RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 FOXJ1Q92949 421 aa11.08□□□□□ -0.64
RFXAP-202ENST00000472888 CDK15Q96Q40 435 aa11.07□□□□□ -0.64
RFXAP-202ENST00000472888 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
RFXAP-202ENST00000472888 PTK2Q05397 1052 aa11.06□□□□□ -0.64
RFXAP-202ENST00000472888 MAGEB6P1A0A0J9YX57 407 aa11.05□□□□□ -0.64
RFXAP-202ENST00000472888 NR3C2P08235 984 aa11.05□□□□□ -0.64
RFXAP-202ENST00000472888 KCNMA1Q12791 1236 aa11.05□□□□□ -0.64
RFXAP-202ENST00000472888 GPSM3Q9Y4H4 160 aa11.05□□□□□ -0.64
RFXAP-202ENST00000472888 ARID5BQ14865 1188 aa11.04□□□□□ -0.64
RFXAP-202ENST00000472888 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
RFXAP-202ENST00000472888 ITPKCQ96DU7 683 aa11.04□□□□□ -0.64
RFXAP-202ENST00000472888 ARHGAP9Q9BRR9 750 aa11.04□□□□□ -0.64
RFXAP-202ENST00000472888 HMX1Q9NP08 348 aaPredicted RBP11.04□□□□□ -0.64
RFXAP-202ENST00000472888 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
RFXAP-202ENST00000472888 ZBTB33Q86T24 672 aa11.03□□□□□ -0.64
RFXAP-202ENST00000472888 PRM3Q9NNZ6 103 aa11.03□□□□□ -0.64
RFXAP-202ENST00000472888 SOCS7O14512 581 aa11.02□□□□□ -0.65
RFXAP-202ENST00000472888 ZIC2O95409 532 aaPredicted RBP11.02□□□□□ -0.65
RFXAP-202ENST00000472888 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.65
RFXAP-202ENST00000472888 SH3RF1Q7Z6J0 888 aa11.02□□□□□ -0.65
RFXAP-202ENST00000472888 CARD14Q9BXL6 1004 aa11.02□□□□□ -0.65
RFXAP-202ENST00000472888 GRM5P41594 1212 aa11.01□□□□□ -0.65
RFXAP-202ENST00000472888 EPS8L1Q8TE68 723 aa11.01□□□□□ -0.65
RFXAP-202ENST00000472888 KRT76Q01546 638 aa11□□□□□ -0.65
RFXAP-202ENST00000472888 C6orf118Q5T5N4 469 aa11□□□□□ -0.65
RFXAP-202ENST00000472888 KCTD17Q8N5Z5 321 aa11□□□□□ -0.65
RFXAP-202ENST00000472888 MAN1A2O60476 641 aa10.99□□□□□ -0.65
RFXAP-202ENST00000472888 CDV3Q9UKY7 258 aaKnown RBP10.99□□□□□ -0.65
RFXAP-202ENST00000472888 NR5A1Q13285 461 aa10.98□□□□□ -0.65
RFXAP-202ENST00000472888 TMEM132AQ24JP5 1023 aa10.98□□□□□ -0.65
RFXAP-202ENST00000472888 TRMT44Q8IYL2 757 aaKnown RBP10.98□□□□□ -0.65
RFXAP-202ENST00000472888 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
RFXAP-202ENST00000472888 C1QTNF2Q9BXJ5 285 aa10.98□□□□□ -0.65
RFXAP-202ENST00000472888 TRIM34Q9BYJ4 488 aa10.98□□□□□ -0.65
RFXAP-202ENST00000472888 VASH1Q7L8A9 365 aaPredicted RBP10.97□□□□□ -0.65
RFXAP-202ENST00000472888 MEIOBQ8N635 442 aa10.97□□□□□ -0.65
RFXAP-202ENST00000472888 DNMT3LQ9UJW3 386 aa10.97□□□□□ -0.65
RFXAP-202ENST00000472888 NDUFB9Q9Y6M9 179 aa10.97□□□□□ -0.65
RFXAP-202ENST00000472888 SOS2Q07890 1332 aaPredicted RBP10.96□□□□□ -0.65
RFXAP-202ENST00000472888 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
RFXAP-202ENST00000472888 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
RFXAP-202ENST00000472888 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
RFXAP-202ENST00000472888 GJD4Q96KN9 370 aaPredicted RBP10.96□□□□□ -0.65
RFXAP-202ENST00000472888 MAP4K5Q9Y4K4 846 aa10.96□□□□□ -0.65
RFXAP-202ENST00000472888 SNRKQ9NRH2 765 aa10.95□□□□□ -0.66
RFXAP-202ENST00000472888 MTMR14Q8NCE2 650 aa10.94□□□□□ -0.66
RFXAP-202ENST00000472888 ADAM32Q8TC27 787 aa10.94□□□□□ -0.66
RFXAP-202ENST00000472888 BMP2P12643 396 aa10.93□□□□□ -0.66
RFXAP-202ENST00000472888 ZNF592Q92610 1267 aa10.93□□□□□ -0.66
RFXAP-202ENST00000472888 ZNF330Q9Y3S2 320 aaPredicted RBP10.93□□□□□ -0.66
RFXAP-202ENST00000472888 ZBBXA8MT70 800 aa10.92□□□□□ -0.66
RFXAP-202ENST00000472888 DZIP3Q86Y13 1208 aaKnown RBP10.92□□□□□ -0.66
RFXAP-202ENST00000472888 FSHRP23945 695 aa10.91□□□□□ -0.66
RFXAP-202ENST00000472888 NBPF20Q3BBV1 942 aa10.91□□□□□ -0.66
RFXAP-202ENST00000472888 RASSF7Q02833 373 aa10.9□□□□□ -0.66
RFXAP-202ENST00000472888 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
RFXAP-202ENST00000472888 TMEM151AQ8N4L1 468 aa10.89□□□□□ -0.67
RFXAP-202ENST00000472888 KCTD15Q96SI1 283 aaPredicted RBP10.89□□□□□ -0.67
RFXAP-202ENST00000472888 MCCD1P59942 119 aaPredicted RBP10.88□□□□□ -0.67
RFXAP-202ENST00000472888 DHX9Q08211 1270 aaKnown RBP10.88□□□□□ -0.67
RFXAP-202ENST00000472888 CCDC116Q8IYX3 515 aa10.88□□□□□ -0.67
RFXAP-202ENST00000472888 CNTNAP3BQ96NU0 1288 aa10.88□□□□□ -0.67
RFXAP-202ENST00000472888 CNTNAP3Q9BZ76 1288 aa10.88□□□□□ -0.67
RFXAP-202ENST00000472888 ADAMTS8Q9UP79 889 aa10.88□□□□□ -0.67
RFXAP-202ENST00000472888 EMILIN1Q9Y6C2 1016 aa10.88□□□□□ -0.67
RFXAP-202ENST00000472888 GDF11O95390 407 aa10.87□□□□□ -0.67
RFXAP-202ENST00000472888 OCSTAMPQ9BR26 566 aa10.87□□□□□ -0.67
RFXAP-202ENST00000472888 UPP2O95045 317 aa10.86□□□□□ -0.67
RFXAP-202ENST00000472888 NR1H3Q13133 447 aa10.86□□□□□ -0.67
RFXAP-202ENST00000472888 PGPEP1Q9NXJ5 209 aa10.86□□□□□ -0.67
RFXAP-202ENST00000472888 FBXO45P0C2W1 286 aa10.85□□□□□ -0.67
RFXAP-202ENST00000472888 FLIIQ13045 1269 aa10.85□□□□□ -0.67
RFXAP-202ENST00000472888 PCDHB9Q9Y5E1 797 aa10.85□□□□□ -0.67
RFXAP-202ENST00000472888 PTSQ03393 145 aa10.84□□□□□ -0.67
RFXAP-202ENST00000472888 RNFT1Q5M7Z0 435 aa10.84□□□□□ -0.67
RFXAP-202ENST00000472888 ZNF385CQ66K41 422 aaPredicted RBP10.84□□□□□ -0.67
RFXAP-202ENST00000472888 MCM6Q14566 821 aa10.83□□□□□ -0.68
RFXAP-202ENST00000472888 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.83□□□□□ -0.68
RFXAP-202ENST00000472888 NANOS1Q8WY41 292 aaKnown RBP10.83□□□□□ -0.68
RFXAP-202ENST00000472888 TSEN34Q9BSV6 310 aaKnown RBP10.83□□□□□ -0.68
RFXAP-202ENST00000472888 COL25A1Q9BXS0 654 aaPredicted RBP10.83□□□□□ -0.68
RFXAP-202ENST00000472888 TBC1D2BQ9UPU7 963 aa10.83□□□□□ -0.68
RFXAP-202ENST00000472888 TTLL8A6PVC2 850 aa10.82□□□□□ -0.68
RFXAP-202ENST00000472888 CCDC125Q86Z20 511 aa10.82□□□□□ -0.68
RFXAP-202ENST00000472888 WWC1Q8IX03 1113 aa10.82□□□□□ -0.68
RFXAP-202ENST00000472888 PPP1R26Q5T8A7 1209 aaPredicted RBP10.81□□□□□ -0.68
RFXAP-202ENST00000472888 SEPT12Q8IYM1 358 aa10.81□□□□□ -0.68
RFXAP-202ENST00000472888 RAD21O60216 631 aa10.8□□□□□ -0.68
RFXAP-202ENST00000472888 RNF20Q5VTR2 975 aa10.8□□□□□ -0.68
RFXAP-202ENST00000472888 WHAMMQ8TF30 809 aa10.8□□□□□ -0.68
RFXAP-202ENST00000472888 ABL2P42684 1182 aa10.79□□□□□ -0.68
RFXAP-202ENST00000472888 RAB15P59190 212 aa10.79□□□□□ -0.68
RFXAP-202ENST00000472888 EIF4G2P78344 907 aaKnown RBP eCLIP10.79□□□□□ -0.68
RFXAP-202ENST00000472888 WASHC4Q2M389 1173 aa10.79□□□□□ -0.68
RFXAP-202ENST00000472888 INTS6LQ5JSJ4 861 aaKnown RBP10.79□□□□□ -0.68
RFXAP-202ENST00000472888 GDPD2Q9HCC8 539 aa10.79□□□□□ -0.68
RFXAP-202ENST00000472888 RNF225M0QZC1 329 aaPredicted RBP10.78□□□□□ -0.68
RFXAP-202ENST00000472888 ARHGEF15O94989 841 aa10.78□□□□□ -0.68
RFXAP-202ENST00000472888 Q6ZVU0 165 aa10.78□□□□□ -0.68
RFXAP-202ENST00000472888 CCDC155Q8N6L0 562 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms