RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SYT17Q9BSW7 474 aa27.78■■■□□ 2.04
SORT1-203ENST00000471996 SBF2Q86WG5 1849 aa27.78■■■□□ 2.04
SORT1-203ENST00000471996 NLRP6P59044 892 aa27.77■■■□□ 2.04
SORT1-203ENST00000471996 SRPK2P78362 688 aaKnown RBP27.77■■■□□ 2.04
SORT1-203ENST00000471996 STK32BQ9NY57 414 aa27.77■■■□□ 2.04
SORT1-203ENST00000471996 MYOM1P52179 1685 aa27.77■■■□□ 2.04
SORT1-203ENST00000471996 CDCA7Q9BWT1 371 aaPredicted RBP27.76■■■□□ 2.03
SORT1-203ENST00000471996 FHDC1Q9C0D6 1143 aaPredicted RBP27.76■■■□□ 2.03
SORT1-203ENST00000471996 SLC15A2Q16348 729 aa27.75■■■□□ 2.03
SORT1-203ENST00000471996 TXNRD1Q16881 649 aa27.75■■■□□ 2.03
SORT1-203ENST00000471996 WDR17Q8IZU2 1322 aa27.74■■■□□ 2.03
SORT1-203ENST00000471996 AXIN2Q9Y2T1 843 aa27.73■■■□□ 2.03
SORT1-203ENST00000471996 SLIT3O75094 1523 aa27.72■■■□□ 2.03
SORT1-203ENST00000471996 SENP3-EIF4A1A0A087X0R7 540 aa27.72■■■□□ 2.03
SORT1-203ENST00000471996 MTFR1LQ9H019 292 aa27.72■■■□□ 2.03
SORT1-203ENST00000471996 CABP2Q9NPB3 220 aa27.72■■■□□ 2.03
SORT1-203ENST00000471996 USP6P35125 1406 aa27.7■■■□□ 2.03
SORT1-203ENST00000471996 C1QTNF8P60827 252 aa27.7■■■□□ 2.02
SORT1-203ENST00000471996 SGIP1Q9BQI5 828 aa27.7■■■□□ 2.02
SORT1-203ENST00000471996 CABP1Q9NZU7 370 aa27.69■■■□□ 2.02
SORT1-203ENST00000471996 NBPF1Q3BBV0 1214 aa27.68■■■□□ 2.02
SORT1-203ENST00000471996 CARD10Q9BWT7 1032 aa27.67■■■□□ 2.02
SORT1-203ENST00000471996 COL18A1P39060 1754 aa27.66■■■□□ 2.02
SORT1-203ENST00000471996 CENPJQ9HC77 1338 aaPredicted RBP27.66■■■□□ 2.02
SORT1-203ENST00000471996 EXOC5O00471 708 aa27.65■■■□□ 2.02
SORT1-203ENST00000471996 ARHGEF25Q86VW2 580 aa27.65■■■□□ 2.02
SORT1-203ENST00000471996 CPSF1Q10570 1443 aaKnown RBP27.64■■■□□ 2.02
SORT1-203ENST00000471996 ARXQ96QS3 562 aa27.63■■■□□ 2.01
SORT1-203ENST00000471996 KIAA1210Q9ULL0 1709 aa27.63■■■□□ 2.01
SORT1-203ENST00000471996 WNK3Q9BYP7 1800 aa27.62■■■□□ 2.01
SORT1-203ENST00000471996 CSB-PGBD3P0DP91 1061 aa27.62■■■□□ 2.01
SORT1-203ENST00000471996 MAP3K5Q99683 1374 aa27.6■■■□□ 2.01
SORT1-203ENST00000471996 AKAP12Q02952 1782 aa27.6■■■□□ 2.01
SORT1-203ENST00000471996 KCNH5Q8NCM2 988 aa27.6■■■□□ 2.01
SORT1-203ENST00000471996 PIK3C2AO00443 1686 aa27.59■■■□□ 2.01
SORT1-203ENST00000471996 CCDC7Q96M83 1385 aa27.57■■■□□ 2
SORT1-203ENST00000471996 CHD4Q14839 1912 aa27.56■■■□□ 2
SORT1-203ENST00000471996 TTC21BQ7Z4L5 1316 aa27.55■■■□□ 2
SORT1-203ENST00000471996 TNS2Q63HR2 1409 aa27.55■■■□□ 2
SORT1-203ENST00000471996 SOX12O15370 315 aa27.54■■■□□ 2
SORT1-203ENST00000471996 GPR162Q16538 588 aa27.53■■■□□ 2
SORT1-203ENST00000471996 ACSBG1Q96GR2 724 aa27.53■■■□□ 2
SORT1-203ENST00000471996 ZNF692Q9BU19 519 aaPredicted RBP27.53■■■□□ 2
SORT1-203ENST00000471996 IFFO2Q5TF58 517 aa27.51■■□□□ 1.99
SORT1-203ENST00000471996 TRPM1Q7Z4N2 1603 aa27.5■■□□□ 1.99
SORT1-203ENST00000471996 NHSQ6T4R5 1651 aa27.49■■□□□ 1.99
SORT1-203ENST00000471996 QRICH2Q9H0J4 1663 aa27.49■■□□□ 1.99
SORT1-203ENST00000471996 PAPPAQ13219 1627 aa27.49■■□□□ 1.99
SORT1-203ENST00000471996 EVC2Q86UK5 1308 aa27.49■■□□□ 1.99
SORT1-203ENST00000471996 TTC21AQ8NDW8 1320 aa27.49■■□□□ 1.99
SORT1-203ENST00000471996 GIGYF1O75420 1035 aaPredicted RBP27.49■■□□□ 1.99
SORT1-203ENST00000471996 ZNF827Q17R98 1081 aa27.49■■□□□ 1.99
SORT1-203ENST00000471996 RGPD5Q99666 1765 aa27.48■■□□□ 1.99
SORT1-203ENST00000471996 NFAT5O94916 1531 aa27.46■■□□□ 1.99
SORT1-203ENST00000471996 LRRC4BQ9NT99 713 aa27.46■■□□□ 1.99
SORT1-203ENST00000471996 ABCC6O95255 1503 aa27.46■■□□□ 1.99
SORT1-203ENST00000471996 SLC16A10Q8TF71 515 aa27.44■■□□□ 1.98
SORT1-203ENST00000471996 IL2RBP14784 551 aa27.42■■□□□ 1.98
SORT1-203ENST00000471996 AKT1S1Q96B36 256 aa27.42■■□□□ 1.98
SORT1-203ENST00000471996 ERBB3P21860 1342 aa27.41■■□□□ 1.98
SORT1-203ENST00000471996 POLD1P28340 1107 aa27.41■■□□□ 1.98
SORT1-203ENST00000471996 KLHL34Q8N239 644 aa27.41■■□□□ 1.98
SORT1-203ENST00000471996 NLRP2Q9NX02 1062 aa27.41■■□□□ 1.98
SORT1-203ENST00000471996 PELP1Q8IZL8 1130 aaKnown RBP27.39■■□□□ 1.98
SORT1-203ENST00000471996 SLC27A3Q5K4L6 730 aa27.38■■□□□ 1.97
SORT1-203ENST00000471996 GOLGB1Q14789 3259 aaKnown RBP27.38■■□□□ 1.97
SORT1-203ENST00000471996 KTN1Q86UP2 1357 aaKnown RBP27.37■■□□□ 1.97
SORT1-203ENST00000471996 BTAF1O14981 1849 aa27.37■■□□□ 1.97
SORT1-203ENST00000471996 PNPLA7Q6ZV29 1317 aa27.36■■□□□ 1.97
SORT1-203ENST00000471996 NLGN2Q8NFZ4 835 aa27.34■■□□□ 1.97
SORT1-203ENST00000471996 USP31Q70CQ4 1352 aa27.34■■□□□ 1.97
SORT1-203ENST00000471996 ANKRD24Q8TF21 1146 aa27.32■■□□□ 1.96
SORT1-203ENST00000471996 SHANK3Q9BYB0 1731 aa27.31■■□□□ 1.96
SORT1-203ENST00000471996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.31■■□□□ 1.967e-7■□□□□ 9.5
SORT1-203ENST00000471996 TFCP2L1Q9NZI6 479 aa27.31■■□□□ 1.96
SORT1-203ENST00000471996 CEP350Q5VT06 3117 aa27.31■■□□□ 1.96
SORT1-203ENST00000471996 GRIN3BO60391 1043 aa27.29■■□□□ 1.96
SORT1-203ENST00000471996 COL24A1Q17RW2 1714 aa27.29■■□□□ 1.96
SORT1-203ENST00000471996 QSER1Q2KHR3 1735 aa27.28■■□□□ 1.96
SORT1-203ENST00000471996 YBX3P16989 372 aaKnown RBP eCLIP27.27■■□□□ 1.96
SORT1-203ENST00000471996 NME9Q86XW9 330 aa27.27■■□□□ 1.96
SORT1-203ENST00000471996 DDX54Q8TDD1 881 aaKnown RBP27.27■■□□□ 1.96
SORT1-203ENST00000471996 L3MBTL2Q969R5 705 aa27.27■■□□□ 1.96
SORT1-203ENST00000471996 KCNQ4P56696 695 aa27.26■■□□□ 1.95
SORT1-203ENST00000471996 SBNO2Q9Y2G9 1366 aa27.22■■□□□ 1.95
SORT1-203ENST00000471996 MON2Q7Z3U7 1717 aa27.22■■□□□ 1.95
SORT1-203ENST00000471996 USP54Q70EL1 1684 aa27.22■■□□□ 1.95
SORT1-203ENST00000471996 SYTL4Q96C24 671 aaPredicted RBP27.22■■□□□ 1.95
SORT1-203ENST00000471996 ROCK2O75116 1388 aaKnown RBP27.22■■□□□ 1.95
SORT1-203ENST00000471996 PRIM1P49642 420 aaKnown RBP27.21■■□□□ 1.95
SORT1-203ENST00000471996 ANKRD36BQ8N2N9 1353 aa27.21■■□□□ 1.95
SORT1-203ENST00000471996 KAT6BQ8WYB5 2073 aa27.2■■□□□ 1.94
SORT1-203ENST00000471996 ATP10DQ9P241 1426 aa27.19■■□□□ 1.94
SORT1-203ENST00000471996 LTN1O94822 1766 aa27.18■■□□□ 1.94
SORT1-203ENST00000471996 IP6K1Q92551 441 aa27.18■■□□□ 1.94
SORT1-203ENST00000471996 CD163L1Q9NR16 1453 aa27.18■■□□□ 1.94
SORT1-203ENST00000471996 COL23A1Q86Y22 540 aaPredicted RBP27.17■■□□□ 1.94
SORT1-203ENST00000471996 NSD2O96028 1365 aa27.17■■□□□ 1.94
SORT1-203ENST00000471996 TUBGCP6Q96RT7 1819 aa27.16■■□□□ 1.94
SORT1-203ENST00000471996 CCNL1Q9UK58 526 aaPredicted RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms