RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 EVA1CP58658 441 aa11.72□□□□□ -0.53
SSBP1-208ENST00000469123 CHRNA2Q15822 529 aa11.72□□□□□ -0.53
SSBP1-208ENST00000469123 CAMTA1Q9Y6Y1 1673 aa11.71□□□□□ -0.53
SSBP1-208ENST00000469123 GGNBP2Q9H3C7 697 aa11.71□□□□□ -0.53
SSBP1-208ENST00000469123 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.53
SSBP1-208ENST00000469123 SPATA31A5Q5VU36 1347 aa11.7□□□□□ -0.54
SSBP1-208ENST00000469123 SPATA31A7Q8IWB4 1347 aa11.7□□□□□ -0.54
SSBP1-208ENST00000469123 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
SSBP1-208ENST00000469123 CCDC9Q9Y3X0 531 aaKnown RBP11.7□□□□□ -0.54
SSBP1-208ENST00000469123 FAM208AQ9UK61 1670 aaKnown RBP11.7□□□□□ -0.54
SSBP1-208ENST00000469123 CRB1P82279 1406 aa11.69□□□□□ -0.54
SSBP1-208ENST00000469123 WDR17Q8IZU2 1322 aa11.69□□□□□ -0.54
SSBP1-208ENST00000469123 SOX12O15370 315 aa11.69□□□□□ -0.54
SSBP1-208ENST00000469123 ONECUT3O60422 494 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-208ENST00000469123 IP6K1Q92551 441 aa11.69□□□□□ -0.54
SSBP1-208ENST00000469123 GLI3P10071 1580 aa11.69□□□□□ -0.54
SSBP1-208ENST00000469123 MAP3K19Q56UN5 1328 aa11.68□□□□□ -0.54
SSBP1-208ENST00000469123 SPATA31A1Q5TZJ5 1347 aa11.68□□□□□ -0.54
SSBP1-208ENST00000469123 ZBTB7CA1YPR0 619 aa11.68□□□□□ -0.54
SSBP1-208ENST00000469123 AMPHP49418 695 aa11.68□□□□□ -0.54
SSBP1-208ENST00000469123 BARGINQ6ZT62 677 aa11.68□□□□□ -0.54
SSBP1-208ENST00000469123 CDCA7Q9BWT1 371 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-208ENST00000469123 STRN4Q9NRL3 753 aa11.68□□□□□ -0.54
SSBP1-208ENST00000469123 RGPD5Q99666 1765 aa11.68□□□□□ -0.54
SSBP1-208ENST00000469123 RGS12O14924 1447 aa11.68□□□□□ -0.54
SSBP1-208ENST00000469123 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
SSBP1-208ENST00000469123 FLT4P35916 1363 aa11.67□□□□□ -0.54
SSBP1-208ENST00000469123 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
SSBP1-208ENST00000469123 ERBB3P21860 1342 aa11.67□□□□□ -0.54
SSBP1-208ENST00000469123 PER1O15534 1290 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-208ENST00000469123 CSB-PGBD3P0DP91 1061 aa11.67□□□□□ -0.54
SSBP1-208ENST00000469123 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-208ENST00000469123 ILDR2Q71H61 639 aa11.67□□□□□ -0.54
SSBP1-208ENST00000469123 TCP11L2Q8N4U5 519 aa11.67□□□□□ -0.54
SSBP1-208ENST00000469123 TOM1L2Q6ZVM7 507 aa11.66□□□□□ -0.54
SSBP1-208ENST00000469123 MORC1Q86VD1 984 aa11.66□□□□□ -0.54
SSBP1-208ENST00000469123 CARD10Q9BWT7 1032 aa11.66□□□□□ -0.54
SSBP1-208ENST00000469123 AXIN2Q9Y2T1 843 aa11.66□□□□□ -0.54
SSBP1-208ENST00000469123 HOXC9P31274 260 aa11.65□□□□□ -0.54
SSBP1-208ENST00000469123 LARP1Q6PKG0 1096 aaKnown RBP11.65□□□□□ -0.54
SSBP1-208ENST00000469123 INSRP06213 1382 aa11.65□□□□□ -0.55
SSBP1-208ENST00000469123 THSD7AQ9UPZ6 1657 aa11.65□□□□□ -0.55
SSBP1-208ENST00000469123 ANKRD24Q8TF21 1146 aa11.64□□□□□ -0.55
SSBP1-208ENST00000469123 WNK3Q9BYP7 1800 aa11.63□□□□□ -0.55
SSBP1-208ENST00000469123 SOCS7O14512 581 aa11.63□□□□□ -0.55
SSBP1-208ENST00000469123 RRS1Q15050 365 aaKnown RBP11.63□□□□□ -0.55
SSBP1-208ENST00000469123 FAM98CQ17RN3 349 aaKnown RBP11.63□□□□□ -0.55
SSBP1-208ENST00000469123 SEPT12Q8IYM1 358 aa11.63□□□□□ -0.55
SSBP1-208ENST00000469123 PARP4Q9UKK3 1724 aaKnown RBP11.63□□□□□ -0.55
SSBP1-208ENST00000469123 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
SSBP1-208ENST00000469123 PEAK1Q9H792 1746 aa11.61□□□□□ -0.55
SSBP1-208ENST00000469123 A0A0G2JS52 829 aa11.61□□□□□ -0.55
SSBP1-208ENST00000469123 KRT27Q7Z3Y8 459 aa11.61□□□□□ -0.55
SSBP1-208ENST00000469123 NLRP2Q9NX02 1062 aa11.61□□□□□ -0.55
SSBP1-208ENST00000469123 USP35Q9P2H5 1018 aa11.61□□□□□ -0.55
SSBP1-208ENST00000469123 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
SSBP1-208ENST00000469123 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
SSBP1-208ENST00000469123 EMILIN1Q9Y6C2 1016 aa11.6□□□□□ -0.55
SSBP1-208ENST00000469123 PPM1GO15355 546 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-208ENST00000469123 PDE3BQ13370 1112 aa11.59□□□□□ -0.55
SSBP1-208ENST00000469123 CC2D1BQ5T0F9 858 aaKnown RBP11.59□□□□□ -0.55
SSBP1-208ENST00000469123 CCDC125Q86Z20 511 aa11.59□□□□□ -0.55
SSBP1-208ENST00000469123 DISP2A7MBM2 1401 aa11.59□□□□□ -0.55
SSBP1-208ENST00000469123 IL2RBP14784 551 aa11.58□□□□□ -0.56
SSBP1-208ENST00000469123 FBLN1P23142 703 aa11.58□□□□□ -0.56
SSBP1-208ENST00000469123 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
SSBP1-208ENST00000469123 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.56
SSBP1-208ENST00000469123 LRRC37A3O60309 1634 aa11.57□□□□□ -0.56
SSBP1-208ENST00000469123 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
SSBP1-208ENST00000469123 DDB1Q16531 1140 aa11.57□□□□□ -0.56
SSBP1-208ENST00000469123 LTV1Q96GA3 475 aaPredicted RBP11.57□□□□□ -0.56
SSBP1-208ENST00000469123 NCAPD2Q15021 1401 aa11.57□□□□□ -0.56
SSBP1-208ENST00000469123 TNS2Q63HR2 1409 aa11.57□□□□□ -0.56
SSBP1-208ENST00000469123 EXOC5O00471 708 aa11.56□□□□□ -0.56
SSBP1-208ENST00000469123 BCL9O00512 1426 aa11.56□□□□□ -0.56
SSBP1-208ENST00000469123 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
SSBP1-208ENST00000469123 OVOS2A0A0G2JMS6 1433 aa11.55□□□□□ -0.56
SSBP1-208ENST00000469123 RGPD2P0DJD1 1756 aa11.55□□□□□ -0.56
SSBP1-208ENST00000469123 RALBP1Q15311 655 aa11.55□□□□□ -0.56
SSBP1-208ENST00000469123 RAPGEF4Q8WZA2 1011 aa11.55□□□□□ -0.56
SSBP1-208ENST00000469123 CFAP53Q96M91 514 aa11.55□□□□□ -0.56
SSBP1-208ENST00000469123 PARD3Q8TEW0 1356 aa11.54□□□□□ -0.56
SSBP1-208ENST00000469123 MTHFSP49914 203 aa11.54□□□□□ -0.56
SSBP1-208ENST00000469123 DDX10Q13206 875 aaKnown RBP11.54□□□□□ -0.56
SSBP1-208ENST00000469123 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
SSBP1-208ENST00000469123 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
SSBP1-208ENST00000469123 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
SSBP1-208ENST00000469123 IGSF1Q8N6C5 1336 aa11.54□□□□□ -0.56
SSBP1-208ENST00000469123 RGPD1P0DJD0 1748 aa11.53□□□□□ -0.56
SSBP1-208ENST00000469123 TATP17735 454 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-208ENST00000469123 SF3B2Q13435 895 aaKnown RBP11.53□□□□□ -0.56
SSBP1-208ENST00000469123 UPF1Q92900 1129 aaKnown RBP eCLIP11.52□□□□□ -0.57
SSBP1-208ENST00000469123 EYA1Q99502 592 aa11.52□□□□□ -0.57
SSBP1-208ENST00000469123 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.52□□□□□ -0.572e-7■■□□□ 12.8
SSBP1-208ENST00000469123 KAT6BQ8WYB5 2073 aa11.51□□□□□ -0.57
SSBP1-208ENST00000469123 DIAPH1O60610 1272 aaKnown RBP11.51□□□□□ -0.57
SSBP1-208ENST00000469123 NUDCQ9Y266 331 aa11.51□□□□□ -0.57
SSBP1-208ENST00000469123 PCDH11XQ9BZA7 1347 aa11.51□□□□□ -0.57
SSBP1-208ENST00000469123 PCDH11YQ9BZA8 1340 aa11.51□□□□□ -0.57
SSBP1-208ENST00000469123 MEGF6O75095 1541 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms