RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 PEAK1Q9H792 1746 aa19.11■□□□□ 0.65
SSR4-207ENST00000471724 SLIT2O94813 1529 aa19.1■□□□□ 0.65
SSR4-207ENST00000471724 SMG6Q86US8 1419 aaKnown RBP19.1■□□□□ 0.65
SSR4-207ENST00000471724 ZC3H6P61129 1189 aaKnown RBP19.1■□□□□ 0.65
SSR4-207ENST00000471724 BLMP54132 1417 aaPredicted RBP19.09■□□□□ 0.65
SSR4-207ENST00000471724 ARHGEF25Q86VW2 580 aa19.09■□□□□ 0.65
SSR4-207ENST00000471724 BCL9LQ86UU0 1499 aa19.08■□□□□ 0.64
SSR4-207ENST00000471724 ATRNO75882 1429 aa19.08■□□□□ 0.64
SSR4-207ENST00000471724 PARD3Q8TEW0 1356 aa19.07■□□□□ 0.64
SSR4-207ENST00000471724 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
SSR4-207ENST00000471724 UNC5CLQ8IV45 518 aa19.07■□□□□ 0.64
SSR4-207ENST00000471724 FLT4P35916 1363 aa19.06■□□□□ 0.64
SSR4-207ENST00000471724 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
SSR4-207ENST00000471724 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
SSR4-207ENST00000471724 COL5A2P05997 1499 aaPredicted RBP19.05■□□□□ 0.64
SSR4-207ENST00000471724 FAM83GA6ND36 823 aa19.04■□□□□ 0.64
SSR4-207ENST00000471724 TNNT2P45379 298 aaPredicted RBP19.04■□□□□ 0.64
SSR4-207ENST00000471724 AMPHP49418 695 aa19.04■□□□□ 0.64
SSR4-207ENST00000471724 RRS1Q15050 365 aaKnown RBP19.04■□□□□ 0.64
SSR4-207ENST00000471724 CHRNA2Q15822 529 aa19.04■□□□□ 0.64
SSR4-207ENST00000471724 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
SSR4-207ENST00000471724 WNK3Q9BYP7 1800 aa19.02■□□□□ 0.64
SSR4-207ENST00000471724 RALBP1Q15311 655 aa19.02■□□□□ 0.64
SSR4-207ENST00000471724 BTG4Q9NY30 223 aa19.02■□□□□ 0.64
SSR4-207ENST00000471724 RGS12O14924 1447 aa19.01■□□□□ 0.63
SSR4-207ENST00000471724 IP6K1Q92551 441 aa19.01■□□□□ 0.63
SSR4-207ENST00000471724 GJD4Q96KN9 370 aaPredicted RBP19.01■□□□□ 0.63
SSR4-207ENST00000471724 POLKQ9UBT6 870 aa19.01■□□□□ 0.63
SSR4-207ENST00000471724 EMILIN1Q9Y6C2 1016 aa19.01■□□□□ 0.63
SSR4-207ENST00000471724 INSRP06213 1382 aa19.01■□□□□ 0.63
SSR4-207ENST00000471724 HOXC9P31274 260 aa19■□□□□ 0.63
SSR4-207ENST00000471724 RGPD2P0DJD1 1756 aa18.99■□□□□ 0.63
SSR4-207ENST00000471724 FBLN1P23142 703 aa18.99■□□□□ 0.63
SSR4-207ENST00000471724 VPS72Q15906 364 aa18.99■□□□□ 0.63
SSR4-207ENST00000471724 ERBB3P21860 1342 aa18.99■□□□□ 0.63
SSR4-207ENST00000471724 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
SSR4-207ENST00000471724 CRB1P82279 1406 aa18.97■□□□□ 0.63
SSR4-207ENST00000471724 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
SSR4-207ENST00000471724 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
SSR4-207ENST00000471724 PPP2R1AP30153 589 aa18.96■□□□□ 0.63
SSR4-207ENST00000471724 EVA1CP58658 441 aa18.96■□□□□ 0.63
SSR4-207ENST00000471724 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
SSR4-207ENST00000471724 CCDC9Q9Y3X0 531 aaKnown RBP18.96■□□□□ 0.63
SSR4-207ENST00000471724 RGPD1P0DJD0 1748 aa18.96■□□□□ 0.63
SSR4-207ENST00000471724 GLI3P10071 1580 aa18.95■□□□□ 0.62
SSR4-207ENST00000471724 ANP32CO43423 234 aa18.95■□□□□ 0.62
SSR4-207ENST00000471724 MTHFSP49914 203 aa18.95■□□□□ 0.62
SSR4-207ENST00000471724 STRN4Q9NRL3 753 aa18.95■□□□□ 0.62
SSR4-207ENST00000471724 AXIN2Q9Y2T1 843 aa18.95■□□□□ 0.62
SSR4-207ENST00000471724 COL3A1P02461 1466 aaPredicted RBP18.95■□□□□ 0.62
SSR4-207ENST00000471724 ANKRD24Q8TF21 1146 aa18.94■□□□□ 0.62
SSR4-207ENST00000471724 CFAP53Q96M91 514 aa18.94■□□□□ 0.62
SSR4-207ENST00000471724 PARP4Q9UKK3 1724 aaKnown RBP18.94■□□□□ 0.62
SSR4-207ENST00000471724 CSB-PGBD3P0DP91 1061 aa18.93■□□□□ 0.62
SSR4-207ENST00000471724 HSP90AB2PQ58FF8 381 aa18.92■□□□□ 0.62
SSR4-207ENST00000471724 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
SSR4-207ENST00000471724 SPATA31A5Q5VU36 1347 aa18.91■□□□□ 0.62
SSR4-207ENST00000471724 SPATA31A7Q8IWB4 1347 aa18.91■□□□□ 0.62
SSR4-207ENST00000471724 THSD7AQ9UPZ6 1657 aa18.9■□□□□ 0.62
SSR4-207ENST00000471724 LARP1Q6PKG0 1096 aaKnown RBP18.9■□□□□ 0.62
SSR4-207ENST00000471724 NCAPD2Q15021 1401 aa18.9■□□□□ 0.62
SSR4-207ENST00000471724 LTV1Q96GA3 475 aaPredicted RBP18.89■□□□□ 0.61
SSR4-207ENST00000471724 SPATA31A1Q5TZJ5 1347 aa18.89■□□□□ 0.61
SSR4-207ENST00000471724 ONECUT3O60422 494 aaPredicted RBP18.88■□□□□ 0.61
SSR4-207ENST00000471724 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
SSR4-207ENST00000471724 UPF1Q92900 1129 aaKnown RBP eCLIP18.88■□□□□ 0.61
SSR4-207ENST00000471724 CARD10Q9BWT7 1032 aa18.88■□□□□ 0.61
SSR4-207ENST00000471724 LRRC37A3O60309 1634 aa18.87■□□□□ 0.61
SSR4-207ENST00000471724 EIF4A2Q14240 407 aaKnown RBP18.87■□□□□ 0.61
SSR4-207ENST00000471724 NLRP2Q9NX02 1062 aa18.87■□□□□ 0.61
SSR4-207ENST00000471724 THRAP3Q9Y2W1 955 aaKnown RBP18.87■□□□□ 0.61
SSR4-207ENST00000471724 DIAPH1O60610 1272 aaKnown RBP18.86■□□□□ 0.61
SSR4-207ENST00000471724 SEPT12Q8IYM1 358 aa18.86■□□□□ 0.61
SSR4-207ENST00000471724 A0A0G2JS52 829 aa18.85■□□□□ 0.61
SSR4-207ENST00000471724 MYT1Q01538 1121 aa18.85■□□□□ 0.61
SSR4-207ENST00000471724 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
SSR4-207ENST00000471724 PKD1L3Q7Z443 1732 aa18.85■□□□□ 0.61
SSR4-207ENST00000471724 PLEKHG2Q9H7P9 1386 aa18.84■□□□□ 0.61
SSR4-207ENST00000471724 IGSF1Q8N6C5 1336 aa18.84■□□□□ 0.61
SSR4-207ENST00000471724 DISP2A7MBM2 1401 aa18.83■□□□□ 0.61
SSR4-207ENST00000471724 IL13P35225 146 aa18.83■□□□□ 0.6
SSR4-207ENST00000471724 FAM98CQ17RN3 349 aaKnown RBP18.83■□□□□ 0.6
SSR4-207ENST00000471724 BARGINQ6ZT62 677 aa18.83■□□□□ 0.6
SSR4-207ENST00000471724 USP35Q9P2H5 1018 aa18.83■□□□□ 0.6
SSR4-207ENST00000471724 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
SSR4-207ENST00000471724 BRWD3Q6RI45 1802 aa18.83■□□□□ 0.6
SSR4-207ENST00000471724 CDCA7Q9BWT1 371 aaPredicted RBP18.82■□□□□ 0.6
SSR4-207ENST00000471724 KDRP35968 1356 aa18.81■□□□□ 0.6
SSR4-207ENST00000471724 NBPF6Q5VWK0 638 aa18.81■□□□□ 0.6
SSR4-207ENST00000471724 CCDC125Q86Z20 511 aa18.81■□□□□ 0.6
SSR4-207ENST00000471724 NBPF4Q96M43 638 aa18.81■□□□□ 0.6
SSR4-207ENST00000471724 EYA1Q99502 592 aa18.81■□□□□ 0.6
SSR4-207ENST00000471724 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
SSR4-207ENST00000471724 KRT27Q7Z3Y8 459 aa18.8■□□□□ 0.6
SSR4-207ENST00000471724 TNS2Q63HR2 1409 aa18.8■□□□□ 0.6
SSR4-207ENST00000471724 MEGF6O75095 1541 aa18.79■□□□□ 0.6
SSR4-207ENST00000471724 OVOS2A0A0G2JMS6 1433 aa18.79■□□□□ 0.6
SSR4-207ENST00000471724 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
SSR4-207ENST00000471724 IL2RBP14784 551 aa18.78■□□□□ 0.6
SSR4-207ENST00000471724 USHBP1Q8N6Y0 703 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms