RNA–Protein interactions for RNA: ENST00000470650.1

CCDC93-206, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-206ENST00000470650 ZNF787Q6DD87 383 aa10.66□□□□□ -0.7
CCDC93-206ENST00000470650 SH3BP5LQ7L8J4 393 aa10.66□□□□□ -0.7
CCDC93-206ENST00000470650 BPHLQ86WA6 291 aaPredicted RBP10.66□□□□□ -0.7
CCDC93-206ENST00000470650 AQRO60306 1485 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC93-206ENST00000470650 SH3RF1Q7Z6J0 888 aa10.65□□□□□ -0.7
CCDC93-206ENST00000470650 FAM174AQ8TBP5 190 aa10.65□□□□□ -0.7
CCDC93-206ENST00000470650 TMEM259Q4ZIN3 620 aa10.64□□□□□ -0.71
CCDC93-206ENST00000470650 NBPF14Q5TI25 921 aa10.64□□□□□ -0.71
CCDC93-206ENST00000470650 TRIM34Q9BYJ4 488 aa10.64□□□□□ -0.71
CCDC93-206ENST00000470650 CRIPAKQ8N1N5 446 aa10.62□□□□□ -0.71
CCDC93-206ENST00000470650 OCSTAMPQ9BR26 566 aa10.62□□□□□ -0.71
CCDC93-206ENST00000470650 SNRKQ9NRH2 765 aa10.62□□□□□ -0.71
CCDC93-206ENST00000470650 TOP2AP11388 1531 aaKnown RBP10.62□□□□□ -0.71
CCDC93-206ENST00000470650 NNTQ13423 1086 aa10.61□□□□□ -0.71
CCDC93-206ENST00000470650 ARHGAP9Q9BRR9 750 aa10.61□□□□□ -0.71
CCDC93-206ENST00000470650 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
CCDC93-206ENST00000470650 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
CCDC93-206ENST00000470650 SMCPP49901 116 aaPredicted RBP10.6□□□□□ -0.71
CCDC93-206ENST00000470650 CTC1Q2NKJ3 1217 aa10.6□□□□□ -0.71
CCDC93-206ENST00000470650 PDXDC2PQ6P474 469 aa10.6□□□□□ -0.71
CCDC93-206ENST00000470650 CDK15Q96Q40 435 aa10.6□□□□□ -0.71
CCDC93-206ENST00000470650 C1QTNF2Q9BXJ5 285 aa10.6□□□□□ -0.71
CCDC93-206ENST00000470650 GMPR2Q9P2T1 348 aaKnown RBP10.6□□□□□ -0.71
CCDC93-206ENST00000470650 NR3C2P08235 984 aa10.59□□□□□ -0.71
CCDC93-206ENST00000470650 GRM5P41594 1212 aa10.59□□□□□ -0.71
CCDC93-206ENST00000470650 ERFEQ4G0M1 354 aa10.59□□□□□ -0.71
CCDC93-206ENST00000470650 GJD4Q96KN9 370 aaPredicted RBP10.59□□□□□ -0.71
CCDC93-206ENST00000470650 SYNJ1O43426 1573 aa10.58□□□□□ -0.72
CCDC93-206ENST00000470650 ADH1CP00326 375 aa10.58□□□□□ -0.72
CCDC93-206ENST00000470650 MPNDQ8N594 471 aa10.58□□□□□ -0.72
CCDC93-206ENST00000470650 KIF13AQ9H1H9 1805 aa10.58□□□□□ -0.72
CCDC93-206ENST00000470650 CAPN5O15484 640 aaPredicted RBP10.57□□□□□ -0.72
CCDC93-206ENST00000470650 VASH1Q7L8A9 365 aaPredicted RBP10.57□□□□□ -0.72
CCDC93-206ENST00000470650 ZBTB33Q86T24 672 aa10.57□□□□□ -0.72
CCDC93-206ENST00000470650 GPKOWQ92917 476 aaPredicted RBP eCLIP10.57□□□□□ -0.72
CCDC93-206ENST00000470650 ATP13A2Q9NQ11 1180 aa10.57□□□□□ -0.72
CCDC93-206ENST00000470650 BMP1P13497 986 aa10.56□□□□□ -0.72
CCDC93-206ENST00000470650 MTMR14Q8NCE2 650 aa10.56□□□□□ -0.72
CCDC93-206ENST00000470650 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
CCDC93-206ENST00000470650 WDR4P57081 412 aaKnown RBP10.55□□□□□ -0.72
CCDC93-206ENST00000470650 ADAM32Q8TC27 787 aa10.55□□□□□ -0.72
CCDC93-206ENST00000470650 FSHRP23945 695 aa10.54□□□□□ -0.72
CCDC93-206ENST00000470650 PTK2Q05397 1052 aa10.54□□□□□ -0.72
CCDC93-206ENST00000470650 ZFAND3Q9H8U3 227 aa10.54□□□□□ -0.72
CCDC93-206ENST00000470650 POLA1P09884 1462 aaPredicted RBP10.54□□□□□ -0.72
CCDC93-206ENST00000470650 SNAPC4Q5SXM2 1469 aa10.54□□□□□ -0.72
CCDC93-206ENST00000470650 TIMP2P16035 220 aa10.53□□□□□ -0.72
CCDC93-206ENST00000470650 TRMT44Q8IYL2 757 aaKnown RBP10.53□□□□□ -0.72
CCDC93-206ENST00000470650 BANK1Q8NDB2 785 aa10.53□□□□□ -0.72
CCDC93-206ENST00000470650 KLF16Q9BXK1 252 aaPredicted RBP10.53□□□□□ -0.72
CCDC93-206ENST00000470650 ZC3H4Q9UPT8 1303 aaKnown RBP10.53□□□□□ -0.72
CCDC93-206ENST00000470650 TRIM46Q7Z4K8 759 aa10.52□□□□□ -0.73
CCDC93-206ENST00000470650 ITPKCQ96DU7 683 aa10.52□□□□□ -0.73
CCDC93-206ENST00000470650 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
CCDC93-206ENST00000470650 C11orf95C9JLR9 678 aaPredicted RBP10.51□□□□□ -0.73
CCDC93-206ENST00000470650 ZIC2O95409 532 aaPredicted RBP10.51□□□□□ -0.73
CCDC93-206ENST00000470650 NR5A1Q13285 461 aa10.51□□□□□ -0.73
CCDC93-206ENST00000470650 RAD54L2Q9Y4B4 1467 aa10.5□□□□□ -0.73
CCDC93-206ENST00000470650 SNRPBP14678 240 aaKnown RBP10.5□□□□□ -0.73
CCDC93-206ENST00000470650 SLC10A4Q96EP9 437 aa10.5□□□□□ -0.73
CCDC93-206ENST00000470650 KCTD15Q96SI1 283 aaPredicted RBP10.5□□□□□ -0.73
CCDC93-206ENST00000470650 TDRD9Q8NDG6 1382 aaKnown RBP10.5□□□□□ -0.73
CCDC93-206ENST00000470650 CCDC88BA6NC98 1476 aa10.49□□□□□ -0.73
CCDC93-206ENST00000470650 MAGI1Q96QZ7 1491 aaPredicted RBP10.49□□□□□ -0.73
CCDC93-206ENST00000470650 GPR37L1O60883 481 aa10.49□□□□□ -0.73
CCDC93-206ENST00000470650 RAB15P59190 212 aa10.49□□□□□ -0.73
CCDC93-206ENST00000470650 PNMA1Q8ND90 353 aa10.49□□□□□ -0.73
CCDC93-206ENST00000470650 MAP4K5Q9Y4K4 846 aa10.49□□□□□ -0.73
CCDC93-206ENST00000470650 CHMP7Q8WUX9 453 aaPredicted RBP10.48□□□□□ -0.73
CCDC93-206ENST00000470650 ZNF775Q96BV0 537 aaPredicted RBP10.48□□□□□ -0.73
CCDC93-206ENST00000470650 GPSM3Q9Y4H4 160 aa10.48□□□□□ -0.73
CCDC93-206ENST00000470650 ERCC6L2Q5T890 1561 aa10.48□□□□□ -0.73
CCDC93-206ENST00000470650 FBXO45P0C2W1 286 aa10.47□□□□□ -0.73
CCDC93-206ENST00000470650 DZIP3Q86Y13 1208 aaKnown RBP10.47□□□□□ -0.73
CCDC93-206ENST00000470650 SYNJ2O15056 1496 aa10.47□□□□□ -0.73
CCDC93-206ENST00000470650 ZBBXA8MT70 800 aa10.46□□□□□ -0.73
CCDC93-206ENST00000470650 CCDC116Q8IYX3 515 aa10.46□□□□□ -0.73
CCDC93-206ENST00000470650 TBC1D2BQ9UPU7 963 aa10.46□□□□□ -0.73
CCDC93-206ENST00000470650 SOGA1O94964 1423 aa10.45□□□□□ -0.74
CCDC93-206ENST00000470650 PPP1R26Q5T8A7 1209 aaPredicted RBP10.45□□□□□ -0.74
CCDC93-206ENST00000470650 ZFP42Q96MM3 310 aa10.45□□□□□ -0.74
CCDC93-206ENST00000470650 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
CCDC93-206ENST00000470650 NDUFB9Q9Y6M9 179 aa10.45□□□□□ -0.74
CCDC93-206ENST00000470650 INTS6LQ5JSJ4 861 aaKnown RBP10.44□□□□□ -0.74
CCDC93-206ENST00000470650 MRPL14Q6P1L8 145 aaKnown RBP10.44□□□□□ -0.74
CCDC93-206ENST00000470650 TMPRSS4Q9NRS4 437 aa10.44□□□□□ -0.74
CCDC93-206ENST00000470650 PCDHB9Q9Y5E1 797 aa10.44□□□□□ -0.74
CCDC93-206ENST00000470650 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
CCDC93-206ENST00000470650 CBLBQ13191 982 aa10.43□□□□□ -0.74
CCDC93-206ENST00000470650 C6orf118Q5T5N4 469 aa10.43□□□□□ -0.74
CCDC93-206ENST00000470650 TRIM47Q96LD4 638 aa10.43□□□□□ -0.74
CCDC93-206ENST00000470650 GRIN2BQ13224 1484 aa10.42□□□□□ -0.74
CCDC93-206ENST00000470650 SOBPA7XYQ1 873 aa10.41□□□□□ -0.74
CCDC93-206ENST00000470650 SENP2Q9HC62 589 aa10.41□□□□□ -0.74
CCDC93-206ENST00000470650 EMILIN1Q9Y6C2 1016 aa10.41□□□□□ -0.74
CCDC93-206ENST00000470650 GIGYF1O75420 1035 aaPredicted RBP10.4□□□□□ -0.74
CCDC93-206ENST00000470650 GDPD2Q9HCC8 539 aa10.4□□□□□ -0.74
CCDC93-206ENST00000470650 CDV3Q9UKY7 258 aaKnown RBP10.4□□□□□ -0.74
CCDC93-206ENST00000470650 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
CCDC93-206ENST00000470650 NR1H3Q13133 447 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms