RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 KIAA1210Q9ULL0 1709 aa18.6■□□□□ 0.57
TRAPPC12-216ENST00000469400 LRRC37A3O60309 1634 aa18.6■□□□□ 0.57
TRAPPC12-216ENST00000469400 ZBTB7AO95365 584 aa18.6■□□□□ 0.57
TRAPPC12-216ENST00000469400 SLIT3O75094 1523 aa18.59■□□□□ 0.57
TRAPPC12-216ENST00000469400 WDR17Q8IZU2 1322 aa18.59■□□□□ 0.57
TRAPPC12-216ENST00000469400 BCL9O00512 1426 aa18.58■□□□□ 0.57
TRAPPC12-216ENST00000469400 PTGER2P43116 358 aa18.58■□□□□ 0.56
TRAPPC12-216ENST00000469400 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC12-216ENST00000469400 SBF2Q86WG5 1849 aa18.58■□□□□ 0.56
TRAPPC12-216ENST00000469400 CASZ1Q86V15 1759 aa18.58■□□□□ 0.56
TRAPPC12-216ENST00000469400 ATF5Q9Y2D1 282 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC12-216ENST00000469400 ARHGEF25Q86VW2 580 aa18.56■□□□□ 0.56
TRAPPC12-216ENST00000469400 COL18A1P39060 1754 aa18.55■□□□□ 0.56
TRAPPC12-216ENST00000469400 TXNRD1Q16881 649 aa18.55■□□□□ 0.56
TRAPPC12-216ENST00000469400 CARD10Q9BWT7 1032 aa18.55■□□□□ 0.56
TRAPPC12-216ENST00000469400 STK32BQ9NY57 414 aa18.55■□□□□ 0.56
TRAPPC12-216ENST00000469400 CPSF1Q10570 1443 aaKnown RBP18.55■□□□□ 0.56
TRAPPC12-216ENST00000469400 CSB-PGBD3P0DP91 1061 aa18.54■□□□□ 0.56
TRAPPC12-216ENST00000469400 SLC15A2Q16348 729 aa18.53■□□□□ 0.56
TRAPPC12-216ENST00000469400 ZNF784Q8NCA9 323 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC12-216ENST00000469400 KCNH5Q8NCM2 988 aa18.53■□□□□ 0.56
TRAPPC12-216ENST00000469400 EXOC5O00471 708 aa18.52■□□□□ 0.56
TRAPPC12-216ENST00000469400 SOX12O15370 315 aa18.52■□□□□ 0.56
TRAPPC12-216ENST00000469400 SYT17Q9BSW7 474 aa18.52■□□□□ 0.56
TRAPPC12-216ENST00000469400 FHDC1Q9C0D6 1143 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC12-216ENST00000469400 PIK3C2AO00443 1686 aa18.52■□□□□ 0.56
TRAPPC12-216ENST00000469400 UTRNP46939 3433 aa18.52■□□□□ 0.55
TRAPPC12-216ENST00000469400 TTC21BQ7Z4L5 1316 aa18.51■□□□□ 0.55
TRAPPC12-216ENST00000469400 EVC2Q86UK5 1308 aa18.51■□□□□ 0.55
TRAPPC12-216ENST00000469400 MYOM1P52179 1685 aa18.5■□□□□ 0.55
TRAPPC12-216ENST00000469400 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
TRAPPC12-216ENST00000469400 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC12-216ENST00000469400 MTFR1LQ9H019 292 aa18.5■□□□□ 0.55
TRAPPC12-216ENST00000469400 WNK3Q9BYP7 1800 aa18.49■□□□□ 0.55
TRAPPC12-216ENST00000469400 SGIP1Q9BQI5 828 aa18.49■□□□□ 0.55
TRAPPC12-216ENST00000469400 AKAP12Q02952 1782 aa18.47■□□□□ 0.55
TRAPPC12-216ENST00000469400 CCDC7Q96M83 1385 aa18.47■□□□□ 0.55
TRAPPC12-216ENST00000469400 TTC21AQ8NDW8 1320 aa18.47■□□□□ 0.55
TRAPPC12-216ENST00000469400 ACSBG1Q96GR2 724 aa18.45■□□□□ 0.54
TRAPPC12-216ENST00000469400 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
TRAPPC12-216ENST00000469400 L3MBTL2Q969R5 705 aa18.44■□□□□ 0.54
TRAPPC12-216ENST00000469400 ARXQ96QS3 562 aa18.44■□□□□ 0.54
TRAPPC12-216ENST00000469400 RGPD5Q99666 1765 aa18.44■□□□□ 0.54
TRAPPC12-216ENST00000469400 NFAT5O94916 1531 aa18.44■□□□□ 0.54
TRAPPC12-216ENST00000469400 TRPM1Q7Z4N2 1603 aa18.42■□□□□ 0.54
TRAPPC12-216ENST00000469400 KTN1Q86UP2 1357 aaKnown RBP18.42■□□□□ 0.54
TRAPPC12-216ENST00000469400 NLRP2Q9NX02 1062 aa18.41■□□□□ 0.54
TRAPPC12-216ENST00000469400 ERBB3P21860 1342 aa18.4■□□□□ 0.54
TRAPPC12-216ENST00000469400 ABCC6O95255 1503 aa18.39■□□□□ 0.54
TRAPPC12-216ENST00000469400 NHSQ6T4R5 1651 aa18.39■□□□□ 0.53
TRAPPC12-216ENST00000469400 IL2RBP14784 551 aa18.39■□□□□ 0.53
TRAPPC12-216ENST00000469400 ZNF827Q17R98 1081 aa18.39■□□□□ 0.53
TRAPPC12-216ENST00000469400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.39■□□□□ 0.53
TRAPPC12-216ENST00000469400 MAP3K5Q99683 1374 aa18.39■□□□□ 0.53
TRAPPC12-216ENST00000469400 SENP3-EIF4A1A0A087X0R7 540 aa18.38■□□□□ 0.53
TRAPPC12-216ENST00000469400 C1QTNF8P60827 252 aa18.38■□□□□ 0.53
TRAPPC12-216ENST00000469400 LRRC4BQ9NT99 713 aa18.38■□□□□ 0.53
TRAPPC12-216ENST00000469400 ROCK2O75116 1388 aaKnown RBP18.38■□□□□ 0.53
TRAPPC12-216ENST00000469400 USP31Q70CQ4 1352 aa18.37■□□□□ 0.53
TRAPPC12-216ENST00000469400 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
TRAPPC12-216ENST00000469400 NME9Q86XW9 330 aa18.36■□□□□ 0.53
TRAPPC12-216ENST00000469400 GPR162Q16538 588 aa18.35■□□□□ 0.53
TRAPPC12-216ENST00000469400 ANKRD24Q8TF21 1146 aa18.35■□□□□ 0.53
TRAPPC12-216ENST00000469400 CHD4Q14839 1912 aa18.34■□□□□ 0.53
TRAPPC12-216ENST00000469400 AKT1S1Q96B36 256 aa18.34■□□□□ 0.53
TRAPPC12-216ENST00000469400 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.52
TRAPPC12-216ENST00000469400 SBNO2Q9Y2G9 1366 aa18.32■□□□□ 0.52
TRAPPC12-216ENST00000469400 SLC16A10Q8TF71 515 aa18.32■□□□□ 0.52
TRAPPC12-216ENST00000469400 BTAF1O14981 1849 aa18.32■□□□□ 0.52
TRAPPC12-216ENST00000469400 SLC27A3Q5K4L6 730 aa18.31■□□□□ 0.52
TRAPPC12-216ENST00000469400 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
TRAPPC12-216ENST00000469400 MON2Q7Z3U7 1717 aa18.3■□□□□ 0.52
TRAPPC12-216ENST00000469400 POLD1P28340 1107 aa18.3■□□□□ 0.52
TRAPPC12-216ENST00000469400 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
TRAPPC12-216ENST00000469400 CD163L1Q9NR16 1453 aa18.3■□□□□ 0.52
TRAPPC12-216ENST00000469400 PNPLA7Q6ZV29 1317 aa18.29■□□□□ 0.52
TRAPPC12-216ENST00000469400 KAT6BQ8WYB5 2073 aa18.29■□□□□ 0.52
TRAPPC12-216ENST00000469400 TMC1Q8TDI8 760 aa18.29■□□□□ 0.52
TRAPPC12-216ENST00000469400 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
TRAPPC12-216ENST00000469400 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC12-216ENST00000469400 PELP1Q8IZL8 1130 aaKnown RBP18.28■□□□□ 0.52
TRAPPC12-216ENST00000469400 SLC12A5Q9H2X9 1139 aa18.28■□□□□ 0.52
TRAPPC12-216ENST00000469400 USP54Q70EL1 1684 aa18.28■□□□□ 0.52
TRAPPC12-216ENST00000469400 KCNQ4P56696 695 aa18.27■□□□□ 0.52
TRAPPC12-216ENST00000469400 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
TRAPPC12-216ENST00000469400 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-216ENST00000469400 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
TRAPPC12-216ENST00000469400 IP6K1Q92551 441 aa18.26■□□□□ 0.51
TRAPPC12-216ENST00000469400 LTV1Q96GA3 475 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC12-216ENST00000469400 LTN1O94822 1766 aa18.26■□□□□ 0.51
TRAPPC12-216ENST00000469400 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
TRAPPC12-216ENST00000469400 SYTL4Q96C24 671 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC12-216ENST00000469400 EDC4Q6P2E9 1401 aaKnown RBP18.24■□□□□ 0.51
TRAPPC12-216ENST00000469400 GOLGB1Q14789 3259 aaKnown RBP18.24■□□□□ 0.51
TRAPPC12-216ENST00000469400 TERF2IPQ9NYB0 399 aa18.23■□□□□ 0.51
TRAPPC12-216ENST00000469400 A0A1W2PP64 1363 aa18.22■□□□□ 0.51
TRAPPC12-216ENST00000469400 ANKRD36BQ8N2N9 1353 aa18.22■□□□□ 0.51
TRAPPC12-216ENST00000469400 CARD11Q9BXL7 1154 aa18.22■□□□□ 0.51
TRAPPC12-216ENST00000469400 QSER1Q2KHR3 1735 aa18.21■□□□□ 0.51
TRAPPC12-216ENST00000469400 NSD2O96028 1365 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms