RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.4
PPP1R3F-204ENST00000471261 NFAT5O94916 1531 aa17.52■□□□□ 0.39
PPP1R3F-204ENST00000471261 OVOS2A0A0J9YW53 1432 aa17.5■□□□□ 0.39
PPP1R3F-204ENST00000471261 OVOS2Q6IE36 1432 aa17.5■□□□□ 0.39
PPP1R3F-204ENST00000471261 BRWD3Q6RI45 1802 aa17.49■□□□□ 0.39
PPP1R3F-204ENST00000471261 CRB1P82279 1406 aa17.49■□□□□ 0.39
PPP1R3F-204ENST00000471261 FAM182BQ5T319 152 aa17.49■□□□□ 0.39
PPP1R3F-204ENST00000471261 BARGINQ6ZT62 677 aa17.49■□□□□ 0.39
PPP1R3F-204ENST00000471261 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
PPP1R3F-204ENST00000471261 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
PPP1R3F-204ENST00000471261 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
PPP1R3F-204ENST00000471261 FYB1O15117 783 aa17.47■□□□□ 0.39
PPP1R3F-204ENST00000471261 CARD14Q9BXL6 1004 aa17.47■□□□□ 0.39
PPP1R3F-204ENST00000471261 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
PPP1R3F-204ENST00000471261 COL18A1P39060 1754 aa17.46■□□□□ 0.39
PPP1R3F-204ENST00000471261 USP54Q70EL1 1684 aa17.46■□□□□ 0.39
PPP1R3F-204ENST00000471261 PDE3BQ13370 1112 aa17.46■□□□□ 0.39
PPP1R3F-204ENST00000471261 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.39
PPP1R3F-204ENST00000471261 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
PPP1R3F-204ENST00000471261 THSD7AQ9UPZ6 1657 aa17.45■□□□□ 0.38
PPP1R3F-204ENST00000471261 FBLN1P23142 703 aa17.45■□□□□ 0.38
PPP1R3F-204ENST00000471261 MYOM1P52179 1685 aa17.45■□□□□ 0.38
PPP1R3F-204ENST00000471261 BLMP54132 1417 aaPredicted RBP17.44■□□□□ 0.38
PPP1R3F-204ENST00000471261 AMPHP49418 695 aa17.43■□□□□ 0.38
PPP1R3F-204ENST00000471261 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
PPP1R3F-204ENST00000471261 CARD10Q9BWT7 1032 aa17.43■□□□□ 0.38
PPP1R3F-204ENST00000471261 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
PPP1R3F-204ENST00000471261 ABCC6O95255 1503 aa17.42■□□□□ 0.38
PPP1R3F-204ENST00000471261 C11orf95C9JLR9 678 aaPredicted RBP17.42■□□□□ 0.38
PPP1R3F-204ENST00000471261 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
PPP1R3F-204ENST00000471261 IP6K1Q92551 441 aa17.42■□□□□ 0.38
PPP1R3F-204ENST00000471261 LTV1Q96GA3 475 aaPredicted RBP17.42■□□□□ 0.38
PPP1R3F-204ENST00000471261 ERBB3P21860 1342 aa17.42■□□□□ 0.38
PPP1R3F-204ENST00000471261 MAP3K19Q56UN5 1328 aa17.42■□□□□ 0.38
PPP1R3F-204ENST00000471261 LTN1O94822 1766 aa17.41■□□□□ 0.38
PPP1R3F-204ENST00000471261 CGNL1Q0VF96 1302 aa17.41■□□□□ 0.38
PPP1R3F-204ENST00000471261 RGPD5Q99666 1765 aa17.4■□□□□ 0.38
PPP1R3F-204ENST00000471261 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
PPP1R3F-204ENST00000471261 HOXC9P31274 260 aa17.39■□□□□ 0.37
PPP1R3F-204ENST00000471261 DDB1Q16531 1140 aa17.39■□□□□ 0.37
PPP1R3F-204ENST00000471261 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
PPP1R3F-204ENST00000471261 PANK3Q9H999 370 aa17.39■□□□□ 0.37
PPP1R3F-204ENST00000471261 CDCA7Q9BWT1 371 aaPredicted RBP17.38■□□□□ 0.37
PPP1R3F-204ENST00000471261 CCDC7Q96M83 1385 aa17.38■□□□□ 0.37
PPP1R3F-204ENST00000471261 TRIM37O94972 964 aa17.37■□□□□ 0.37
PPP1R3F-204ENST00000471261 KIF20BQ96Q89 1820 aa17.37■□□□□ 0.37
PPP1R3F-204ENST00000471261 KIF7Q2M1P5 1343 aa17.36■□□□□ 0.37
PPP1R3F-204ENST00000471261 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
PPP1R3F-204ENST00000471261 BAG6P46379 1132 aa17.35■□□□□ 0.37
PPP1R3F-204ENST00000471261 PARP4Q9UKK3 1724 aaKnown RBP17.35■□□□□ 0.37
PPP1R3F-204ENST00000471261 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
PPP1R3F-204ENST00000471261 EXOC5O00471 708 aa17.34■□□□□ 0.37
PPP1R3F-204ENST00000471261 TNNT2P45379 298 aaPredicted RBP17.34■□□□□ 0.37
PPP1R3F-204ENST00000471261 DISP2A7MBM2 1401 aa17.33■□□□□ 0.36
PPP1R3F-204ENST00000471261 IL2RBP14784 551 aa17.33■□□□□ 0.36
PPP1R3F-204ENST00000471261 LRRC37A3O60309 1634 aa17.32■□□□□ 0.36
PPP1R3F-204ENST00000471261 OVOS2A0A0G2JMS6 1433 aa17.32■□□□□ 0.36
PPP1R3F-204ENST00000471261 EN1Q05925 392 aaPredicted RBP17.32■□□□□ 0.36
PPP1R3F-204ENST00000471261 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
PPP1R3F-204ENST00000471261 KNSTRNQ9Y448 316 aa17.32■□□□□ 0.36
PPP1R3F-204ENST00000471261 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
PPP1R3F-204ENST00000471261 SMG6Q86US8 1419 aaKnown RBP17.31■□□□□ 0.36
PPP1R3F-204ENST00000471261 FLT4P35916 1363 aa17.31■□□□□ 0.36
PPP1R3F-204ENST00000471261 APBA3O96018 575 aa17.31■□□□□ 0.36
PPP1R3F-204ENST00000471261 MARCH10Q8NA82 808 aaPredicted RBP17.31■□□□□ 0.36
PPP1R3F-204ENST00000471261 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
PPP1R3F-204ENST00000471261 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
PPP1R3F-204ENST00000471261 RGPD1P0DJD0 1748 aa17.29■□□□□ 0.36
PPP1R3F-204ENST00000471261 TNS2Q63HR2 1409 aa17.29■□□□□ 0.36
PPP1R3F-204ENST00000471261 INSRP06213 1382 aa17.28■□□□□ 0.36
PPP1R3F-204ENST00000471261 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
PPP1R3F-204ENST00000471261 NBPF6Q5VWK0 638 aa17.27■□□□□ 0.36
PPP1R3F-204ENST00000471261 MORC1Q86VD1 984 aa17.27■□□□□ 0.36
PPP1R3F-204ENST00000471261 NBPF4Q96M43 638 aa17.27■□□□□ 0.36
PPP1R3F-204ENST00000471261 PEAK1Q9H792 1746 aa17.27■□□□□ 0.35
PPP1R3F-204ENST00000471261 NSD2O96028 1365 aa17.27■□□□□ 0.35
PPP1R3F-204ENST00000471261 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
PPP1R3F-204ENST00000471261 EZH2Q15910 746 aaKnown RBP17.26■□□□□ 0.35
PPP1R3F-204ENST00000471261 POLKQ9UBT6 870 aa17.26■□□□□ 0.35
PPP1R3F-204ENST00000471261 TNS1Q9HBL0 1735 aaKnown RBP17.25■□□□□ 0.35
PPP1R3F-204ENST00000471261 DDX54Q8TDD1 881 aaKnown RBP17.25■□□□□ 0.35
PPP1R3F-204ENST00000471261 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
PPP1R3F-204ENST00000471261 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
PPP1R3F-204ENST00000471261 SRCAPQ6ZRS2 3230 aa17.23■□□□□ 0.35
PPP1R3F-204ENST00000471261 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
PPP1R3F-204ENST00000471261 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
PPP1R3F-204ENST00000471261 ACSBG1Q96GR2 724 aa17.23■□□□□ 0.35
PPP1R3F-204ENST00000471261 CAMKK2Q96RR4 588 aa17.23■□□□□ 0.35
PPP1R3F-204ENST00000471261 BCL11BQ9C0K0 894 aaPredicted RBP17.23■□□□□ 0.35
PPP1R3F-204ENST00000471261 AMER1Q5JTC6 1135 aaPredicted RBP17.22■□□□□ 0.35
PPP1R3F-204ENST00000471261 BCL9O00512 1426 aa17.21■□□□□ 0.35
PPP1R3F-204ENST00000471261 MEGF6O75095 1541 aa17.21■□□□□ 0.35
PPP1R3F-204ENST00000471261 CC2D1BQ5T0F9 858 aaKnown RBP17.21■□□□□ 0.35
PPP1R3F-204ENST00000471261 ZCRB1Q8TBF4 217 aaKnown RBP17.21■□□□□ 0.35
PPP1R3F-204ENST00000471261 ANKRD26Q9UPS8 1709 aa17.21■□□□□ 0.35
PPP1R3F-204ENST00000471261 RGPD2P0DJD1 1756 aa17.2■□□□□ 0.34
PPP1R3F-204ENST00000471261 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
PPP1R3F-204ENST00000471261 PARD3Q8TEW0 1356 aa17.19■□□□□ 0.34
PPP1R3F-204ENST00000471261 KCNQ2O43526 872 aa17.19■□□□□ 0.34
PPP1R3F-204ENST00000471261 PSDA5PKW4 1024 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms