RNA–Protein interactions for RNA: ENST00000474387.1

AC055731.1-201, humanhuman

BASIC

Gene AC055731.1, Length 401 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055731.1-201ENST00000474387 HOXA2O43364 376 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 PPFIA4O75335 1185 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 WDHD1O75717 1129 aaPredicted RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 PAX3P23760 479 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 HSD3B2P26439 372 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 EIF4G2P78344 907 aaKnown RBP eCLIP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 FOXK1P85037 733 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 XPCQ01831 940 aaPredicted RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 OS9Q13438 667 aaPredicted RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 BMS1Q14692 1282 aaKnown RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 FAM161AQ3B820 660 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 PLEKHG6Q3KR16 790 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 VARS2Q5ST30 1063 aaKnown RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 KANK4Q5T7N3 995 aaPredicted RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 RSBN1LQ6PCB5 846 aaPredicted RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 LARP1Q6PKG0 1096 aaKnown RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 TSHZ1Q6ZSZ6 1077 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 ILDR1Q86SU0 546 aaPredicted RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 METTL3Q86U44 580 aaKnown RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 PPARGC1BQ86YN6 1023 aaKnown RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 PLPP6Q8IY26 295 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 CNPY4Q8N129 248 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 NLGN1Q8N2Q7 840 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 PRPF38AQ8NAV1 312 aaKnown RBP2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 SPIRE2Q8WWL2 714 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 MRFAP1L1Q96HT8 127 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 ASB16Q96NS5 453 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 TINF2Q9BSI4 451 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 TGIF2Q9GZN2 237 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 OSBPL2Q9H1P3 480 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 DCTN4Q9UJW0 460 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 PNMA2Q9UL42 364 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 WWC3Q9ULE0 1092 aa2.77□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L3A6NCW0 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L4A6NCW7 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L15C9J2P7 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L10C9JJH3 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L13C9JLJ4 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L12C9JPN9 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L11C9JVI0 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L21D6R901 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L18D6R9N7 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L22D6RA61 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L17D6RBQ6 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L19D6RCP7 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L20D6RJB6 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 MAP3K7O43318 606 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 LILRB3O75022 631 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 DNAJC6O75061 913 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 STK10O94804 968 aaKnown RBP2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 PRIM1P49642 420 aaKnown RBP2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 ARID5AQ03989 594 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 RAD51AP2Q09MP3 1159 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L24Q0WX57 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 FOXD4Q12950 439 aaPredicted RBP2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 ZNF211Q13398 564 aaPredicted RBP2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 COL19A1Q14993 1142 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 NFE2L2Q16236 605 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 ZNF746Q6NUN9 644 aaPredicted RBP2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 PPP1R18Q6NYC8 613 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L2Q6R6M4 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 USP17L1Q7RTZ2 530 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 FMNL3Q8IVF7 1028 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 NME8Q8N427 588 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 TSC1Q92574 1164 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 CLP1Q92989 425 aaKnown RBP2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 RNF34Q969K3 372 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 SLKQ9H2G2 1235 aaPredicted RBP2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 CDHR5Q9HBB8 845 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 PCDH12Q9NPG4 1184 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 ANO2Q9NQ90 1003 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 IFT57Q9NWB7 429 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 EGFL7Q9UHF1 273 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 TCEAL9Q9UHQ7 104 aa2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 DMGDHQ9UI17 866 aaKnown RBP2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 MRPL42Q9Y6G3 142 aaKnown RBP2.76□□□□□ -1.97
AC055731.1-201ENST00000474387 MOXD2PA6NHM9 499 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 FAM196BA6NMK8 535 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 PRC1O43663 620 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 NEFMP07197 916 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 SKIP12755 728 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 RASA1P20936 1047 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 SCNN1AP37088 669 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 APLP1P51693 650 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 TBX4P57082 545 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 RHBDL3P58872 404 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 PDE3BQ13370 1112 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 MRPL58Q14197 206 aaKnown RBP2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 ENOX2Q16206 610 aaKnown RBP2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 DOK7Q18PE1 504 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 KRBA2Q6ZNG9 492 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 JAZF1Q86VZ6 243 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 VPS37DQ86XT2 251 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 HELBQ8NG08 1087 aaPredicted RBP2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 CABLES1Q8TDN4 633 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 PNISRQ8TF01 805 aaKnown RBP2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 JDP2Q8WYK2 163 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 EVI5LQ96CN4 794 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 RPS6KC1Q96S38 1066 aa2.75□□□□□ -1.97
AC055731.1-201ENST00000474387 IRF2BPLQ9H1B7 796 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms