RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.15■■□□□ 1.46
TMEM50A-202ENST00000468704 LRRC37A3O60309 1634 aa24.14■■□□□ 1.46
TMEM50A-202ENST00000468704 TMF1P82094 1093 aa24.13■■□□□ 1.45
TMEM50A-202ENST00000468704 BARGINQ6ZT62 677 aa24.13■■□□□ 1.45
TMEM50A-202ENST00000468704 CCER1Q8TC90 406 aaPredicted RBP24.13■■□□□ 1.45
TMEM50A-202ENST00000468704 USP35Q9P2H5 1018 aa24.13■■□□□ 1.45
TMEM50A-202ENST00000468704 OVOS2A0A0J9YW53 1432 aa24.12■■□□□ 1.45
TMEM50A-202ENST00000468704 OVOS2Q6IE36 1432 aa24.12■■□□□ 1.45
TMEM50A-202ENST00000468704 SOX12O15370 315 aa24.12■■□□□ 1.45
TMEM50A-202ENST00000468704 ARHGEF25Q86VW2 580 aa24.11■■□□□ 1.45
TMEM50A-202ENST00000468704 NME9Q86XW9 330 aa24.11■■□□□ 1.45
TMEM50A-202ENST00000468704 TCP11L2Q8N4U5 519 aa24.11■■□□□ 1.45
TMEM50A-202ENST00000468704 SF3B2Q13435 895 aaKnown RBP24.1■■□□□ 1.45
TMEM50A-202ENST00000468704 THRAP3Q9Y2W1 955 aaKnown RBP24.1■■□□□ 1.45
TMEM50A-202ENST00000468704 ANKRD36BQ8N2N9 1353 aa24.1■■□□□ 1.45
TMEM50A-202ENST00000468704 FAM208AQ9UK61 1670 aaKnown RBP24.1■■□□□ 1.45
TMEM50A-202ENST00000468704 ZRANB1Q9UGI0 708 aa24.08■■□□□ 1.45
TMEM50A-202ENST00000468704 SBF2Q86WG5 1849 aa24.07■■□□□ 1.44
TMEM50A-202ENST00000468704 CDCA8Q53HL2 280 aa24.07■■□□□ 1.44
TMEM50A-202ENST00000468704 WDR17Q8IZU2 1322 aa24.07■■□□□ 1.44
TMEM50A-202ENST00000468704 PEAK1Q9H792 1746 aa24.05■■□□□ 1.44
TMEM50A-202ENST00000468704 AXIN2Q9Y2T1 843 aa24.05■■□□□ 1.44
TMEM50A-202ENST00000468704 TOM1L2Q6ZVM7 507 aa24.04■■□□□ 1.44
TMEM50A-202ENST00000468704 FAM182BQ5T319 152 aa24.03■■□□□ 1.44
TMEM50A-202ENST00000468704 PDE3BQ13370 1112 aa24.01■■□□□ 1.43
TMEM50A-202ENST00000468704 DEFB132Q7Z7B7 95 aa24.01■■□□□ 1.43
TMEM50A-202ENST00000468704 DISP2A7MBM2 1401 aa24.01■■□□□ 1.43
TMEM50A-202ENST00000468704 CSB-PGBD3P0DP91 1061 aa24■■□□□ 1.43
TMEM50A-202ENST00000468704 BAG6P46379 1132 aa24■■□□□ 1.43
TMEM50A-202ENST00000468704 FAM196AQ6ZSG2 479 aa24■■□□□ 1.43
TMEM50A-202ENST00000468704 RREB1Q92766 1687 aa23.99■■□□□ 1.43
TMEM50A-202ENST00000468704 COG3Q96JB2 828 aa23.98■■□□□ 1.43
TMEM50A-202ENST00000468704 CCDC7Q96M83 1385 aa23.98■■□□□ 1.43
TMEM50A-202ENST00000468704 RGPD2P0DJD1 1756 aa23.98■■□□□ 1.43
TMEM50A-202ENST00000468704 OVOS2A0A0G2JMS6 1433 aa23.97■■□□□ 1.43
TMEM50A-202ENST00000468704 RGPD3A6NKT7 1758 aaPredicted RBP23.97■■□□□ 1.43
TMEM50A-202ENST00000468704 ERBB3P21860 1342 aa23.97■■□□□ 1.43
TMEM50A-202ENST00000468704 RGPD4Q7Z3J3 1758 aa23.97■■□□□ 1.43
TMEM50A-202ENST00000468704 CARD10Q9BWT7 1032 aa23.97■■□□□ 1.43
TMEM50A-202ENST00000468704 ANKRD26Q9UPS8 1709 aa23.97■■□□□ 1.43
TMEM50A-202ENST00000468704 CDCA7Q9BWT1 371 aaPredicted RBP23.96■■□□□ 1.43
TMEM50A-202ENST00000468704 NUP188Q5SRE5 1749 aa23.93■■□□□ 1.42
TMEM50A-202ENST00000468704 DDB1Q16531 1140 aa23.93■■□□□ 1.42
TMEM50A-202ENST00000468704 TNS2Q63HR2 1409 aa23.93■■□□□ 1.42
TMEM50A-202ENST00000468704 C11orf95C9JLR9 678 aaPredicted RBP23.92■■□□□ 1.42
TMEM50A-202ENST00000468704 TRIM37O94972 964 aa23.92■■□□□ 1.42
TMEM50A-202ENST00000468704 EIF4G2P78344 907 aaKnown RBP eCLIP23.92■■□□□ 1.42
TMEM50A-202ENST00000468704 NSD3Q9BZ95 1437 aa23.91■■□□□ 1.42
TMEM50A-202ENST00000468704 RTL1A6NKG5 1358 aa23.91■■□□□ 1.42
TMEM50A-202ENST00000468704 MAP2P11137 1827 aaKnown RBP23.89■■□□□ 1.42
TMEM50A-202ENST00000468704 KAT6BQ8WYB5 2073 aa23.89■■□□□ 1.41
TMEM50A-202ENST00000468704 ANKRD24Q8TF21 1146 aa23.89■■□□□ 1.41
TMEM50A-202ENST00000468704 PARD3Q8TEW0 1356 aa23.89■■□□□ 1.41
TMEM50A-202ENST00000468704 MAP3K19Q56UN5 1328 aa23.88■■□□□ 1.41
TMEM50A-202ENST00000468704 FYB1O15117 783 aa23.88■■□□□ 1.41
TMEM50A-202ENST00000468704 EN1Q05925 392 aaPredicted RBP23.88■■□□□ 1.41
TMEM50A-202ENST00000468704 IP6K1Q92551 441 aa23.88■■□□□ 1.41
TMEM50A-202ENST00000468704 GGNBP2Q9H3C7 697 aa23.88■■□□□ 1.41
TMEM50A-202ENST00000468704 NLRP2Q9NX02 1062 aa23.88■■□□□ 1.41
TMEM50A-202ENST00000468704 NHSQ6T4R5 1651 aa23.87■■□□□ 1.41
TMEM50A-202ENST00000468704 HSPA5P11021 654 aaKnown RBP23.87■■□□□ 1.41
TMEM50A-202ENST00000468704 BCL9O00512 1426 aa23.85■■□□□ 1.41
TMEM50A-202ENST00000468704 SHANK3Q9BYB0 1731 aa23.84■■□□□ 1.41
TMEM50A-202ENST00000468704 AMPHP49418 695 aa23.84■■□□□ 1.41
TMEM50A-202ENST00000468704 LRP5O75197 1615 aa23.84■■□□□ 1.41
TMEM50A-202ENST00000468704 APBA3O96018 575 aa23.83■■□□□ 1.41
TMEM50A-202ENST00000468704 HOXC9P31274 260 aa23.83■■□□□ 1.41
TMEM50A-202ENST00000468704 POLR3GLQ9BT43 218 aa23.82■■□□□ 1.4
TMEM50A-202ENST00000468704 CARD14Q9BXL6 1004 aa23.82■■□□□ 1.4
TMEM50A-202ENST00000468704 EXOC5O00471 708 aa23.81■■□□□ 1.4
TMEM50A-202ENST00000468704 IL2RBP14784 551 aa23.81■■□□□ 1.4
TMEM50A-202ENST00000468704 EZH2Q15910 746 aaKnown RBP23.81■■□□□ 1.4
TMEM50A-202ENST00000468704 MARCH10Q8NA82 808 aaPredicted RBP23.81■■□□□ 1.4
TMEM50A-202ENST00000468704 SMG6Q86US8 1419 aaKnown RBP23.81■■□□□ 1.4
TMEM50A-202ENST00000468704 FBLN1P23142 703 aa23.8■■□□□ 1.4
TMEM50A-202ENST00000468704 LTV1Q96GA3 475 aaPredicted RBP23.8■■□□□ 1.4
TMEM50A-202ENST00000468704 CAMKK2Q96RR4 588 aa23.8■■□□□ 1.4
TMEM50A-202ENST00000468704 CGNL1Q0VF96 1302 aa23.8■■□□□ 1.4
TMEM50A-202ENST00000468704 BTAF1O14981 1849 aa23.8■■□□□ 1.4
TMEM50A-202ENST00000468704 KIF24Q5T7B8 1368 aa23.79■■□□□ 1.4
TMEM50A-202ENST00000468704 RRS1Q15050 365 aaKnown RBP23.79■■□□□ 1.4
TMEM50A-202ENST00000468704 FLT4P35916 1363 aa23.78■■□□□ 1.4
TMEM50A-202ENST00000468704 DOT1LQ8TEK3 1739 aa23.77■■□□□ 1.4
TMEM50A-202ENST00000468704 INSRP06213 1382 aa23.75■■□□□ 1.39
TMEM50A-202ENST00000468704 BCL11BQ9C0K0 894 aaPredicted RBP23.74■■□□□ 1.39
TMEM50A-202ENST00000468704 SRCAPQ6ZRS2 3230 aa23.74■■□□□ 1.39
TMEM50A-202ENST00000468704 PSDA5PKW4 1024 aaPredicted RBP23.73■■□□□ 1.39
TMEM50A-202ENST00000468704 MEGF6O75095 1541 aa23.73■■□□□ 1.39
TMEM50A-202ENST00000468704 PKD1L3Q7Z443 1732 aa23.71■■□□□ 1.39
TMEM50A-202ENST00000468704 NSD2O96028 1365 aa23.69■■□□□ 1.38
TMEM50A-202ENST00000468704 PLSCR1O15162 318 aa23.69■■□□□ 1.38
TMEM50A-202ENST00000468704 R3HDM1Q15032 1099 aaKnown RBP23.68■■□□□ 1.38
TMEM50A-202ENST00000468704 HSP90AB2PQ58FF8 381 aa23.68■■□□□ 1.38
TMEM50A-202ENST00000468704 PTF1AQ7RTS3 328 aa23.68■■□□□ 1.38
TMEM50A-202ENST00000468704 EMILIN1Q9Y6C2 1016 aa23.68■■□□□ 1.38
TMEM50A-202ENST00000468704 PANK3Q9H999 370 aa23.67■■□□□ 1.38
TMEM50A-202ENST00000468704 NBPF6Q5VWK0 638 aa23.66■■□□□ 1.38
TMEM50A-202ENST00000468704 NBPF4Q96M43 638 aa23.66■■□□□ 1.38
TMEM50A-202ENST00000468704 NBPF14Q5TI25 921 aa23.65■■□□□ 1.38
TMEM50A-202ENST00000468704 CASZ1Q86V15 1759 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms