RNA–Protein interactions for RNA: ENST00000468810.1

RPS27A-206, Transcript of ribosomal protein S27a, humanhuman

TSL 3

Gene RPS27A, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-206ENST00000468810 RASEFQ8IZ41 740 aa13.52□□□□□ -0.25
RPS27A-206ENST00000468810 CABP2Q9NPB3 220 aa13.52□□□□□ -0.25
RPS27A-206ENST00000468810 ACEP12821 1306 aa13.52□□□□□ -0.25
RPS27A-206ENST00000468810 POLR3AO14802 1390 aaPredicted RBP13.52□□□□□ -0.25
RPS27A-206ENST00000468810 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.25
RPS27A-206ENST00000468810 PLEKHG3A1L390 1219 aa13.51□□□□□ -0.25
RPS27A-206ENST00000468810 MAP3K13O43283 966 aa13.51□□□□□ -0.25
RPS27A-206ENST00000468810 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
RPS27A-206ENST00000468810 ATAD2Q6PL18 1390 aa13.5□□□□□ -0.25
RPS27A-206ENST00000468810 VPS72Q15906 364 aa13.5□□□□□ -0.25
RPS27A-206ENST00000468810 PPIP5K1Q6PFW1 1433 aa13.49□□□□□ -0.25
RPS27A-206ENST00000468810 SRPK2P78362 688 aaKnown RBP13.49□□□□□ -0.25
RPS27A-206ENST00000468810 BTG4Q9NY30 223 aa13.49□□□□□ -0.25
RPS27A-206ENST00000468810 ROCK2O75116 1388 aaKnown RBP13.47□□□□□ -0.25
RPS27A-206ENST00000468810 TIE1P35590 1138 aa13.47□□□□□ -0.25
RPS27A-206ENST00000468810 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
RPS27A-206ENST00000468810 CCDC9Q9Y3X0 531 aaKnown RBP13.47□□□□□ -0.25
RPS27A-206ENST00000468810 KIAA0232Q92628 1395 aa13.46□□□□□ -0.25
RPS27A-206ENST00000468810 NRKQ7Z2Y5 1582 aa13.46□□□□□ -0.25
RPS27A-206ENST00000468810 ONECUT3O60422 494 aaPredicted RBP13.46□□□□□ -0.25
RPS27A-206ENST00000468810 ZC3H6P61129 1189 aaKnown RBP13.46□□□□□ -0.25
RPS27A-206ENST00000468810 CHRNA2Q15822 529 aa13.46□□□□□ -0.25
RPS27A-206ENST00000468810 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
RPS27A-206ENST00000468810 PCDH10Q9P2E7 1040 aa13.46□□□□□ -0.25
RPS27A-206ENST00000468810 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
RPS27A-206ENST00000468810 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
RPS27A-206ENST00000468810 FKBP8Q14318 412 aa13.44□□□□□ -0.26
RPS27A-206ENST00000468810 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
RPS27A-206ENST00000468810 SCUBE2Q9NQ36 999 aa13.44□□□□□ -0.26
RPS27A-206ENST00000468810 PRDM11Q9NQV5 511 aa13.44□□□□□ -0.26
RPS27A-206ENST00000468810 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
RPS27A-206ENST00000468810 COLQQ9Y215 455 aaPredicted RBP13.43□□□□□ -0.26
RPS27A-206ENST00000468810 PIK3C2AO00443 1686 aa13.43□□□□□ -0.26
RPS27A-206ENST00000468810 USP19O94966 1318 aa13.42□□□□□ -0.26
RPS27A-206ENST00000468810 SPATA31A5Q5VU36 1347 aa13.42□□□□□ -0.26
RPS27A-206ENST00000468810 EVC2Q86UK5 1308 aa13.42□□□□□ -0.26
RPS27A-206ENST00000468810 SPATA31A7Q8IWB4 1347 aa13.42□□□□□ -0.26
RPS27A-206ENST00000468810 USP6P35125 1406 aa13.42□□□□□ -0.26
RPS27A-206ENST00000468810 SSH2Q76I76 1423 aa13.42□□□□□ -0.26
RPS27A-206ENST00000468810 LMO7Q8WWI1 1683 aa13.42□□□□□ -0.26
RPS27A-206ENST00000468810 THSD7AQ9UPZ6 1657 aa13.42□□□□□ -0.26
RPS27A-206ENST00000468810 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
RPS27A-206ENST00000468810 TTLL13PA6NNM8 815 aa13.41□□□□□ -0.26
RPS27A-206ENST00000468810 MIER1Q8N108 512 aa13.41□□□□□ -0.26
RPS27A-206ENST00000468810 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
RPS27A-206ENST00000468810 FAM182BQ5T319 152 aa13.4□□□□□ -0.26
RPS27A-206ENST00000468810 KRT27Q7Z3Y8 459 aa13.4□□□□□ -0.26
RPS27A-206ENST00000468810 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
RPS27A-206ENST00000468810 STRN4Q9NRL3 753 aa13.4□□□□□ -0.26
RPS27A-206ENST00000468810 TONSLQ96HA7 1378 aa13.4□□□□□ -0.26
RPS27A-206ENST00000468810 RGPD5Q99666 1765 aa13.4□□□□□ -0.26
RPS27A-206ENST00000468810 A0A0G2JS52 829 aa13.39□□□□□ -0.27
RPS27A-206ENST00000468810 MYT1Q01538 1121 aa13.39□□□□□ -0.27
RPS27A-206ENST00000468810 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
RPS27A-206ENST00000468810 COL18A1P39060 1754 aa13.39□□□□□ -0.27
RPS27A-206ENST00000468810 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
RPS27A-206ENST00000468810 SPATA31A1Q5TZJ5 1347 aa13.39□□□□□ -0.27
RPS27A-206ENST00000468810 CPDO75976 1380 aa13.38□□□□□ -0.27
RPS27A-206ENST00000468810 GCP02774 474 aa13.38□□□□□ -0.27
RPS27A-206ENST00000468810 DEFB132Q7Z7B7 95 aa13.38□□□□□ -0.27
RPS27A-206ENST00000468810 NLRP13Q86W25 1043 aa13.38□□□□□ -0.27
RPS27A-206ENST00000468810 SLIT3O75094 1523 aa13.38□□□□□ -0.27
RPS27A-206ENST00000468810 BLMP54132 1417 aaPredicted RBP13.38□□□□□ -0.27
RPS27A-206ENST00000468810 NLRP6P59044 892 aa13.37□□□□□ -0.27
RPS27A-206ENST00000468810 LARP1Q6PKG0 1096 aaKnown RBP13.37□□□□□ -0.27
RPS27A-206ENST00000468810 CCDC125Q86Z20 511 aa13.37□□□□□ -0.27
RPS27A-206ENST00000468810 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
RPS27A-206ENST00000468810 USP35Q9P2H5 1018 aa13.36□□□□□ -0.27
RPS27A-206ENST00000468810 CPSF1Q10570 1443 aaKnown RBP13.36□□□□□ -0.27
RPS27A-206ENST00000468810 TTC21BQ7Z4L5 1316 aa13.36□□□□□ -0.27
RPS27A-206ENST00000468810 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
RPS27A-206ENST00000468810 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
RPS27A-206ENST00000468810 TNS1Q9HBL0 1735 aaKnown RBP13.34□□□□□ -0.27
RPS27A-206ENST00000468810 ZBTB7CA1YPR0 619 aa13.34□□□□□ -0.27
RPS27A-206ENST00000468810 EVA1CP58658 441 aa13.34□□□□□ -0.27
RPS27A-206ENST00000468810 COL5A2P05997 1499 aaPredicted RBP13.34□□□□□ -0.27
RPS27A-206ENST00000468810 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.27
RPS27A-206ENST00000468810 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
RPS27A-206ENST00000468810 SOX12O15370 315 aa13.32□□□□□ -0.28
RPS27A-206ENST00000468810 NUBP1P53384 320 aa13.32□□□□□ -0.28
RPS27A-206ENST00000468810 SLC12A5Q9H2X9 1139 aa13.32□□□□□ -0.28
RPS27A-206ENST00000468810 AXIN2Q9Y2T1 843 aa13.32□□□□□ -0.28
RPS27A-206ENST00000468810 NFAT5O94916 1531 aa13.31□□□□□ -0.28
RPS27A-206ENST00000468810 BARGINQ6ZT62 677 aa13.31□□□□□ -0.28
RPS27A-206ENST00000468810 TESK2Q96S53 571 aa13.31□□□□□ -0.28
RPS27A-206ENST00000468810 SGIP1Q9BQI5 828 aa13.31□□□□□ -0.28
RPS27A-206ENST00000468810 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
RPS27A-206ENST00000468810 WNK3Q9BYP7 1800 aa13.31□□□□□ -0.28
RPS27A-206ENST00000468810 AATKQ6ZMQ8 1374 aa13.31□□□□□ -0.28
RPS27A-206ENST00000468810 USP54Q70EL1 1684 aa13.31□□□□□ -0.28
RPS27A-206ENST00000468810 PARP4Q9UKK3 1724 aaKnown RBP13.3□□□□□ -0.28
RPS27A-206ENST00000468810 ST20-MTHFSA0A0A6YYL1 179 aa13.3□□□□□ -0.28
RPS27A-206ENST00000468810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.3□□□□□ -0.28
RPS27A-206ENST00000468810 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
RPS27A-206ENST00000468810 TMC1Q8TDI8 760 aa13.3□□□□□ -0.28
RPS27A-206ENST00000468810 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
RPS27A-206ENST00000468810 LTN1O94822 1766 aa13.3□□□□□ -0.28
RPS27A-206ENST00000468810 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
RPS27A-206ENST00000468810 ARHGEF25Q86VW2 580 aa13.29□□□□□ -0.28
RPS27A-206ENST00000468810 NME9Q86XW9 330 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms