-205ENST00000474852 CLEC17AQ6ZS10 378 aa20.1■□□□□ 0.81
TPR-205ENST00000474852 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
TPR-205ENST00000474852 RBSNQ9H1K0 784 aa20.09■□□□□ 0.81
TPR-205ENST00000474852 PRIM1P49642 420 aaKnown RBP20.08■□□□□ 0.81
TPR-205ENST00000474852 CDC42BPGQ6DT37 1551 aa20.08■□□□□ 0.8
TPR-205ENST00000474852 NCKAP5LQ9HCH0 1330 aa20.08■□□□□ 0.8
TPR-205ENST00000474852 ARHGEF40Q8TER5 1519 aa20.08■□□□□ 0.8
TPR-205ENST00000474852 RIMS2Q9UQ26 1411 aa20.07■□□□□ 0.8
TPR-205ENST00000474852 ST18O60284 1047 aa20.06■□□□□ 0.8
TPR-205ENST00000474852 ZNF445P59923 1031 aa20.06■□□□□ 0.8
TPR-205ENST00000474852 IBTKQ9P2D0 1353 aaPredicted RBP20.06■□□□□ 0.8
TPR-205ENST00000474852 CYP2E1P05181 493 aaPredicted RBP20.06■□□□□ 0.8
TPR-205ENST00000474852 TPM2P07951 284 aa20.06■□□□□ 0.8
TPR-205ENST00000474852 CEP85Q6P2H3 762 aa20.06■□□□□ 0.8
TPR-205ENST00000474852 ANKRD44Q8N8A2 993 aa20.06■□□□□ 0.8
TPR-205ENST00000474852 GPT2Q8TD30 523 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms