RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 TERF2IPQ9NYB0 399 aa21.11■□□□□ 0.97
CALD1-215ENST00000472096 LTN1O94822 1766 aa21.1■□□□□ 0.97
CALD1-215ENST00000472096 CCDC9Q9Y3X0 531 aaKnown RBP21.09■□□□□ 0.97
CALD1-215ENST00000472096 USP31Q70CQ4 1352 aa21.09■□□□□ 0.97
CALD1-215ENST00000472096 THSD7AQ9UPZ6 1657 aa21.09■□□□□ 0.97
CALD1-215ENST00000472096 KIF20BQ96Q89 1820 aa21.08■□□□□ 0.97
CALD1-215ENST00000472096 DSG3P32926 999 aa21.08■□□□□ 0.97
CALD1-215ENST00000472096 ANKRD36BQ8N2N9 1353 aa21.08■□□□□ 0.96
CALD1-215ENST00000472096 MKRN4PQ13434 485 aaPredicted RBP21.07■□□□□ 0.96
CALD1-215ENST00000472096 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.07■□□□□ 0.96
CALD1-215ENST00000472096 COL5A2P05997 1499 aaPredicted RBP21.07■□□□□ 0.96
CALD1-215ENST00000472096 ABCC6O95255 1503 aa21.06■□□□□ 0.96
CALD1-215ENST00000472096 CDCA8Q53HL2 280 aa21.06■□□□□ 0.96
CALD1-215ENST00000472096 NME9Q86XW9 330 aa21.06■□□□□ 0.96
CALD1-215ENST00000472096 SPATA31A5Q5VU36 1347 aa21.05■□□□□ 0.96
CALD1-215ENST00000472096 SPATA31A7Q8IWB4 1347 aa21.05■□□□□ 0.96
CALD1-215ENST00000472096 OVOS2A0A0J9YW53 1432 aa21.05■□□□□ 0.96
CALD1-215ENST00000472096 OVOS2Q6IE36 1432 aa21.05■□□□□ 0.96
CALD1-215ENST00000472096 WNK3Q9BYP7 1800 aa21.05■□□□□ 0.96
CALD1-215ENST00000472096 EIF4G2P78344 907 aaKnown RBP eCLIP21.04■□□□□ 0.96
CALD1-215ENST00000472096 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
CALD1-215ENST00000472096 AATKQ6ZMQ8 1374 aa21.04■□□□□ 0.96
CALD1-215ENST00000472096 KCNH5Q8NCM2 988 aa21.03■□□□□ 0.96
CALD1-215ENST00000472096 UPF1Q92900 1129 aaKnown RBP eCLIP21.03■□□□□ 0.96
CALD1-215ENST00000472096 STRN4Q9NRL3 753 aa21.03■□□□□ 0.96
CALD1-215ENST00000472096 HSPA5P11021 654 aaKnown RBP21.02■□□□□ 0.96
CALD1-215ENST00000472096 EP400Q96L91 3159 aa21.02■□□□□ 0.96
CALD1-215ENST00000472096 ZBTB7CA1YPR0 619 aa21.01■□□□□ 0.95
CALD1-215ENST00000472096 SOX12O15370 315 aa21.01■□□□□ 0.95
CALD1-215ENST00000472096 ONECUT3O60422 494 aaPredicted RBP21.01■□□□□ 0.95
CALD1-215ENST00000472096 SPATA31A1Q5TZJ5 1347 aa21.01■□□□□ 0.95
CALD1-215ENST00000472096 SEPT12Q8IYM1 358 aa21■□□□□ 0.95
CALD1-215ENST00000472096 FAM98CQ17RN3 349 aaKnown RBP20.99■□□□□ 0.95
CALD1-215ENST00000472096 ARHGEF25Q86VW2 580 aa20.99■□□□□ 0.95
CALD1-215ENST00000472096 EVA1CP58658 441 aa20.98■□□□□ 0.95
CALD1-215ENST00000472096 PARP4Q9UKK3 1724 aaKnown RBP20.98■□□□□ 0.95
CALD1-215ENST00000472096 LARP1Q6PKG0 1096 aaKnown RBP20.97■□□□□ 0.95
CALD1-215ENST00000472096 CRB1P82279 1406 aa20.96■□□□□ 0.95
CALD1-215ENST00000472096 A0A0G2JS52 829 aa20.96■□□□□ 0.95
CALD1-215ENST00000472096 MYT1Q01538 1121 aa20.96■□□□□ 0.95
CALD1-215ENST00000472096 ANKRD26Q9UPS8 1709 aa20.95■□□□□ 0.94
CALD1-215ENST00000472096 AXIN2Q9Y2T1 843 aa20.94■□□□□ 0.94
CALD1-215ENST00000472096 NSD3Q9BZ95 1437 aa20.94■□□□□ 0.94
CALD1-215ENST00000472096 LRRC37A3O60309 1634 aa20.93■□□□□ 0.94
CALD1-215ENST00000472096 FAM208AQ9UK61 1670 aaKnown RBP20.93■□□□□ 0.94
CALD1-215ENST00000472096 KRT27Q7Z3Y8 459 aa20.93■□□□□ 0.94
CALD1-215ENST00000472096 USP35Q9P2H5 1018 aa20.93■□□□□ 0.94
CALD1-215ENST00000472096 BARGINQ6ZT62 677 aa20.92■□□□□ 0.94
CALD1-215ENST00000472096 WDR17Q8IZU2 1322 aa20.92■□□□□ 0.94
CALD1-215ENST00000472096 TCP11L2Q8N4U5 519 aa20.91■□□□□ 0.94
CALD1-215ENST00000472096 COG3Q96JB2 828 aa20.91■□□□□ 0.94
CALD1-215ENST00000472096 RGPD1P0DJD0 1748 aa20.9■□□□□ 0.94
CALD1-215ENST00000472096 POLR3GLQ9BT43 218 aa20.9■□□□□ 0.94
CALD1-215ENST00000472096 FYB1O15117 783 aa20.89■□□□□ 0.93
CALD1-215ENST00000472096 CARD14Q9BXL6 1004 aa20.89■□□□□ 0.93
CALD1-215ENST00000472096 THRAP3Q9Y2W1 955 aaKnown RBP20.89■□□□□ 0.93
CALD1-215ENST00000472096 TNS1Q9HBL0 1735 aaKnown RBP20.88■□□□□ 0.93
CALD1-215ENST00000472096 GGNBP2Q9H3C7 697 aa20.88■□□□□ 0.93
CALD1-215ENST00000472096 BLMP54132 1417 aaPredicted RBP20.87■□□□□ 0.93
CALD1-215ENST00000472096 TOM1L2Q6ZVM7 507 aa20.87■□□□□ 0.93
CALD1-215ENST00000472096 RGPD2P0DJD1 1756 aa20.87■□□□□ 0.93
CALD1-215ENST00000472096 ERBB3P21860 1342 aa20.86■□□□□ 0.93
CALD1-215ENST00000472096 ZBTB12Q9Y330 459 aaPredicted RBP20.86■□□□□ 0.93
CALD1-215ENST00000472096 PEAK1Q9H792 1746 aa20.86■□□□□ 0.93
CALD1-215ENST00000472096 MAP3K19Q56UN5 1328 aa20.84■□□□□ 0.93
CALD1-215ENST00000472096 C11orf95C9JLR9 678 aaPredicted RBP20.84■□□□□ 0.93
CALD1-215ENST00000472096 CSB-PGBD3P0DP91 1061 aa20.84■□□□□ 0.93
CALD1-215ENST00000472096 RTL1A6NKG5 1358 aa20.84■□□□□ 0.93
CALD1-215ENST00000472096 MAP2P11137 1827 aaKnown RBP20.83■□□□□ 0.93
CALD1-215ENST00000472096 CCDC125Q86Z20 511 aa20.83■□□□□ 0.93
CALD1-215ENST00000472096 DISP2A7MBM2 1401 aa20.83■□□□□ 0.93
CALD1-215ENST00000472096 CCDC7Q96M83 1385 aa20.83■□□□□ 0.92
CALD1-215ENST00000472096 CARD10Q9BWT7 1032 aa20.82■□□□□ 0.92
CALD1-215ENST00000472096 SBF2Q86WG5 1849 aa20.82■□□□□ 0.92
CALD1-215ENST00000472096 CGNL1Q0VF96 1302 aa20.81■□□□□ 0.92
CALD1-215ENST00000472096 FBLN1P23142 703 aa20.81■□□□□ 0.92
CALD1-215ENST00000472096 FAM182BQ5T319 152 aa20.81■□□□□ 0.92
CALD1-215ENST00000472096 IP6K1Q92551 441 aa20.81■□□□□ 0.92
CALD1-215ENST00000472096 KIF7Q2M1P5 1343 aa20.8■□□□□ 0.92
CALD1-215ENST00000472096 ANKRD24Q8TF21 1146 aa20.8■□□□□ 0.92
CALD1-215ENST00000472096 HOXC9P31274 260 aa20.79■□□□□ 0.92
CALD1-215ENST00000472096 RRS1Q15050 365 aaKnown RBP20.78■□□□□ 0.92
CALD1-215ENST00000472096 PANK3Q9H999 370 aa20.78■□□□□ 0.92
CALD1-215ENST00000472096 AMPHP49418 695 aa20.77■□□□□ 0.92
CALD1-215ENST00000472096 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
CALD1-215ENST00000472096 CDCA7Q9BWT1 371 aaPredicted RBP20.77■□□□□ 0.92
CALD1-215ENST00000472096 TNS2Q63HR2 1409 aa20.77■□□□□ 0.91
CALD1-215ENST00000472096 NLRP2Q9NX02 1062 aa20.76■□□□□ 0.91
CALD1-215ENST00000472096 OVOS2A0A0G2JMS6 1433 aa20.76■□□□□ 0.91
CALD1-215ENST00000472096 FLT4P35916 1363 aa20.75■□□□□ 0.91
CALD1-215ENST00000472096 KIF24Q5T7B8 1368 aa20.75■□□□□ 0.91
CALD1-215ENST00000472096 SPDYE4A6NLX3 237 aa20.75■□□□□ 0.91
CALD1-215ENST00000472096 DDB1Q16531 1140 aa20.75■□□□□ 0.91
CALD1-215ENST00000472096 FAM196AQ6ZSG2 479 aa20.75■□□□□ 0.91
CALD1-215ENST00000472096 NSD2O96028 1365 aa20.74■□□□□ 0.91
CALD1-215ENST00000472096 SF3B2Q13435 895 aaKnown RBP20.74■□□□□ 0.91
CALD1-215ENST00000472096 LTV1Q96GA3 475 aaPredicted RBP20.74■□□□□ 0.91
CALD1-215ENST00000472096 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
CALD1-215ENST00000472096 SMG6Q86US8 1419 aaKnown RBP20.73■□□□□ 0.91
CALD1-215ENST00000472096 DEFB132Q7Z7B7 95 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms