RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 POTEBQ6S5H4 581 aa7.88□□□□□ -1.15
HDAC8-216ENST00000470998 PCDHGA10Q9Y5H3 936 aa7.88□□□□□ -1.15
HDAC8-216ENST00000470998 TULP1O00294 542 aaPredicted RBP7.87□□□□□ -1.15
HDAC8-216ENST00000470998 MAP3K7O43318 606 aa7.87□□□□□ -1.15
HDAC8-216ENST00000470998 RBM33Q96EV2 1170 aaKnown RBP7.87□□□□□ -1.15
HDAC8-216ENST00000470998 KCNK17Q96T54 332 aa7.87□□□□□ -1.15
HDAC8-216ENST00000470998 C19orf44Q9H6X5 657 aa7.87□□□□□ -1.15
HDAC8-216ENST00000470998 SLAIN2Q9P270 581 aa7.87□□□□□ -1.15
HDAC8-216ENST00000470998 RPGRIP1LQ68CZ1 1315 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 ARHGAP33O14559 1287 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 ANP32CO43423 234 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 ZNF326Q5BKZ1 582 aaKnown RBP7.86□□□□□ -1.15
HDAC8-216ENST00000470998 SMYD5Q6GMV2 418 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 L3MBTL2Q969R5 705 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 STAC3Q96MF2 364 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 BCL2L12Q9HB09 334 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 AMOTL2Q9Y2J4 779 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 TRPM2O94759 1503 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 RALGAPBQ86X10 1494 aa7.86□□□□□ -1.15
HDAC8-216ENST00000470998 ATF3P18847 181 aa7.85□□□□□ -1.15
HDAC8-216ENST00000470998 NUTM2DQ5VT03 806 aaPredicted RBP7.85□□□□□ -1.15
HDAC8-216ENST00000470998 C14orf37Q86TY3 774 aa7.85□□□□□ -1.15
HDAC8-216ENST00000470998 AXIN2Q9Y2T1 843 aa7.85□□□□□ -1.15
HDAC8-216ENST00000470998 DCCP43146 1447 aa7.85□□□□□ -1.15
HDAC8-216ENST00000470998 SPATA31E1Q6ZUB1 1445 aa7.85□□□□□ -1.15
HDAC8-216ENST00000470998 XIRP1Q702N8 1843 aaKnown RBP7.85□□□□□ -1.15
HDAC8-216ENST00000470998 ROCK2O75116 1388 aaKnown RBP7.84□□□□□ -1.15
HDAC8-216ENST00000470998 SEMA3EO15041 775 aa7.84□□□□□ -1.15
HDAC8-216ENST00000470998 ADAM33Q9BZ11 813 aa7.84□□□□□ -1.15
HDAC8-216ENST00000470998 CHD2O14647 1828 aaKnown RBP7.84□□□□□ -1.15
HDAC8-216ENST00000470998 CCDC144AA2RUR9 1427 aa7.84□□□□□ -1.15
HDAC8-216ENST00000470998 SETBP1Q9Y6X0 1596 aa7.84□□□□□ -1.15
HDAC8-216ENST00000470998 JCADQ9P266 1359 aa7.84□□□□□ -1.16
HDAC8-216ENST00000470998 EN1Q05925 392 aaPredicted RBP7.83□□□□□ -1.16
HDAC8-216ENST00000470998 ANKRD13DQ6ZTN6 518 aa7.83□□□□□ -1.16
HDAC8-216ENST00000470998 PTPRUQ92729 1446 aa7.83□□□□□ -1.16
HDAC8-216ENST00000470998 SPHKAPQ2M3C7 1700 aa7.83□□□□□ -1.16
HDAC8-216ENST00000470998 SPATA31A6Q5VVP1 1343 aa7.82□□□□□ -1.16
HDAC8-216ENST00000470998 HSPA5P11021 654 aaKnown RBP7.82□□□□□ -1.16
HDAC8-216ENST00000470998 PSEN2P49810 448 aa7.82□□□□□ -1.16
HDAC8-216ENST00000470998 LSM11P83369 360 aaKnown RBP eCLIP7.82□□□□□ -1.16
HDAC8-216ENST00000470998 PRAG1Q86YV5 1406 aa7.81□□□□□ -1.16
HDAC8-216ENST00000470998 MYO5BQ9ULV0 1848 aa7.81□□□□□ -1.16
HDAC8-216ENST00000470998 MLLT3P42568 568 aaPredicted RBP7.81□□□□□ -1.16
HDAC8-216ENST00000470998 DDX10Q13206 875 aaKnown RBP7.81□□□□□ -1.16
HDAC8-216ENST00000470998 ROBO1Q9Y6N7 1651 aa7.81□□□□□ -1.16
HDAC8-216ENST00000470998 NEXMIFQ5QGS0 1516 aa7.81□□□□□ -1.16
HDAC8-216ENST00000470998 METP08581 1390 aa7.81□□□□□ -1.16
HDAC8-216ENST00000470998 CCDC7Q96M83 1385 aa7.81□□□□□ -1.16
HDAC8-216ENST00000470998 PPP1R3GB7ZBB8 358 aa7.8□□□□□ -1.16
HDAC8-216ENST00000470998 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
HDAC8-216ENST00000470998 KRTAP3-2Q9BYR7 98 aa7.8□□□□□ -1.16
HDAC8-216ENST00000470998 RGS17Q9UGC6 210 aaPredicted RBP7.8□□□□□ -1.16
HDAC8-216ENST00000470998 GPRASP1Q5JY77 1395 aa7.8□□□□□ -1.16
HDAC8-216ENST00000470998 KTN1Q86UP2 1357 aaKnown RBP7.8□□□□□ -1.16
HDAC8-216ENST00000470998 PTCH1Q13635 1447 aa7.79□□□□□ -1.16
HDAC8-216ENST00000470998 LAMC1P11047 1609 aa7.79□□□□□ -1.16
HDAC8-216ENST00000470998 CLTCL1P53675 1640 aa7.79□□□□□ -1.16
HDAC8-216ENST00000470998 NRXN3Q9Y4C0 1643 aa7.79□□□□□ -1.16
HDAC8-216ENST00000470998 C6orf132Q5T0Z8 1188 aa7.79□□□□□ -1.16
HDAC8-216ENST00000470998 BRINP3Q76B58 766 aa7.79□□□□□ -1.16
HDAC8-216ENST00000470998 USP47Q96K76 1375 aa7.79□□□□□ -1.16
HDAC8-216ENST00000470998 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
HDAC8-216ENST00000470998 ADGRL3Q9HAR2 1447 aa7.78□□□□□ -1.16
HDAC8-216ENST00000470998 AHDC1Q5TGY3 1603 aaPredicted RBP7.78□□□□□ -1.16
HDAC8-216ENST00000470998 XRN1Q8IZH2 1706 aaKnown RBP7.78□□□□□ -1.16
HDAC8-216ENST00000470998 TESPA1A2RU30 521 aaPredicted RBP7.78□□□□□ -1.16
HDAC8-216ENST00000470998 OSBPP22059 807 aa7.78□□□□□ -1.16
HDAC8-216ENST00000470998 LRRC59Q96AG4 307 aaKnown RBP7.78□□□□□ -1.16
HDAC8-216ENST00000470998 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.78□□□□□ -1.16
HDAC8-216ENST00000470998 MST1RQ04912 1400 aa7.78□□□□□ -1.16
HDAC8-216ENST00000470998 NUTM2FA1L443 756 aa7.77□□□□□ -1.17
HDAC8-216ENST00000470998 NBPF8Q3BBV2 869 aa7.77□□□□□ -1.17
HDAC8-216ENST00000470998 DMRTA1Q5VZB9 504 aa7.77□□□□□ -1.17
HDAC8-216ENST00000470998 ZNF772Q68DY9 489 aaPredicted RBP7.77□□□□□ -1.17
HDAC8-216ENST00000470998 POTEEQ6S8J3 1075 aa7.77□□□□□ -1.17
HDAC8-216ENST00000470998 YTHDC1Q96MU7 727 aaKnown RBP7.77□□□□□ -1.17
HDAC8-216ENST00000470998 KIF1BO60333 1816 aa7.76□□□□□ -1.17
HDAC8-216ENST00000470998 PHLPP1O60346 1717 aa7.76□□□□□ -1.17
HDAC8-216ENST00000470998 TK2O00142 265 aa7.76□□□□□ -1.17
HDAC8-216ENST00000470998 TSR1Q2NL82 804 aaKnown RBP7.76□□□□□ -1.17
HDAC8-216ENST00000470998 ADGRD1Q6QNK2 874 aa7.76□□□□□ -1.17
HDAC8-216ENST00000470998 GTF3C3Q9Y5Q9 886 aa7.76□□□□□ -1.17
HDAC8-216ENST00000470998 COL16A1Q07092 1604 aaPredicted RBP7.76□□□□□ -1.17
HDAC8-216ENST00000470998 ASXL1Q8IXJ9 1541 aa7.75□□□□□ -1.17
HDAC8-216ENST00000470998 MEX3CQ5U5Q3 659 aaKnown RBP7.75□□□□□ -1.17
HDAC8-216ENST00000470998 POTEAQ6S8J7 498 aa7.75□□□□□ -1.17
HDAC8-216ENST00000470998 SIRT1Q96EB6 747 aa7.75□□□□□ -1.17
HDAC8-216ENST00000470998 KIF7Q2M1P5 1343 aa7.75□□□□□ -1.17
HDAC8-216ENST00000470998 C1orf167Q5SNV9 1468 aa7.75□□□□□ -1.17
HDAC8-216ENST00000470998 ROBO2Q9HCK4 1378 aa7.74□□□□□ -1.17
HDAC8-216ENST00000470998 CARD11Q9BXL7 1154 aa7.74□□□□□ -1.17
HDAC8-216ENST00000470998 NBPF3Q9H094 633 aa7.74□□□□□ -1.17
HDAC8-216ENST00000470998 ADGRF5Q8IZF2 1346 aa7.74□□□□□ -1.17
HDAC8-216ENST00000470998 LRPPRCP42704 1394 aaKnown RBP7.73□□□□□ -1.17
HDAC8-216ENST00000470998 ABCC11Q96J66 1382 aa7.73□□□□□ -1.17
HDAC8-216ENST00000470998 TECPR2O15040 1411 aa7.73□□□□□ -1.17
HDAC8-216ENST00000470998 COL9A1P20849 921 aa7.73□□□□□ -1.17
HDAC8-216ENST00000470998 ZBED2Q9BTP6 218 aa7.73□□□□□ -1.17
HDAC8-216ENST00000470998 CDHR5Q9HBB8 845 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms