RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
APTX-219ENST00000474658 VPS72Q15906 364 aa13.1□□□□□ -0.31
APTX-219ENST00000474658 GJD4Q96KN9 370 aaPredicted RBP13.1□□□□□ -0.31
APTX-219ENST00000474658 KIF20BQ96Q89 1820 aa13.1□□□□□ -0.31
APTX-219ENST00000474658 AATKQ6ZMQ8 1374 aa13.09□□□□□ -0.31
APTX-219ENST00000474658 LMO7Q8WWI1 1683 aa13.09□□□□□ -0.31
APTX-219ENST00000474658 CAMTA1Q9Y6Y1 1673 aa13.09□□□□□ -0.31
APTX-219ENST00000474658 EVA1CP58658 441 aa13.09□□□□□ -0.31
APTX-219ENST00000474658 STRN4Q9NRL3 753 aa13.09□□□□□ -0.31
APTX-219ENST00000474658 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
APTX-219ENST00000474658 CGNL1Q0VF96 1302 aa13.09□□□□□ -0.31
APTX-219ENST00000474658 COL18A1P39060 1754 aa13.08□□□□□ -0.32
APTX-219ENST00000474658 FBLN1P23142 703 aa13.08□□□□□ -0.32
APTX-219ENST00000474658 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
APTX-219ENST00000474658 GLI3P10071 1580 aa13.07□□□□□ -0.32
APTX-219ENST00000474658 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
APTX-219ENST00000474658 LTN1O94822 1766 aa13.06□□□□□ -0.32
APTX-219ENST00000474658 COL5A2P05997 1499 aaPredicted RBP13.05□□□□□ -0.32
APTX-219ENST00000474658 RGPD5Q99666 1765 aa13.05□□□□□ -0.32
APTX-219ENST00000474658 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
APTX-219ENST00000474658 SPATA31A5Q5VU36 1347 aa13.05□□□□□ -0.32
APTX-219ENST00000474658 SPATA31A7Q8IWB4 1347 aa13.05□□□□□ -0.32
APTX-219ENST00000474658 RGS12O14924 1447 aa13.05□□□□□ -0.32
APTX-219ENST00000474658 CDK12Q9NYV4 1490 aaPredicted RBP13.04□□□□□ -0.32
APTX-219ENST00000474658 PER1O15534 1290 aaPredicted RBP13.04□□□□□ -0.32
APTX-219ENST00000474658 RRS1Q15050 365 aaKnown RBP13.04□□□□□ -0.32
APTX-219ENST00000474658 MAP3K19Q56UN5 1328 aa13.04□□□□□ -0.32
APTX-219ENST00000474658 IP6K1Q92551 441 aa13.03□□□□□ -0.32
APTX-219ENST00000474658 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
APTX-219ENST00000474658 SPATA31A1Q5TZJ5 1347 aa13.03□□□□□ -0.32
APTX-219ENST00000474658 ABCC6O95255 1503 aa13.03□□□□□ -0.32
APTX-219ENST00000474658 ONECUT3O60422 494 aaPredicted RBP13.02□□□□□ -0.33
APTX-219ENST00000474658 AMPHP49418 695 aa13.02□□□□□ -0.33
APTX-219ENST00000474658 FAM98CQ17RN3 349 aaKnown RBP13.02□□□□□ -0.33
APTX-219ENST00000474658 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
APTX-219ENST00000474658 NSD2O96028 1365 aa13.02□□□□□ -0.33
APTX-219ENST00000474658 ANKRD26Q9UPS8 1709 aa13.02□□□□□ -0.33
APTX-219ENST00000474658 CSB-PGBD3P0DP91 1061 aa13.01□□□□□ -0.33
APTX-219ENST00000474658 HOXC9P31274 260 aa13.01□□□□□ -0.33
APTX-219ENST00000474658 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
APTX-219ENST00000474658 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
APTX-219ENST00000474658 TOM1L2Q6ZVM7 507 aa13.01□□□□□ -0.33
APTX-219ENST00000474658 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
APTX-219ENST00000474658 CRB1P82279 1406 aa13.01□□□□□ -0.33
APTX-219ENST00000474658 MORC1Q86VD1 984 aa13□□□□□ -0.33
APTX-219ENST00000474658 SEPT12Q8IYM1 358 aa13□□□□□ -0.33
APTX-219ENST00000474658 ANKRD24Q8TF21 1146 aa13□□□□□ -0.33
APTX-219ENST00000474658 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
APTX-219ENST00000474658 BLMP54132 1417 aaPredicted RBP12.99□□□□□ -0.33
APTX-219ENST00000474658 ERBB3P21860 1342 aa12.99□□□□□ -0.33
APTX-219ENST00000474658 A0A0G2JS52 829 aa12.99□□□□□ -0.33
APTX-219ENST00000474658 SOCS7O14512 581 aa12.99□□□□□ -0.33
APTX-219ENST00000474658 MYT1Q01538 1121 aa12.99□□□□□ -0.33
APTX-219ENST00000474658 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
APTX-219ENST00000474658 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
APTX-219ENST00000474658 EMILIN1Q9Y6C2 1016 aa12.99□□□□□ -0.33
APTX-219ENST00000474658 PPM1GO15355 546 aaPredicted RBP12.98□□□□□ -0.33
APTX-219ENST00000474658 CNGB1Q14028 1251 aaPredicted RBP12.98□□□□□ -0.33
APTX-219ENST00000474658 HSP90AB2PQ58FF8 381 aa12.98□□□□□ -0.33
APTX-219ENST00000474658 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
APTX-219ENST00000474658 CARD10Q9BWT7 1032 aa12.98□□□□□ -0.33
APTX-219ENST00000474658 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
APTX-219ENST00000474658 THRAP3Q9Y2W1 955 aaKnown RBP12.98□□□□□ -0.33
APTX-219ENST00000474658 PEAK1Q9H792 1746 aa12.98□□□□□ -0.33
APTX-219ENST00000474658 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
APTX-219ENST00000474658 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
APTX-219ENST00000474658 NLRP2Q9NX02 1062 aa12.97□□□□□ -0.33
APTX-219ENST00000474658 BRWD3Q6RI45 1802 aa12.97□□□□□ -0.33
APTX-219ENST00000474658 FLT4P35916 1363 aa12.96□□□□□ -0.33
APTX-219ENST00000474658 KIF24Q5T7B8 1368 aa12.96□□□□□ -0.33
APTX-219ENST00000474658 THSD7AQ9UPZ6 1657 aa12.96□□□□□ -0.34
APTX-219ENST00000474658 INSRP06213 1382 aa12.95□□□□□ -0.34
APTX-219ENST00000474658 ZBTB22O15209 634 aa12.95□□□□□ -0.34
APTX-219ENST00000474658 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
APTX-219ENST00000474658 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
APTX-219ENST00000474658 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
APTX-219ENST00000474658 RGPD2P0DJD1 1756 aa12.93□□□□□ -0.34
APTX-219ENST00000474658 FAM208AQ9UK61 1670 aaKnown RBP12.93□□□□□ -0.34
APTX-219ENST00000474658 NBPF6Q5VWK0 638 aa12.92□□□□□ -0.34
APTX-219ENST00000474658 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
APTX-219ENST00000474658 NBPF4Q96M43 638 aa12.92□□□□□ -0.34
APTX-219ENST00000474658 WNK3Q9BYP7 1800 aa12.92□□□□□ -0.34
APTX-219ENST00000474658 DISP2A7MBM2 1401 aa12.91□□□□□ -0.34
APTX-219ENST00000474658 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
APTX-219ENST00000474658 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
APTX-219ENST00000474658 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
APTX-219ENST00000474658 CDCA7Q9BWT1 371 aaPredicted RBP12.91□□□□□ -0.34
APTX-219ENST00000474658 PARP4Q9UKK3 1724 aaKnown RBP12.91□□□□□ -0.34
APTX-219ENST00000474658 IL2RBP14784 551 aa12.9□□□□□ -0.34
APTX-219ENST00000474658 MTHFSP49914 203 aa12.9□□□□□ -0.34
APTX-219ENST00000474658 DDB1Q16531 1140 aa12.9□□□□□ -0.34
APTX-219ENST00000474658 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
APTX-219ENST00000474658 ZNF316A6NFI3 1004 aaPredicted RBP12.89□□□□□ -0.35
APTX-219ENST00000474658 EXOC5O00471 708 aa12.89□□□□□ -0.35
APTX-219ENST00000474658 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
APTX-219ENST00000474658 EP400Q96L91 3159 aa12.89□□□□□ -0.35
APTX-219ENST00000474658 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
APTX-219ENST00000474658 EYA1Q99502 592 aa12.88□□□□□ -0.35
APTX-219ENST00000474658 MARCH10Q8NA82 808 aaPredicted RBP12.86□□□□□ -0.35
APTX-219ENST00000474658 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms