RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 CGNL1Q0VF96 1302 aa11.49□□□□□ -0.57
TRAPPC3-206ENST00000469757 CRB1P82279 1406 aa11.49□□□□□ -0.57
TRAPPC3-206ENST00000469757 LRRC37A3O60309 1634 aa11.49□□□□□ -0.57
TRAPPC3-206ENST00000469757 ZC3H6P61129 1189 aaKnown RBP11.48□□□□□ -0.57
TRAPPC3-206ENST00000469757 CHRNA2Q15822 529 aa11.48□□□□□ -0.57
TRAPPC3-206ENST00000469757 GJD4Q96KN9 370 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC3-206ENST00000469757 SPATA31A5Q5VU36 1347 aa11.48□□□□□ -0.57
TRAPPC3-206ENST00000469757 SPATA31A7Q8IWB4 1347 aa11.48□□□□□ -0.57
TRAPPC3-206ENST00000469757 BRWD3Q6RI45 1802 aa11.47□□□□□ -0.57
TRAPPC3-206ENST00000469757 NPC1L1Q9UHC9 1359 aa11.47□□□□□ -0.57
TRAPPC3-206ENST00000469757 DISP2A7MBM2 1401 aa11.46□□□□□ -0.57
TRAPPC3-206ENST00000469757 ERBB3P21860 1342 aa11.46□□□□□ -0.57
TRAPPC3-206ENST00000469757 SPATA31A1Q5TZJ5 1347 aa11.46□□□□□ -0.57
TRAPPC3-206ENST00000469757 ONECUT3O60422 494 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC3-206ENST00000469757 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
TRAPPC3-206ENST00000469757 ZEB1P37275 1124 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC3-206ENST00000469757 COG3Q96JB2 828 aa11.46□□□□□ -0.57
TRAPPC3-206ENST00000469757 NCAPD2Q15021 1401 aa11.45□□□□□ -0.58
TRAPPC3-206ENST00000469757 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
TRAPPC3-206ENST00000469757 WDR17Q8IZU2 1322 aa11.45□□□□□ -0.58
TRAPPC3-206ENST00000469757 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
TRAPPC3-206ENST00000469757 PANK3Q9H999 370 aa11.44□□□□□ -0.58
TRAPPC3-206ENST00000469757 FLT4P35916 1363 aa11.43□□□□□ -0.58
TRAPPC3-206ENST00000469757 EP400Q96L91 3159 aa11.43□□□□□ -0.58
TRAPPC3-206ENST00000469757 SOCS7O14512 581 aa11.43□□□□□ -0.58
TRAPPC3-206ENST00000469757 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC3-206ENST00000469757 BARGINQ6ZT62 677 aa11.43□□□□□ -0.58
TRAPPC3-206ENST00000469757 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
TRAPPC3-206ENST00000469757 INSRP06213 1382 aa11.42□□□□□ -0.58
TRAPPC3-206ENST00000469757 PER1O15534 1290 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC3-206ENST00000469757 LARP1Q6PKG0 1096 aaKnown RBP11.42□□□□□ -0.58
TRAPPC3-206ENST00000469757 THRAP3Q9Y2W1 955 aaKnown RBP11.42□□□□□ -0.58
TRAPPC3-206ENST00000469757 RGPD1P0DJD0 1748 aa11.41□□□□□ -0.58
TRAPPC3-206ENST00000469757 SOX12O15370 315 aa11.41□□□□□ -0.58
TRAPPC3-206ENST00000469757 IP6K1Q92551 441 aa11.41□□□□□ -0.58
TRAPPC3-206ENST00000469757 POLR3GLQ9BT43 218 aa11.41□□□□□ -0.58
TRAPPC3-206ENST00000469757 MAP2P11137 1827 aaKnown RBP11.41□□□□□ -0.58
TRAPPC3-206ENST00000469757 TNS2Q63HR2 1409 aa11.41□□□□□ -0.58
TRAPPC3-206ENST00000469757 HOXC9P31274 260 aa11.4□□□□□ -0.58
TRAPPC3-206ENST00000469757 STRN4Q9NRL3 753 aa11.4□□□□□ -0.58
TRAPPC3-206ENST00000469757 SHANK3Q9BYB0 1731 aa11.4□□□□□ -0.58
TRAPPC3-206ENST00000469757 TNS1Q9HBL0 1735 aaKnown RBP11.4□□□□□ -0.58
TRAPPC3-206ENST00000469757 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
TRAPPC3-206ENST00000469757 PKD1L3Q7Z443 1732 aa11.39□□□□□ -0.59
TRAPPC3-206ENST00000469757 TCP11L2Q8N4U5 519 aa11.39□□□□□ -0.59
TRAPPC3-206ENST00000469757 CARD10Q9BWT7 1032 aa11.39□□□□□ -0.59
TRAPPC3-206ENST00000469757 KNSTRNQ9Y448 316 aa11.39□□□□□ -0.59
TRAPPC3-206ENST00000469757 PLEKHG2Q9H7P9 1386 aa11.39□□□□□ -0.59
TRAPPC3-206ENST00000469757 BCL9O00512 1426 aa11.38□□□□□ -0.59
TRAPPC3-206ENST00000469757 RRS1Q15050 365 aaKnown RBP11.38□□□□□ -0.59
TRAPPC3-206ENST00000469757 FAM98CQ17RN3 349 aaKnown RBP11.38□□□□□ -0.59
TRAPPC3-206ENST00000469757 SEPT12Q8IYM1 358 aa11.38□□□□□ -0.59
TRAPPC3-206ENST00000469757 EVA1CP58658 441 aa11.37□□□□□ -0.59
TRAPPC3-206ENST00000469757 ANKRD24Q8TF21 1146 aa11.37□□□□□ -0.59
TRAPPC3-206ENST00000469757 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
TRAPPC3-206ENST00000469757 COL3A1P02461 1466 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC3-206ENST00000469757 RGPD3A6NKT7 1758 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC3-206ENST00000469757 RGPD4Q7Z3J3 1758 aa11.36□□□□□ -0.59
TRAPPC3-206ENST00000469757 OVOS2A0A0G2JMS6 1433 aa11.36□□□□□ -0.59
TRAPPC3-206ENST00000469757 MEGF6O75095 1541 aa11.36□□□□□ -0.59
TRAPPC3-206ENST00000469757 ZBTB7CA1YPR0 619 aa11.36□□□□□ -0.59
TRAPPC3-206ENST00000469757 CDCA7Q9BWT1 371 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC3-206ENST00000469757 POLKQ9UBT6 870 aa11.36□□□□□ -0.59
TRAPPC3-206ENST00000469757 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
TRAPPC3-206ENST00000469757 FBLN1P23142 703 aa11.35□□□□□ -0.59
TRAPPC3-206ENST00000469757 AMPHP49418 695 aa11.35□□□□□ -0.59
TRAPPC3-206ENST00000469757 TOM1L2Q6ZVM7 507 aa11.35□□□□□ -0.59
TRAPPC3-206ENST00000469757 NHSQ6T4R5 1651 aa11.34□□□□□ -0.59
TRAPPC3-206ENST00000469757 KRT27Q7Z3Y8 459 aa11.34□□□□□ -0.59
TRAPPC3-206ENST00000469757 SBF2Q86WG5 1849 aa11.33□□□□□ -0.6
TRAPPC3-206ENST00000469757 PARD3Q8TEW0 1356 aa11.33□□□□□ -0.6
TRAPPC3-206ENST00000469757 CSB-PGBD3P0DP91 1061 aa11.33□□□□□ -0.6
TRAPPC3-206ENST00000469757 HSP90AB2PQ58FF8 381 aa11.33□□□□□ -0.6
TRAPPC3-206ENST00000469757 MORC1Q86VD1 984 aa11.33□□□□□ -0.6
TRAPPC3-206ENST00000469757 USP35Q9P2H5 1018 aa11.32□□□□□ -0.6
TRAPPC3-206ENST00000469757 KDRP35968 1356 aa11.31□□□□□ -0.6
TRAPPC3-206ENST00000469757 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAPPC3-206ENST00000469757 NLRP2Q9NX02 1062 aa11.31□□□□□ -0.6
TRAPPC3-206ENST00000469757 IGSF1Q8N6C5 1336 aa11.31□□□□□ -0.6
TRAPPC3-206ENST00000469757 RREB1Q92766 1687 aa11.3□□□□□ -0.6
TRAPPC3-206ENST00000469757 DOT1LQ8TEK3 1739 aa11.3□□□□□ -0.6
TRAPPC3-206ENST00000469757 IL2RBP14784 551 aa11.3□□□□□ -0.6
TRAPPC3-206ENST00000469757 A0A0G2JS52 829 aa11.29□□□□□ -0.6
TRAPPC3-206ENST00000469757 MYT1Q01538 1121 aa11.29□□□□□ -0.6
TRAPPC3-206ENST00000469757 DDB1Q16531 1140 aa11.29□□□□□ -0.6
TRAPPC3-206ENST00000469757 NBPF6Q5VWK0 638 aa11.29□□□□□ -0.6
TRAPPC3-206ENST00000469757 NBPF4Q96M43 638 aa11.29□□□□□ -0.6
TRAPPC3-206ENST00000469757 TOGARAM1Q9Y4F4 1720 aa11.29□□□□□ -0.6
TRAPPC3-206ENST00000469757 TNNT2P45379 298 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC3-206ENST00000469757 EIF4A2Q14240 407 aaKnown RBP11.28□□□□□ -0.6
TRAPPC3-206ENST00000469757 CC2D1BQ5T0F9 858 aaKnown RBP11.28□□□□□ -0.6
TRAPPC3-206ENST00000469757 CCDC125Q86Z20 511 aa11.28□□□□□ -0.6
TRAPPC3-206ENST00000469757 LTV1Q96GA3 475 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC3-206ENST00000469757 FAM196AQ6ZSG2 479 aa11.27□□□□□ -0.61
TRAPPC3-206ENST00000469757 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.61
TRAPPC3-206ENST00000469757 PPM1GO15355 546 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC3-206ENST00000469757 PDE3BQ13370 1112 aa11.26□□□□□ -0.61
TRAPPC3-206ENST00000469757 MARCH10Q8NA82 808 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC3-206ENST00000469757 EYA1Q99502 592 aa11.26□□□□□ -0.61
TRAPPC3-206ENST00000469757 NUP188Q5SRE5 1749 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 338.8 ms