RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 FAM98CQ17RN3 349 aaKnown RBP18.22■□□□□ 0.51
TPM3-216ENST00000473036 SPATA31A5Q5VU36 1347 aa18.22■□□□□ 0.51
TPM3-216ENST00000473036 SPATA31A7Q8IWB4 1347 aa18.22■□□□□ 0.51
TPM3-216ENST00000473036 CAMTA1Q9Y6Y1 1673 aa18.22■□□□□ 0.51
TPM3-216ENST00000473036 FYB1O15117 783 aa18.21■□□□□ 0.51
TPM3-216ENST00000473036 PRDM11Q9NQV5 511 aa18.21■□□□□ 0.51
TPM3-216ENST00000473036 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
TPM3-216ENST00000473036 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
TPM3-216ENST00000473036 SOX12O15370 315 aa18.2■□□□□ 0.5
TPM3-216ENST00000473036 FBLN1P23142 703 aa18.2■□□□□ 0.5
TPM3-216ENST00000473036 KIF20BQ96Q89 1820 aa18.2■□□□□ 0.5
TPM3-216ENST00000473036 RGPD5Q99666 1765 aa18.19■□□□□ 0.5
TPM3-216ENST00000473036 PARD3Q8TEW0 1356 aa18.19■□□□□ 0.5
TPM3-216ENST00000473036 ARHGEF25Q86VW2 580 aa18.19■□□□□ 0.5
TPM3-216ENST00000473036 PANK3Q9H999 370 aa18.19■□□□□ 0.5
TPM3-216ENST00000473036 THSD7AQ9UPZ6 1657 aa18.18■□□□□ 0.5
TPM3-216ENST00000473036 CCDC7Q96M83 1385 aa18.18■□□□□ 0.5
TPM3-216ENST00000473036 GGNBP2Q9H3C7 697 aa18.18■□□□□ 0.5
TPM3-216ENST00000473036 AXIN2Q9Y2T1 843 aa18.18■□□□□ 0.5
TPM3-216ENST00000473036 LTN1O94822 1766 aa18.17■□□□□ 0.5
TPM3-216ENST00000473036 PSDA5PKW4 1024 aaPredicted RBP18.16■□□□□ 0.5
TPM3-216ENST00000473036 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
TPM3-216ENST00000473036 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
TPM3-216ENST00000473036 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
TPM3-216ENST00000473036 ZBTB7CA1YPR0 619 aa18.14■□□□□ 0.49
TPM3-216ENST00000473036 KCNH5Q8NCM2 988 aa18.14■□□□□ 0.49
TPM3-216ENST00000473036 COL5A2P05997 1499 aaPredicted RBP18.14■□□□□ 0.49
TPM3-216ENST00000473036 TNS1Q9HBL0 1735 aaKnown RBP18.13■□□□□ 0.49
TPM3-216ENST00000473036 SPATA31A1Q5TZJ5 1347 aa18.13■□□□□ 0.49
TPM3-216ENST00000473036 COG3Q96JB2 828 aa18.12■□□□□ 0.49
TPM3-216ENST00000473036 R3HDM1Q15032 1099 aaKnown RBP18.11■□□□□ 0.49
TPM3-216ENST00000473036 LARP1Q6PKG0 1096 aaKnown RBP18.11■□□□□ 0.49
TPM3-216ENST00000473036 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
TPM3-216ENST00000473036 ANKRD26Q9UPS8 1709 aa18.1■□□□□ 0.49
TPM3-216ENST00000473036 PER1O15534 1290 aaPredicted RBP18.1■□□□□ 0.49
TPM3-216ENST00000473036 CAMKK2Q96RR4 588 aa18.1■□□□□ 0.49
TPM3-216ENST00000473036 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
TPM3-216ENST00000473036 BARGINQ6ZT62 677 aa18.09■□□□□ 0.49
TPM3-216ENST00000473036 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
TPM3-216ENST00000473036 RRS1Q15050 365 aaKnown RBP18.08■□□□□ 0.48
TPM3-216ENST00000473036 ABCC6O95255 1503 aa18.08■□□□□ 0.48
TPM3-216ENST00000473036 CGNL1Q0VF96 1302 aa18.07■□□□□ 0.48
TPM3-216ENST00000473036 AMER1Q5JTC6 1135 aaPredicted RBP18.07■□□□□ 0.48
TPM3-216ENST00000473036 EZH2Q15910 746 aaKnown RBP18.06■□□□□ 0.48
TPM3-216ENST00000473036 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
TPM3-216ENST00000473036 TRIM37O94972 964 aa18.05■□□□□ 0.48
TPM3-216ENST00000473036 EVA1CP58658 441 aa18.05■□□□□ 0.48
TPM3-216ENST00000473036 FAM182BQ5T319 152 aa18.05■□□□□ 0.48
TPM3-216ENST00000473036 THRAP3Q9Y2W1 955 aaKnown RBP18.05■□□□□ 0.48
TPM3-216ENST00000473036 APBA3O96018 575 aa18.04■□□□□ 0.48
TPM3-216ENST00000473036 PDE3BQ13370 1112 aa18.04■□□□□ 0.48
TPM3-216ENST00000473036 NBPF14Q5TI25 921 aa18.04■□□□□ 0.48
TPM3-216ENST00000473036 IP6K1Q92551 441 aa18.04■□□□□ 0.48
TPM3-216ENST00000473036 WDR17Q8IZU2 1322 aa18.03■□□□□ 0.48
TPM3-216ENST00000473036 HOXC9P31274 260 aa18.03■□□□□ 0.48
TPM3-216ENST00000473036 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
TPM3-216ENST00000473036 RGPD2P0DJD1 1756 aa18.03■□□□□ 0.48
TPM3-216ENST00000473036 CRB1P82279 1406 aa18.03■□□□□ 0.48
TPM3-216ENST00000473036 RREB1Q92766 1687 aa18.03■□□□□ 0.48
TPM3-216ENST00000473036 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.48
TPM3-216ENST00000473036 ERBB3P21860 1342 aa18.01■□□□□ 0.47
TPM3-216ENST00000473036 TCP11L2Q8N4U5 519 aa18.01■□□□□ 0.47
TPM3-216ENST00000473036 ANKRD24Q8TF21 1146 aa18.01■□□□□ 0.47
TPM3-216ENST00000473036 KNSTRNQ9Y448 316 aa18.01■□□□□ 0.47
TPM3-216ENST00000473036 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
TPM3-216ENST00000473036 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
TPM3-216ENST00000473036 POLKQ9UBT6 870 aa18■□□□□ 0.47
TPM3-216ENST00000473036 NSD2O96028 1365 aa18■□□□□ 0.47
TPM3-216ENST00000473036 HSP90AB2PQ58FF8 381 aa17.99■□□□□ 0.47
TPM3-216ENST00000473036 TOM1L2Q6ZVM7 507 aa17.99■□□□□ 0.47
TPM3-216ENST00000473036 AMPHP49418 695 aa17.98■□□□□ 0.47
TPM3-216ENST00000473036 CARD10Q9BWT7 1032 aa17.98■□□□□ 0.47
TPM3-216ENST00000473036 RTL1A6NKG5 1358 aa17.98■□□□□ 0.47
TPM3-216ENST00000473036 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
TPM3-216ENST00000473036 LTV1Q96GA3 475 aaPredicted RBP17.97■□□□□ 0.47
TPM3-216ENST00000473036 SPON1Q9HCB6 807 aa17.97■□□□□ 0.47
TPM3-216ENST00000473036 NUP188Q5SRE5 1749 aa17.97■□□□□ 0.47
TPM3-216ENST00000473036 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
TPM3-216ENST00000473036 PARP4Q9UKK3 1724 aaKnown RBP17.96■□□□□ 0.47
TPM3-216ENST00000473036 CC2D1BQ5T0F9 858 aaKnown RBP17.96■□□□□ 0.47
TPM3-216ENST00000473036 INSRP06213 1382 aa17.95■□□□□ 0.46
TPM3-216ENST00000473036 FLT4P35916 1363 aa17.95■□□□□ 0.46
TPM3-216ENST00000473036 RGPD3A6NKT7 1758 aaPredicted RBP17.95■□□□□ 0.46
TPM3-216ENST00000473036 RGPD4Q7Z3J3 1758 aa17.95■□□□□ 0.46
TPM3-216ENST00000473036 CSB-PGBD3P0DP91 1061 aa17.95■□□□□ 0.46
TPM3-216ENST00000473036 YY1P25490 414 aa17.95■□□□□ 0.46
TPM3-216ENST00000473036 MORC1Q86VD1 984 aa17.95■□□□□ 0.46
TPM3-216ENST00000473036 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
TPM3-216ENST00000473036 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
TPM3-216ENST00000473036 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
TPM3-216ENST00000473036 NPC1L1Q9UHC9 1359 aa17.93■□□□□ 0.46
TPM3-216ENST00000473036 PLSCR1O15162 318 aa17.93■□□□□ 0.46
TPM3-216ENST00000473036 OVOS2A0A0G2JMS6 1433 aa17.92■□□□□ 0.46
TPM3-216ENST00000473036 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
TPM3-216ENST00000473036 KCNQ2O43526 872 aa17.92■□□□□ 0.46
TPM3-216ENST00000473036 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
TPM3-216ENST00000473036 NBPF6Q5VWK0 638 aa17.92■□□□□ 0.46
TPM3-216ENST00000473036 NBPF4Q96M43 638 aa17.92■□□□□ 0.46
TPM3-216ENST00000473036 NLRP2Q9NX02 1062 aa17.92■□□□□ 0.46
TPM3-216ENST00000473036 PPP1R1BQ9UD71 204 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms