RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CCDC7Q96M83 1385 aa13.28□□□□□ -0.28
APTX-216ENST00000472896 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
APTX-216ENST00000472896 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
APTX-216ENST00000472896 KCNA4P22459 653 aa13.27□□□□□ -0.28
APTX-216ENST00000472896 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.28
APTX-216ENST00000472896 GLIPR1L2Q4G1C9 344 aa13.27□□□□□ -0.28
APTX-216ENST00000472896 NBPF14Q5TI25 921 aa13.27□□□□□ -0.28
APTX-216ENST00000472896 KCNQ2O43526 872 aa13.27□□□□□ -0.29
APTX-216ENST00000472896 PDE3BQ13370 1112 aa13.27□□□□□ -0.29
APTX-216ENST00000472896 BARGINQ6ZT62 677 aa13.27□□□□□ -0.29
APTX-216ENST00000472896 SPON1Q9HCB6 807 aa13.27□□□□□ -0.29
APTX-216ENST00000472896 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
APTX-216ENST00000472896 RREB1Q92766 1687 aa13.26□□□□□ -0.29
APTX-216ENST00000472896 NUP188Q5SRE5 1749 aa13.26□□□□□ -0.29
APTX-216ENST00000472896 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
APTX-216ENST00000472896 EVA1CP58658 441 aa13.25□□□□□ -0.29
APTX-216ENST00000472896 BACH2Q9BYV9 841 aa13.25□□□□□ -0.29
APTX-216ENST00000472896 PPP1R1BQ9UD71 204 aaPredicted RBP13.25□□□□□ -0.29
APTX-216ENST00000472896 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
APTX-216ENST00000472896 PDE4AP27815 886 aa13.25□□□□□ -0.29
APTX-216ENST00000472896 PKNOX2Q96KN3 472 aa13.25□□□□□ -0.29
APTX-216ENST00000472896 ADGRB1O14514 1584 aa13.24□□□□□ -0.29
APTX-216ENST00000472896 BRPF3Q9ULD4 1205 aa13.24□□□□□ -0.29
APTX-216ENST00000472896 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
APTX-216ENST00000472896 NUDT16Q96DE0 195 aaKnown RBP13.23□□□□□ -0.29
APTX-216ENST00000472896 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
APTX-216ENST00000472896 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
APTX-216ENST00000472896 PDGFDQ9GZP0 370 aaPredicted RBP13.22□□□□□ -0.29
APTX-216ENST00000472896 CAMTA1Q9Y6Y1 1673 aa13.22□□□□□ -0.29
APTX-216ENST00000472896 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
APTX-216ENST00000472896 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
APTX-216ENST00000472896 EIF3AQ14152 1382 aaKnown RBP13.21□□□□□ -0.29
APTX-216ENST00000472896 NINLQ9Y2I6 1382 aa13.21□□□□□ -0.3
APTX-216ENST00000472896 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
APTX-216ENST00000472896 NPM2Q86SE8 214 aaKnown RBP13.2□□□□□ -0.3
APTX-216ENST00000472896 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
APTX-216ENST00000472896 PHRF1Q9P1Y6 1649 aaKnown RBP13.19□□□□□ -0.3
APTX-216ENST00000472896 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
APTX-216ENST00000472896 ACEP12821 1306 aa13.18□□□□□ -0.3
APTX-216ENST00000472896 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
APTX-216ENST00000472896 NFKBIBQ15653 356 aa13.18□□□□□ -0.3
APTX-216ENST00000472896 PROM2Q8N271 834 aa13.18□□□□□ -0.3
APTX-216ENST00000472896 ZNF784Q8NCA9 323 aaPredicted RBP13.18□□□□□ -0.3
APTX-216ENST00000472896 ATP7BP35670 1465 aa13.18□□□□□ -0.3
APTX-216ENST00000472896 PLSCR1O15162 318 aa13.17□□□□□ -0.3
APTX-216ENST00000472896 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
APTX-216ENST00000472896 DCAF11Q8TEB1 546 aa13.17□□□□□ -0.3
APTX-216ENST00000472896 FRAT1Q92837 279 aaPredicted RBP13.17□□□□□ -0.3
APTX-216ENST00000472896 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
APTX-216ENST00000472896 POLR3AO14802 1390 aaPredicted RBP13.16□□□□□ -0.3
APTX-216ENST00000472896 CPDO75976 1380 aa13.16□□□□□ -0.3
APTX-216ENST00000472896 ZBTB7AO95365 584 aa13.16□□□□□ -0.3
APTX-216ENST00000472896 PTGER2P43116 358 aa13.16□□□□□ -0.3
APTX-216ENST00000472896 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
APTX-216ENST00000472896 USP19O94966 1318 aa13.15□□□□□ -0.3
APTX-216ENST00000472896 PLEKHG3A1L390 1219 aa13.15□□□□□ -0.3
APTX-216ENST00000472896 GCP02774 474 aa13.15□□□□□ -0.3
APTX-216ENST00000472896 LMO7Q8WWI1 1683 aa13.15□□□□□ -0.3
APTX-216ENST00000472896 RRP1P56182 461 aaKnown RBP13.15□□□□□ -0.31
APTX-216ENST00000472896 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
APTX-216ENST00000472896 CASZ1Q86V15 1759 aa13.14□□□□□ -0.31
APTX-216ENST00000472896 NRKQ7Z2Y5 1582 aa13.14□□□□□ -0.31
APTX-216ENST00000472896 PEAK1Q9H792 1746 aa13.14□□□□□ -0.31
APTX-216ENST00000472896 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
APTX-216ENST00000472896 COL5A2P05997 1499 aaPredicted RBP13.12□□□□□ -0.31
APTX-216ENST00000472896 PARP4Q9UKK3 1724 aaKnown RBP13.12□□□□□ -0.31
APTX-216ENST00000472896 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
APTX-216ENST00000472896 SBF2Q86WG5 1849 aa13.12□□□□□ -0.31
APTX-216ENST00000472896 ZBTB7CA1YPR0 619 aa13.12□□□□□ -0.31
APTX-216ENST00000472896 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
APTX-216ENST00000472896 MARCH10Q8NA82 808 aaPredicted RBP13.12□□□□□ -0.31
APTX-216ENST00000472896 SYT17Q9BSW7 474 aa13.12□□□□□ -0.31
APTX-216ENST00000472896 ITSN1Q15811 1721 aa13.11□□□□□ -0.31
APTX-216ENST00000472896 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
APTX-216ENST00000472896 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
APTX-216ENST00000472896 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
APTX-216ENST00000472896 FHDC1Q9C0D6 1143 aaPredicted RBP13.11□□□□□ -0.31
APTX-216ENST00000472896 CRB1P82279 1406 aa13.1□□□□□ -0.31
APTX-216ENST00000472896 SENP3-EIF4A1A0A087X0R7 540 aa13.1□□□□□ -0.31
APTX-216ENST00000472896 DDB1Q16531 1140 aa13.1□□□□□ -0.31
APTX-216ENST00000472896 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
APTX-216ENST00000472896 MYOM1P52179 1685 aa13.1□□□□□ -0.31
APTX-216ENST00000472896 KTN1Q86UP2 1357 aaKnown RBP13.09□□□□□ -0.31
APTX-216ENST00000472896 C1QTNF8P60827 252 aa13.09□□□□□ -0.31
APTX-216ENST00000472896 TXNRD1Q16881 649 aa13.09□□□□□ -0.31
APTX-216ENST00000472896 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
APTX-216ENST00000472896 AXIN2Q9Y2T1 843 aa13.09□□□□□ -0.31
APTX-216ENST00000472896 EXOC6Q8TAG9 804 aa13.08□□□□□ -0.32
APTX-216ENST00000472896 TOPAZ1Q8N9V7 1692 aa13.08□□□□□ -0.32
APTX-216ENST00000472896 RGPD3A6NKT7 1758 aaPredicted RBP13.07□□□□□ -0.32
APTX-216ENST00000472896 RGPD4Q7Z3J3 1758 aa13.07□□□□□ -0.32
APTX-216ENST00000472896 SLC15A2Q16348 729 aa13.07□□□□□ -0.32
APTX-216ENST00000472896 TOM1L2Q6ZVM7 507 aa13.07□□□□□ -0.32
APTX-216ENST00000472896 PNISRQ8TF01 805 aaKnown RBP13.07□□□□□ -0.32
APTX-216ENST00000472896 STK32BQ9NY57 414 aa13.07□□□□□ -0.32
APTX-216ENST00000472896 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
APTX-216ENST00000472896 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
APTX-216ENST00000472896 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
APTX-216ENST00000472896 STAC3Q96MF2 364 aa13.07□□□□□ -0.32
APTX-216ENST00000472896 LRRC37A3O60309 1634 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms