RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 BCL2L12Q9HB09 334 aa10.57□□□□□ -0.72
SND1-205ENST00000467238 ASXL1Q8IXJ9 1541 aa10.57□□□□□ -0.72
SND1-205ENST00000467238 MST1RQ04912 1400 aa10.57□□□□□ -0.72
SND1-205ENST00000467238 PTCH1Q13635 1447 aa10.57□□□□□ -0.72
SND1-205ENST00000467238 LCE2BO14633 110 aa10.56□□□□□ -0.72
SND1-205ENST00000467238 BRINP3Q76B58 766 aa10.56□□□□□ -0.72
SND1-205ENST00000467238 GPHNQ9NQX3 736 aaPredicted RBP10.56□□□□□ -0.72
SND1-205ENST00000467238 PRAG1Q86YV5 1406 aa10.56□□□□□ -0.72
SND1-205ENST00000467238 RPGRIP1LQ68CZ1 1315 aa10.56□□□□□ -0.72
SND1-205ENST00000467238 LRP6O75581 1613 aa10.55□□□□□ -0.72
SND1-205ENST00000467238 TBC1D12O60347 775 aa10.55□□□□□ -0.72
SND1-205ENST00000467238 POTEAQ6S8J7 498 aa10.55□□□□□ -0.72
SND1-205ENST00000467238 ZBED2Q9BTP6 218 aa10.55□□□□□ -0.72
SND1-205ENST00000467238 ZNF454Q8N9F8 522 aa10.54□□□□□ -0.72
SND1-205ENST00000467238 LAMC1P11047 1609 aa10.54□□□□□ -0.72
SND1-205ENST00000467238 SPATA31A6Q5VVP1 1343 aa10.54□□□□□ -0.72
SND1-205ENST00000467238 CCDC144AA2RUR9 1427 aa10.53□□□□□ -0.72
SND1-205ENST00000467238 SPATA31E1Q6ZUB1 1445 aa10.53□□□□□ -0.72
SND1-205ENST00000467238 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
SND1-205ENST00000467238 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
SND1-205ENST00000467238 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.72
SND1-205ENST00000467238 SETD5Q9C0A6 1442 aa10.52□□□□□ -0.73
SND1-205ENST00000467238 MRPL50Q8N5N7 158 aaKnown RBP10.52□□□□□ -0.73
SND1-205ENST00000467238 C1orf167Q5SNV9 1468 aa10.51□□□□□ -0.73
SND1-205ENST00000467238 GOLGA8CPA6NN73 597 aa10.51□□□□□ -0.73
SND1-205ENST00000467238 SLC24A1O60721 1099 aa10.51□□□□□ -0.73
SND1-205ENST00000467238 ITGBL1O95965 494 aaPredicted RBP10.51□□□□□ -0.73
SND1-205ENST00000467238 OXER1Q8TDS5 423 aa10.51□□□□□ -0.73
SND1-205ENST00000467238 MPHOSPH9Q99550 1183 aa10.51□□□□□ -0.73
SND1-205ENST00000467238 ADGRF5Q8IZF2 1346 aa10.5□□□□□ -0.73
SND1-205ENST00000467238 CDC42BPGQ6DT37 1551 aa10.49□□□□□ -0.73
SND1-205ENST00000467238 FOSBP53539 338 aa10.49□□□□□ -0.73
SND1-205ENST00000467238 ANKRD30BQ9BXX2 1392 aa10.49□□□□□ -0.73
SND1-205ENST00000467238 RGPD8O14715 1765 aaPredicted RBP10.48□□□□□ -0.73
SND1-205ENST00000467238 MEX3CQ5U5Q3 659 aaKnown RBP10.48□□□□□ -0.73
SND1-205ENST00000467238 DDX17Q92841 729 aaKnown RBP10.48□□□□□ -0.73
SND1-205ENST00000467238 ACIN1Q9UKV3 1341 aaKnown RBP10.48□□□□□ -0.73
SND1-205ENST00000467238 TECPR2O15040 1411 aa10.48□□□□□ -0.73
SND1-205ENST00000467238 PIK3C2GO75747 1445 aa10.48□□□□□ -0.73
SND1-205ENST00000467238 PTPREP23469 700 aa10.47□□□□□ -0.73
SND1-205ENST00000467238 RGL3Q3MIN7 710 aa10.47□□□□□ -0.73
SND1-205ENST00000467238 ZNF772Q68DY9 489 aaPredicted RBP10.47□□□□□ -0.73
SND1-205ENST00000467238 LRRC59Q96AG4 307 aaKnown RBP10.47□□□□□ -0.73
SND1-205ENST00000467238 PNPLA6Q8IY17 1366 aa10.47□□□□□ -0.73
SND1-205ENST00000467238 UPF1Q92900 1129 aaKnown RBP eCLIP10.46□□□□□ -0.73
SND1-205ENST00000467238 FMN2Q9NZ56 1722 aa10.46□□□□□ -0.74
SND1-205ENST00000467238 MARF1Q9Y4F3 1742 aaKnown RBP10.46□□□□□ -0.74
SND1-205ENST00000467238 EP400Q96L91 3159 aa10.46□□□□□ -0.74
SND1-205ENST00000467238 COL22A1Q8NFW1 1626 aaPredicted RBP10.45□□□□□ -0.74
SND1-205ENST00000467238 NRXN1Q9ULB1 1477 aa10.45□□□□□ -0.74
SND1-205ENST00000467238 LRPPRCP42704 1394 aaKnown RBP10.45□□□□□ -0.74
SND1-205ENST00000467238 RAB3GAP2Q9H2M9 1393 aa10.45□□□□□ -0.74
SND1-205ENST00000467238 SOS2Q07890 1332 aaPredicted RBP10.45□□□□□ -0.74
SND1-205ENST00000467238 NUTM2BA6NNL0 878 aaPredicted RBP10.45□□□□□ -0.74
SND1-205ENST00000467238 NUTM2EB1AL46 878 aaPredicted RBP10.45□□□□□ -0.74
SND1-205ENST00000467238 NUTM2AQ8IVF1 878 aaPredicted RBP10.45□□□□□ -0.74
SND1-205ENST00000467238 ORAI2Q96SN7 254 aa10.45□□□□□ -0.74
SND1-205ENST00000467238 MYOM2P54296 1465 aa10.44□□□□□ -0.74
SND1-205ENST00000467238 ABCC11Q96J66 1382 aa10.44□□□□□ -0.74
SND1-205ENST00000467238 YTHDC2Q9H6S0 1430 aaKnown RBP10.43□□□□□ -0.74
SND1-205ENST00000467238 TMEM132EQ6IEE7 984 aa10.43□□□□□ -0.74
SND1-205ENST00000467238 PLEKHH1Q9ULM0 1364 aa10.42□□□□□ -0.74
SND1-205ENST00000467238 AFF2P51816 1311 aa10.42□□□□□ -0.74
SND1-205ENST00000467238 KIF1AQ12756 1690 aa10.42□□□□□ -0.74
SND1-205ENST00000467238 WAPLQ7Z5K2 1190 aa10.42□□□□□ -0.74
SND1-205ENST00000467238 ADAM33Q9BZ11 813 aa10.42□□□□□ -0.74
SND1-205ENST00000467238 STK26Q9P289 416 aa10.42□□□□□ -0.74
SND1-205ENST00000467238 SRCAPQ6ZRS2 3230 aa10.42□□□□□ -0.74
SND1-205ENST00000467238 PXDNQ92626 1479 aa10.42□□□□□ -0.74
SND1-205ENST00000467238 CDK12Q9NYV4 1490 aaPredicted RBP10.42□□□□□ -0.74
SND1-205ENST00000467238 NBPF3Q9H094 633 aa10.41□□□□□ -0.74
SND1-205ENST00000467238 C14orf93Q9H972 538 aaKnown RBP10.41□□□□□ -0.74
SND1-205ENST00000467238 NPHP3Q7Z494 1330 aa10.4□□□□□ -0.74
SND1-205ENST00000467238 RXRBP28702 533 aa10.4□□□□□ -0.74
SND1-205ENST00000467238 ESCO1Q5FWF5 840 aa10.4□□□□□ -0.74
SND1-205ENST00000467238 C8orf37Q96NL8 207 aa10.4□□□□□ -0.74
SND1-205ENST00000467238 BCAMP50895 628 aa10.39□□□□□ -0.75
SND1-205ENST00000467238 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
SND1-205ENST00000467238 NKX1-1Q15270 411 aaPredicted RBP10.39□□□□□ -0.75
SND1-205ENST00000467238 BBXQ8WY36 941 aaPredicted RBP10.39□□□□□ -0.75
SND1-205ENST00000467238 DLC1Q96QB1 1528 aa10.38□□□□□ -0.75
SND1-205ENST00000467238 NUTM2FA1L443 756 aa10.38□□□□□ -0.75
SND1-205ENST00000467238 ADAMTS2O95450 1211 aa10.38□□□□□ -0.75
SND1-205ENST00000467238 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
SND1-205ENST00000467238 SIRT1Q96EB6 747 aa10.38□□□□□ -0.75
SND1-205ENST00000467238 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
SND1-205ENST00000467238 ADGRB1O14514 1584 aa10.38□□□□□ -0.75
SND1-205ENST00000467238 DHX57Q6P158 1386 aaKnown RBP10.38□□□□□ -0.75
SND1-205ENST00000467238 RGS12O14924 1447 aa10.37□□□□□ -0.75
SND1-205ENST00000467238 FOXO3O43524 673 aa10.37□□□□□ -0.75
SND1-205ENST00000467238 ADGRB2O60241 1585 aa10.37□□□□□ -0.75
SND1-205ENST00000467238 NGLY1Q96IV0 654 aa10.37□□□□□ -0.75
SND1-205ENST00000467238 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.37□□□□□ -0.75
SND1-205ENST00000467238 USP32Q8NFA0 1604 aa10.36□□□□□ -0.75
SND1-205ENST00000467238 HRCP23327 699 aa10.36□□□□□ -0.75
SND1-205ENST00000467238 RBM6P78332 1123 aaKnown RBP10.36□□□□□ -0.75
SND1-205ENST00000467238 XPCQ01831 940 aaPredicted RBP10.36□□□□□ -0.75
SND1-205ENST00000467238 TRAF7Q6Q0C0 670 aa10.36□□□□□ -0.75
SND1-205ENST00000467238 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
SND1-205ENST00000467238 QTRT2Q9H974 415 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms