RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.13
C1orf43-207ENST00000470180 NFE2L2Q16236 605 aa22.13■■□□□ 1.13
C1orf43-207ENST00000470180 FLT4P35916 1363 aa22.13■■□□□ 1.13
C1orf43-207ENST00000470180 NEFMP07197 916 aa22.12■■□□□ 1.13
C1orf43-207ENST00000470180 AEBP1Q8IUX7 1158 aa22.12■■□□□ 1.13
C1orf43-207ENST00000470180 MYH16Q9H6N6 1097 aa22.12■■□□□ 1.13
C1orf43-207ENST00000470180 AMPHP49418 695 aa22.11■■□□□ 1.13
C1orf43-207ENST00000470180 IL16Q14005 1332 aa22.11■■□□□ 1.13
C1orf43-207ENST00000470180 MST1RQ04912 1400 aa22.11■■□□□ 1.13
C1orf43-207ENST00000470180 BCAR3O75815 825 aa22.11■■□□□ 1.13
C1orf43-207ENST00000470180 ATF3P18847 181 aa22.11■■□□□ 1.13
C1orf43-207ENST00000470180 SULT6B1Q6IMI4 303 aa22.11■■□□□ 1.13
C1orf43-207ENST00000470180 DCCP43146 1447 aa22.1■■□□□ 1.13
C1orf43-207ENST00000470180 XPCQ01831 940 aaPredicted RBP22.1■■□□□ 1.13
C1orf43-207ENST00000470180 C20orf194Q5TEA3 1177 aa22.1■■□□□ 1.13
C1orf43-207ENST00000470180 PELP1Q8IZL8 1130 aaKnown RBP22.1■■□□□ 1.13
C1orf43-207ENST00000470180 XIRP1Q702N8 1843 aaKnown RBP22.1■■□□□ 1.13
C1orf43-207ENST00000470180 KIF1AQ12756 1690 aa22.09■■□□□ 1.13
C1orf43-207ENST00000470180 DLG5Q8TDM6 1919 aa22.09■■□□□ 1.13
C1orf43-207ENST00000470180 KIF24Q5T7B8 1368 aa22.09■■□□□ 1.13
C1orf43-207ENST00000470180 HOXC9P31274 260 aa22.09■■□□□ 1.13
C1orf43-207ENST00000470180 TRPM3Q9HCF6 1732 aaPredicted RBP22.08■■□□□ 1.13
C1orf43-207ENST00000470180 KRT28Q7Z3Y7 464 aa22.08■■□□□ 1.13
C1orf43-207ENST00000470180 TSR2Q969E8 191 aaKnown RBP22.07■■□□□ 1.12
C1orf43-207ENST00000470180 FANCIQ9NVI1 1328 aa22.07■■□□□ 1.12
C1orf43-207ENST00000470180 NFAT5O94916 1531 aa22.07■■□□□ 1.12
C1orf43-207ENST00000470180 CRBNQ96SW2 442 aa22.06■■□□□ 1.12
C1orf43-207ENST00000470180 ARHGEF10O15013 1369 aa22.06■■□□□ 1.12
C1orf43-207ENST00000470180 RARSP54136 660 aaKnown RBP22.05■■□□□ 1.12
C1orf43-207ENST00000470180 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.05■■□□□ 1.12
C1orf43-207ENST00000470180 EYA1Q99502 592 aa22.05■■□□□ 1.12
C1orf43-207ENST00000470180 LTN1O94822 1766 aa22.05■■□□□ 1.12
C1orf43-207ENST00000470180 CADPS2Q86UW7 1296 aa22.05■■□□□ 1.12
C1orf43-207ENST00000470180 CCDC136Q96JN2 1154 aa22.03■■□□□ 1.12
C1orf43-207ENST00000470180 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
C1orf43-207ENST00000470180 IGSF1Q8N6C5 1336 aa22.03■■□□□ 1.12
C1orf43-207ENST00000470180 EXOSC9Q06265 439 aaKnown RBP22.03■■□□□ 1.12
C1orf43-207ENST00000470180 KCNH5Q8NCM2 988 aa22.03■■□□□ 1.12
C1orf43-207ENST00000470180 KDRP35968 1356 aa22.02■■□□□ 1.12
C1orf43-207ENST00000470180 MSH6P52701 1360 aa22.02■■□□□ 1.12
C1orf43-207ENST00000470180 ZNF335Q9H4Z2 1342 aaPredicted RBP22.02■■□□□ 1.12
C1orf43-207ENST00000470180 RTL1A6NKG5 1358 aa22.01■■□□□ 1.11
C1orf43-207ENST00000470180 IP6K1Q92551 441 aa22.01■■□□□ 1.11
C1orf43-207ENST00000470180 SLIT3O75094 1523 aa22■■□□□ 1.11
C1orf43-207ENST00000470180 GCP02774 474 aa22■■□□□ 1.11
C1orf43-207ENST00000470180 DDX17Q92841 729 aaKnown RBP22■■□□□ 1.11
C1orf43-207ENST00000470180 ALS2Q96Q42 1657 aa21.99■■□□□ 1.11
C1orf43-207ENST00000470180 USP19O94966 1318 aa21.99■■□□□ 1.11
C1orf43-207ENST00000470180 FAM83GA6ND36 823 aa21.99■■□□□ 1.11
C1orf43-207ENST00000470180 CT47B1P0C2W7 299 aaPredicted RBP21.99■■□□□ 1.11
C1orf43-207ENST00000470180 LMOD3Q0VAK6 560 aa21.99■■□□□ 1.11
C1orf43-207ENST00000470180 ZNF853P0CG23 659 aa21.98■■□□□ 1.11
C1orf43-207ENST00000470180 PHRF1Q9P1Y6 1649 aaKnown RBP21.98■■□□□ 1.11
C1orf43-207ENST00000470180 LMOD2Q6P5Q4 547 aa21.98■■□□□ 1.11
C1orf43-207ENST00000470180 CALD1Q05682 793 aaKnown RBP21.97■■□□□ 1.11
C1orf43-207ENST00000470180 DCTN1Q14203 1278 aa21.96■■□□□ 1.11
C1orf43-207ENST00000470180 ARHGEF25Q86VW2 580 aa21.96■■□□□ 1.11
C1orf43-207ENST00000470180 LTV1Q96GA3 475 aaPredicted RBP21.96■■□□□ 1.11
C1orf43-207ENST00000470180 IFT57Q9NWB7 429 aa21.96■■□□□ 1.11
C1orf43-207ENST00000470180 LAS1LQ9Y4W2 734 aaKnown RBP21.96■■□□□ 1.11
C1orf43-207ENST00000470180 GNAI1P63096 354 aa21.94■■□□□ 1.1
C1orf43-207ENST00000470180 PDE3AQ14432 1141 aa21.94■■□□□ 1.1
C1orf43-207ENST00000470180 MTHFSDQ2M296 383 aaKnown RBP21.94■■□□□ 1.1
C1orf43-207ENST00000470180 BCL2L13Q9BXK5 485 aa21.94■■□□□ 1.1
C1orf43-207ENST00000470180 NPHP3Q7Z494 1330 aa21.93■■□□□ 1.1
C1orf43-207ENST00000470180 PLEKHG5O94827 1062 aa21.93■■□□□ 1.1
C1orf43-207ENST00000470180 CFAP44Q96MT7 982 aa21.93■■□□□ 1.1
C1orf43-207ENST00000470180 FRAT1Q92837 279 aaPredicted RBP21.92■■□□□ 1.1
C1orf43-207ENST00000470180 TSHZ2Q9NRE2 1034 aa21.92■■□□□ 1.1
C1orf43-207ENST00000470180 MED1Q15648 1581 aaPredicted RBP21.92■■□□□ 1.1
C1orf43-207ENST00000470180 MBIPQ9NS73 344 aa21.92■■□□□ 1.1
C1orf43-207ENST00000470180 ZBTB7CA1YPR0 619 aa21.91■■□□□ 1.1
C1orf43-207ENST00000470180 PXDNQ92626 1479 aa21.91■■□□□ 1.1
C1orf43-207ENST00000470180 NBPF6Q5VWK0 638 aa21.9■■□□□ 1.1
C1orf43-207ENST00000470180 BRINP3Q76B58 766 aa21.9■■□□□ 1.1
C1orf43-207ENST00000470180 SSH1Q8WYL5 1049 aa21.9■■□□□ 1.1
C1orf43-207ENST00000470180 NBPF4Q96M43 638 aa21.9■■□□□ 1.1
C1orf43-207ENST00000470180 RGPD2P0DJD1 1756 aa21.9■■□□□ 1.1
C1orf43-207ENST00000470180 MCM10Q7L590 875 aa21.9■■□□□ 1.1
C1orf43-207ENST00000470180 TNNQ9UQP3 1299 aa21.9■■□□□ 1.1
C1orf43-207ENST00000470180 USHBP1Q8N6Y0 703 aa21.89■■□□□ 1.09
C1orf43-207ENST00000470180 PANK1Q8TE04 598 aa21.89■■□□□ 1.09
C1orf43-207ENST00000470180 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
C1orf43-207ENST00000470180 SLAIN2Q9P270 581 aa21.88■■□□□ 1.09
C1orf43-207ENST00000470180 AXIN2Q9Y2T1 843 aa21.88■■□□□ 1.09
C1orf43-207ENST00000470180 VAMP4O75379 141 aa21.87■■□□□ 1.09
C1orf43-207ENST00000470180 TSPYL6Q8N831 410 aa21.87■■□□□ 1.09
C1orf43-207ENST00000470180 GAS2L2Q8NHY3 880 aa21.87■■□□□ 1.09
C1orf43-207ENST00000470180 SPATA31A3Q5VYP0 1347 aa21.87■■□□□ 1.09
C1orf43-207ENST00000470180 CRB1P82279 1406 aa21.87■■□□□ 1.09
C1orf43-207ENST00000470180 CHL1O00533 1208 aa21.86■■□□□ 1.09
C1orf43-207ENST00000470180 RLBP1P12271 317 aa21.86■■□□□ 1.09
C1orf43-207ENST00000470180 SMC4Q9NTJ3 1288 aa21.86■■□□□ 1.09
C1orf43-207ENST00000470180 TNS3Q68CZ2 1445 aa21.86■■□□□ 1.09
C1orf43-207ENST00000470180 LRRC59Q96AG4 307 aaKnown RBP21.86■■□□□ 1.09
C1orf43-207ENST00000470180 C8orf58Q8NAV2 365 aa21.85■■□□□ 1.09
C1orf43-207ENST00000470180 RGPD5Q99666 1765 aa21.85■■□□□ 1.09
C1orf43-207ENST00000470180 ZC3H6P61129 1189 aaKnown RBP21.84■■□□□ 1.09
C1orf43-207ENST00000470180 ALDH1L2Q3SY69 923 aa21.84■■□□□ 1.09
C1orf43-207ENST00000470180 ZNF428Q96B54 188 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms