RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 IGHDP01880 384 aa6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 DCTN1Q14203 1278 aa6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 NFE2L2Q16236 605 aa6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 SULT6B1Q6IMI4 303 aa6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 FTSJ3Q8IY81 847 aaKnown RBP6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 FAM83GA6ND36 823 aa6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 EIF4A2Q14240 407 aaKnown RBP6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 NCBP3Q53F19 620 aaKnown RBP6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 AEBP1Q8IUX7 1158 aa6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 SSH1Q8WYL5 1049 aa6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 KDM2BQ8NHM5 1336 aa6.25□□□□□ -1.41
TM4SF1-202ENST00000472441 NLRP6P59044 892 aa6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 ITSN1Q15811 1721 aa6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 ZKSCAN2Q63HK3 967 aa6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 AATKQ6ZMQ8 1374 aa6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 ADGRB2O60241 1585 aa6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 LRRC7Q96NW7 1537 aa6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 USP6P35125 1406 aa6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 ANP32AP39687 249 aaKnown RBP6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 AMPHP49418 695 aa6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 POTEHQ6S545 545 aa6.24□□□□□ -1.41
TM4SF1-202ENST00000472441 DZIP1LQ8IYY4 767 aaKnown RBP6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 NOB1Q9ULX3 412 aaKnown RBP6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 XIRP1Q702N8 1843 aaKnown RBP6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 IL16Q14005 1332 aa6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 MON2Q7Z3U7 1717 aa6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 ABTB2Q8N961 1025 aa6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 AKAP12Q02952 1782 aa6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 MS4A1P11836 297 aa6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 ITPRIPQ8IWB1 547 aa6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 LTV1Q96GA3 475 aaPredicted RBP6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 BACH2Q9BYV9 841 aa6.23□□□□□ -1.41
TM4SF1-202ENST00000472441 STRCP1A6NGW2 1772 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 RGPD8O14715 1765 aaPredicted RBP6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 MAP3K19Q56UN5 1328 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 CT47B1P0C2W7 299 aaPredicted RBP6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 TSPYL6Q8N831 410 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 PCDHB15Q9Y5E8 787 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 CDK12Q9NYV4 1490 aaPredicted RBP6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 TRIM27P14373 513 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 GNAI1P63096 354 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 CALD1Q05682 793 aaKnown RBP6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 ESCO1Q5FWF5 840 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 ANP32EQ9BTT0 268 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 MBIPQ9NS73 344 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 PTCH1Q13635 1447 aa6.22□□□□□ -1.41
TM4SF1-202ENST00000472441 TTC21AQ8NDW8 1320 aa6.21□□□□□ -1.41
TM4SF1-202ENST00000472441 MVPQ14764 893 aaKnown RBP6.21□□□□□ -1.41
TM4SF1-202ENST00000472441 LMOD2Q6P5Q4 547 aa6.21□□□□□ -1.41
TM4SF1-202ENST00000472441 ATF7IPQ6VMQ6 1270 aa6.21□□□□□ -1.41
TM4SF1-202ENST00000472441 MCM10Q7L590 875 aa6.21□□□□□ -1.41
TM4SF1-202ENST00000472441 XPCQ01831 940 aaPredicted RBP6.21□□□□□ -1.42
TM4SF1-202ENST00000472441 PSME1Q06323 249 aa6.21□□□□□ -1.42
TM4SF1-202ENST00000472441 LMOD3Q0VAK6 560 aa6.21□□□□□ -1.42
TM4SF1-202ENST00000472441 PHF8Q9UPP1 1060 aa6.21□□□□□ -1.42
TM4SF1-202ENST00000472441 OVOS2A0A0J9YW53 1432 aa6.21□□□□□ -1.42
TM4SF1-202ENST00000472441 OVOS2Q6IE36 1432 aa6.21□□□□□ -1.42
TM4SF1-202ENST00000472441 IPO8O15397 1037 aaKnown RBP6.21□□□□□ -1.42
TM4SF1-202ENST00000472441 TMEM57Q8N5G2 664 aa6.21□□□□□ -1.42
TM4SF1-202ENST00000472441 LTBP4Q8N2S1 1624 aa6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 FOXO3O43524 673 aa6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 VAMP4O75379 141 aa6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 TWISTNBQ3B726 338 aaPredicted RBP6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 C8orf58Q8NAV2 365 aa6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 IFT57Q9NWB7 429 aa6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 CFAP44Q96MT7 982 aa6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 IPO9Q96P70 1041 aaKnown RBP6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 RWDD1Q9H446 243 aaPredicted RBP6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 MIS18AQ9NYP9 233 aa6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 ZBTB47Q9UFB7 747 aaPredicted RBP6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 PIK3R4Q99570 1358 aa6.2□□□□□ -1.42
TM4SF1-202ENST00000472441 KRT24Q2M2I5 525 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 EYA1Q99502 592 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 TOPAZ1Q8N9V7 1692 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 KIF16BQ96L93 1317 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 SSH2Q76I76 1423 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 USP31Q70CQ4 1352 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 ALDH1L2Q3SY69 923 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 PROSER2Q86WR7 435 aaPredicted RBP6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 RTF1Q92541 710 aaKnown RBP6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 DDX19BQ9UMR2 479 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 NOP58Q9Y2X3 529 aaKnown RBP6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 ZNF853P0CG23 659 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 MTHFSDQ2M296 383 aaKnown RBP6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 FAM161AQ3B820 660 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 ORAI2Q96SN7 254 aa6.19□□□□□ -1.42
TM4SF1-202ENST00000472441 NCOA3Q9Y6Q9 1424 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 NRKQ7Z2Y5 1582 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 FLT4P35916 1363 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 MRPL50Q8N5N7 158 aaKnown RBP6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 USHBP1Q8N6Y0 703 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 ZNF428Q96B54 188 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 PDZRN3Q9UPQ7 1066 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 SBNO1A3KN83 1393 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 DLG5Q8TDM6 1919 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 HOXC9P31274 260 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 AAMPQ13685 434 aa6.18□□□□□ -1.42
TM4SF1-202ENST00000472441 NPHP4O75161 1426 aaPredicted RBP6.17□□□□□ -1.42
TM4SF1-202ENST00000472441 C8orf34Q49A92 452 aa6.17□□□□□ -1.42
TM4SF1-202ENST00000472441 PEAK1Q9H792 1746 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms