RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 CPDO75976 1380 aa14.39□□□□□ -0.11
NUP188-204ENST00000467044 DIAPH1O60610 1272 aaKnown RBP14.39□□□□□ -0.11
NUP188-204ENST00000467044 SPATA31A6Q5VVP1 1343 aa14.39□□□□□ -0.11
NUP188-204ENST00000467044 CDK12Q9NYV4 1490 aaPredicted RBP14.38□□□□□ -0.11
NUP188-204ENST00000467044 KIF24Q5T7B8 1368 aa14.38□□□□□ -0.11
NUP188-204ENST00000467044 FAM9BQ8IZU0 186 aa14.38□□□□□ -0.11
NUP188-204ENST00000467044 NUDCQ9Y266 331 aa14.38□□□□□ -0.11
NUP188-204ENST00000467044 RTL1A6NKG5 1358 aa14.37□□□□□ -0.11
NUP188-204ENST00000467044 FAM83GA6ND36 823 aa14.37□□□□□ -0.11
NUP188-204ENST00000467044 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
NUP188-204ENST00000467044 WDR43Q15061 677 aaKnown RBP eCLIP14.37□□□□□ -0.11
NUP188-204ENST00000467044 AXIN2Q9Y2T1 843 aa14.37□□□□□ -0.11
NUP188-204ENST00000467044 RGPD5Q99666 1765 aa14.37□□□□□ -0.11
NUP188-204ENST00000467044 INSRP06213 1382 aa14.36□□□□□ -0.11
NUP188-204ENST00000467044 EIF4A2Q14240 407 aaKnown RBP14.36□□□□□ -0.11
NUP188-204ENST00000467044 MEX3CQ5U5Q3 659 aaKnown RBP14.36□□□□□ -0.11
NUP188-204ENST00000467044 PNISRQ8TF01 805 aaKnown RBP14.36□□□□□ -0.11
NUP188-204ENST00000467044 IL13P35225 146 aa14.35□□□□□ -0.11
NUP188-204ENST00000467044 EVA1CP58658 441 aa14.35□□□□□ -0.11
NUP188-204ENST00000467044 ANKRD24Q8TF21 1146 aa14.35□□□□□ -0.11
NUP188-204ENST00000467044 COL3A1P02461 1466 aaPredicted RBP14.35□□□□□ -0.11
NUP188-204ENST00000467044 COL18A1P39060 1754 aa14.34□□□□□ -0.11
NUP188-204ENST00000467044 U2AF1L5P0DN76 240 aaPredicted RBP14.34□□□□□ -0.11
NUP188-204ENST00000467044 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
NUP188-204ENST00000467044 U2AF1Q01081 240 aaKnown RBP eCLIP14.34□□□□□ -0.11
NUP188-204ENST00000467044 C8orf37Q96NL8 207 aa14.34□□□□□ -0.11
NUP188-204ENST00000467044 BLMP54132 1417 aaPredicted RBP14.33□□□□□ -0.11
NUP188-204ENST00000467044 COL14A1Q05707 1796 aaKnown RBP14.33□□□□□ -0.12
NUP188-204ENST00000467044 NGLY1Q96IV0 654 aa14.33□□□□□ -0.12
NUP188-204ENST00000467044 STRN4Q9NRL3 753 aa14.33□□□□□ -0.12
NUP188-204ENST00000467044 BTG4Q9NY30 223 aa14.33□□□□□ -0.12
NUP188-204ENST00000467044 ADAMTS8Q9UP79 889 aa14.32□□□□□ -0.12
NUP188-204ENST00000467044 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
NUP188-204ENST00000467044 ABCC6O95255 1503 aa14.31□□□□□ -0.12
NUP188-204ENST00000467044 LRP6O75581 1613 aa14.31□□□□□ -0.12
NUP188-204ENST00000467044 HMOX1P09601 288 aa14.31□□□□□ -0.12
NUP188-204ENST00000467044 EYA1Q99502 592 aa14.31□□□□□ -0.12
NUP188-204ENST00000467044 LMO7Q8WWI1 1683 aa14.3□□□□□ -0.12
NUP188-204ENST00000467044 NLRP2Q9NX02 1062 aa14.3□□□□□ -0.12
NUP188-204ENST00000467044 ERBB3P21860 1342 aa14.3□□□□□ -0.12
NUP188-204ENST00000467044 RGPD2P0DJD1 1756 aa14.29□□□□□ -0.12
NUP188-204ENST00000467044 NBPF6Q5VWK0 638 aa14.29□□□□□ -0.12
NUP188-204ENST00000467044 SULT6B1Q6IMI4 303 aa14.29□□□□□ -0.12
NUP188-204ENST00000467044 TOM1L2Q6ZVM7 507 aa14.29□□□□□ -0.12
NUP188-204ENST00000467044 USHBP1Q8N6Y0 703 aa14.29□□□□□ -0.12
NUP188-204ENST00000467044 NBPF4Q96M43 638 aa14.29□□□□□ -0.12
NUP188-204ENST00000467044 COL5A2P05997 1499 aaPredicted RBP14.28□□□□□ -0.12
NUP188-204ENST00000467044 PLCH1Q4KWH8 1693 aa14.28□□□□□ -0.12
NUP188-204ENST00000467044 WDR17Q8IZU2 1322 aa14.28□□□□□ -0.12
NUP188-204ENST00000467044 IGSF1Q8N6C5 1336 aa14.27□□□□□ -0.12
NUP188-204ENST00000467044 LARP1Q6PKG0 1096 aaKnown RBP14.27□□□□□ -0.13
NUP188-204ENST00000467044 AEBP1Q8IUX7 1158 aa14.27□□□□□ -0.13
NUP188-204ENST00000467044 CCDC146Q8IYE0 955 aa14.27□□□□□ -0.13
NUP188-204ENST00000467044 FCHSD2O94868 740 aa14.26□□□□□ -0.13
NUP188-204ENST00000467044 PNNQ9H307 717 aaKnown RBP14.26□□□□□ -0.13
NUP188-204ENST00000467044 USP21Q9UK80 565 aa14.26□□□□□ -0.13
NUP188-204ENST00000467044 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
NUP188-204ENST00000467044 RGPD1P0DJD0 1748 aa14.25□□□□□ -0.13
NUP188-204ENST00000467044 NEFMP07197 916 aa14.25□□□□□ -0.13
NUP188-204ENST00000467044 PRKAR2BP31323 418 aa14.25□□□□□ -0.13
NUP188-204ENST00000467044 UNC5CLQ8IV45 518 aa14.25□□□□□ -0.13
NUP188-204ENST00000467044 FNBP4Q8N3X1 1017 aaPredicted RBP14.25□□□□□ -0.13
NUP188-204ENST00000467044 RSPH6AQ9H0K4 717 aa14.25□□□□□ -0.13
NUP188-204ENST00000467044 USP35Q9P2H5 1018 aa14.25□□□□□ -0.13
NUP188-204ENST00000467044 FAM208AQ9UK61 1670 aaKnown RBP14.25□□□□□ -0.13
NUP188-204ENST00000467044 SLIT2O94813 1529 aa14.25□□□□□ -0.13
NUP188-204ENST00000467044 NWD2Q9ULI1 1742 aa14.24□□□□□ -0.13
NUP188-204ENST00000467044 AFF2P51816 1311 aa14.24□□□□□ -0.13
NUP188-204ENST00000467044 SENP3-EIF4A1A0A087X0R7 540 aa14.24□□□□□ -0.13
NUP188-204ENST00000467044 ILDR1Q86SU0 546 aaPredicted RBP14.24□□□□□ -0.13
NUP188-204ENST00000467044 RUNDC1Q96C34 613 aa14.24□□□□□ -0.13
NUP188-204ENST00000467044 YTHDC1Q96MU7 727 aaKnown RBP14.24□□□□□ -0.13
NUP188-204ENST00000467044 CARD10Q9BWT7 1032 aa14.24□□□□□ -0.13
NUP188-204ENST00000467044 MAPK8IP3Q9UPT6 1336 aa14.23□□□□□ -0.13
NUP188-204ENST00000467044 NRAPQ86VF7 1730 aa14.23□□□□□ -0.13
NUP188-204ENST00000467044 CRB1P82279 1406 aa14.23□□□□□ -0.13
NUP188-204ENST00000467044 RAPGEF4Q8WZA2 1011 aa14.22□□□□□ -0.13
NUP188-204ENST00000467044 BCL9LQ86UU0 1499 aa14.21□□□□□ -0.13
NUP188-204ENST00000467044 TATP17735 454 aaPredicted RBP14.21□□□□□ -0.13
NUP188-204ENST00000467044 PLEKHF1Q96S99 279 aa14.21□□□□□ -0.13
NUP188-204ENST00000467044 KDRP35968 1356 aa14.21□□□□□ -0.14
NUP188-204ENST00000467044 APAF1O14727 1248 aa14.2□□□□□ -0.14
NUP188-204ENST00000467044 HNRNPUQ00839 825 aaKnown RBP eCLIP14.2□□□□□ -0.14
NUP188-204ENST00000467044 VPS72Q15906 364 aa14.2□□□□□ -0.14
NUP188-204ENST00000467044 PHACTR3Q96KR7 559 aa14.2□□□□□ -0.14
NUP188-204ENST00000467044 SALL2Q9Y467 1007 aaPredicted RBP14.2□□□□□ -0.14
NUP188-204ENST00000467044 SPATA31A1Q5TZJ5 1347 aa14.19□□□□□ -0.14
NUP188-204ENST00000467044 SPATA31A5Q5VU36 1347 aa14.19□□□□□ -0.14
NUP188-204ENST00000467044 SPATA31A7Q8IWB4 1347 aa14.19□□□□□ -0.14
NUP188-204ENST00000467044 NEUROD2Q15784 382 aa14.19□□□□□ -0.14
NUP188-204ENST00000467044 TCP11L2Q8N4U5 519 aa14.19□□□□□ -0.14
NUP188-204ENST00000467044 NCAPD2Q15021 1401 aa14.18□□□□□ -0.14
NUP188-204ENST00000467044 IL2RBP14784 551 aa14.18□□□□□ -0.14
NUP188-204ENST00000467044 PLEKHO1Q53GL0 409 aaPredicted RBP14.18□□□□□ -0.14
NUP188-204ENST00000467044 QTRT2Q9H974 415 aaKnown RBP14.18□□□□□ -0.14
NUP188-204ENST00000467044 TRPC5Q9UL62 973 aaPredicted RBP14.18□□□□□ -0.14
NUP188-204ENST00000467044 RRP7AQ9Y3A4 280 aaKnown RBP14.18□□□□□ -0.14
NUP188-204ENST00000467044 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.18□□□□□ -0.14
NUP188-204ENST00000467044 THRAP3Q9Y2W1 955 aaKnown RBP14.17□□□□□ -0.14
NUP188-204ENST00000467044 TMPOP42166 694 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms