RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 GNAT3A8MTJ3 354 aa13.55□□□□□ -0.24
CMC1-205ENST00000466830 CLSTN1O94985 981 aa13.55□□□□□ -0.24
CMC1-205ENST00000466830 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
CMC1-205ENST00000466830 SRGAP3O43295 1099 aa13.54□□□□□ -0.24
CMC1-205ENST00000466830 DCTN1Q14203 1278 aa13.54□□□□□ -0.24
CMC1-205ENST00000466830 TRIM27P14373 513 aa13.54□□□□□ -0.24
CMC1-205ENST00000466830 SYCP2Q9BX26 1530 aa13.54□□□□□ -0.24
CMC1-205ENST00000466830 TPM3P06753 285 aa13.54□□□□□ -0.24
CMC1-205ENST00000466830 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.54□□□□□ -0.24
CMC1-205ENST00000466830 MARCH6O60337 910 aa13.54□□□□□ -0.24
CMC1-205ENST00000466830 DNAJC2Q99543 621 aaKnown RBP13.54□□□□□ -0.24
CMC1-205ENST00000466830 MCM4P33991 863 aa13.53□□□□□ -0.24
CMC1-205ENST00000466830 RNF214Q8ND24 703 aa13.53□□□□□ -0.24
CMC1-205ENST00000466830 TESK2Q96S53 571 aa13.53□□□□□ -0.24
CMC1-205ENST00000466830 ERICH2A1L162 156 aa13.53□□□□□ -0.24
CMC1-205ENST00000466830 AMOTL1Q8IY63 956 aa13.53□□□□□ -0.24
CMC1-205ENST00000466830 BRPF3Q9ULD4 1205 aa13.53□□□□□ -0.24
CMC1-205ENST00000466830 PPP6R1Q9UPN7 881 aa13.53□□□□□ -0.24
CMC1-205ENST00000466830 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.24
CMC1-205ENST00000466830 MIS18AQ9NYP9 233 aa13.52□□□□□ -0.24
CMC1-205ENST00000466830 CCDC27Q2M243 656 aa13.52□□□□□ -0.25
CMC1-205ENST00000466830 HOOK1Q9UJC3 728 aaKnown RBP13.52□□□□□ -0.25
CMC1-205ENST00000466830 SPG7Q9UQ90 795 aa13.52□□□□□ -0.25
CMC1-205ENST00000466830 BTBD11A6QL63 1104 aa13.52□□□□□ -0.25
CMC1-205ENST00000466830 FOSBP53539 338 aa13.52□□□□□ -0.25
CMC1-205ENST00000466830 CYP46A1Q9Y6A2 500 aa13.52□□□□□ -0.25
CMC1-205ENST00000466830 ANKRD36BQ8N2N9 1353 aa13.51□□□□□ -0.25
CMC1-205ENST00000466830 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
CMC1-205ENST00000466830 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
CMC1-205ENST00000466830 SAFBQ15424 915 aaKnown RBP eCLIP13.51□□□□□ -0.25
CMC1-205ENST00000466830 ASXL1Q8IXJ9 1541 aa13.51□□□□□ -0.25
CMC1-205ENST00000466830 SHANK2Q9UPX8 1470 aa13.51□□□□□ -0.25
CMC1-205ENST00000466830 TPM1P09493 284 aa13.51□□□□□ -0.25
CMC1-205ENST00000466830 KCNH5Q8NCM2 988 aa13.51□□□□□ -0.25
CMC1-205ENST00000466830 IL1RAPL2Q9NP60 686 aa13.51□□□□□ -0.25
CMC1-205ENST00000466830 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
CMC1-205ENST00000466830 IL16Q14005 1332 aa13.51□□□□□ -0.25
CMC1-205ENST00000466830 CABP4P57796 275 aa13.5□□□□□ -0.25
CMC1-205ENST00000466830 TSR1Q2NL82 804 aaKnown RBP13.5□□□□□ -0.25
CMC1-205ENST00000466830 CCDC39Q9UFE4 941 aa13.5□□□□□ -0.25
CMC1-205ENST00000466830 ARHGEF12Q9NZN5 1544 aa13.5□□□□□ -0.25
CMC1-205ENST00000466830 WDR33Q9C0J8 1336 aaKnown RBP13.5□□□□□ -0.25
CMC1-205ENST00000466830 SIL1Q9H173 461 aa13.5□□□□□ -0.25
CMC1-205ENST00000466830 FIBPO43427 364 aa13.49□□□□□ -0.25
CMC1-205ENST00000466830 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
CMC1-205ENST00000466830 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.49□□□□□ -0.25
CMC1-205ENST00000466830 ANKRD1Q15327 319 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 ZNF592Q92610 1267 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 SDF4Q9BRK5 362 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 TRAPPC8Q9Y2L5 1435 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 MAP4K4O95819 1239 aaPredicted RBP13.48□□□□□ -0.25
CMC1-205ENST00000466830 KIF6Q6ZMV9 814 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 AACSQ86V21 672 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 IGHDP01880 384 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 MYL6BP14649 208 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 TSPY26PQ9H489 355 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 TAF7Q15545 349 aaPredicted RBP13.48□□□□□ -0.25
CMC1-205ENST00000466830 PZPP20742 1482 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 AMOTL2Q9Y2J4 779 aa13.48□□□□□ -0.25
CMC1-205ENST00000466830 CCDC173Q0VFZ6 552 aa13.47□□□□□ -0.25
CMC1-205ENST00000466830 MX1P20591 662 aa13.47□□□□□ -0.25
CMC1-205ENST00000466830 AEBP1Q8IUX7 1158 aa13.47□□□□□ -0.25
CMC1-205ENST00000466830 CCDC158Q5M9N0 1113 aa13.47□□□□□ -0.25
CMC1-205ENST00000466830 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
CMC1-205ENST00000466830 TOM1L2Q6ZVM7 507 aa13.47□□□□□ -0.25
CMC1-205ENST00000466830 NAT10Q9H0A0 1025 aaKnown RBP13.47□□□□□ -0.25
CMC1-205ENST00000466830 STRN4Q9NRL3 753 aa13.47□□□□□ -0.25
CMC1-205ENST00000466830 A2MP01023 1474 aa13.47□□□□□ -0.25
CMC1-205ENST00000466830 FYB1O15117 783 aa13.46□□□□□ -0.25
CMC1-205ENST00000466830 DHX16O60231 1041 aaKnown RBP13.46□□□□□ -0.25
CMC1-205ENST00000466830 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.25
CMC1-205ENST00000466830 KIF1BPQ96EK5 621 aa13.46□□□□□ -0.25
CMC1-205ENST00000466830 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.25
CMC1-205ENST00000466830 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.25
CMC1-205ENST00000466830 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.25
CMC1-205ENST00000466830 TPM2P07951 284 aa13.46□□□□□ -0.25
CMC1-205ENST00000466830 CWC27Q6UX04 472 aaKnown RBP13.46□□□□□ -0.25
CMC1-205ENST00000466830 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.26
CMC1-205ENST00000466830 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.26
CMC1-205ENST00000466830 VPS53Q5VIR6 699 aa13.46□□□□□ -0.26
CMC1-205ENST00000466830 FBXW7Q969H0 707 aa13.46□□□□□ -0.26
CMC1-205ENST00000466830 DNMT1P26358 1616 aaKnown RBP13.45□□□□□ -0.26
CMC1-205ENST00000466830 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
CMC1-205ENST00000466830 PTPRCP08575 1304 aa13.45□□□□□ -0.26
CMC1-205ENST00000466830 SMARCA5O60264 1052 aaPredicted RBP13.45□□□□□ -0.26
CMC1-205ENST00000466830 FAM13BQ9NYF5 915 aa13.45□□□□□ -0.26
CMC1-205ENST00000466830 KINO60870 393 aaKnown RBP13.45□□□□□ -0.26
CMC1-205ENST00000466830 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
CMC1-205ENST00000466830 CCDC47Q96A33 483 aaKnown RBP13.45□□□□□ -0.26
CMC1-205ENST00000466830 PUS7Q96PZ0 661 aaKnown RBP13.45□□□□□ -0.26
CMC1-205ENST00000466830 TBC1D2Q9BYX2 928 aa13.45□□□□□ -0.26
CMC1-205ENST00000466830 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
CMC1-205ENST00000466830 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
CMC1-205ENST00000466830 BLOC1S2Q6QNY1 142 aa13.45□□□□□ -0.26
CMC1-205ENST00000466830 GOLGA6L1Q8N7Z2 621 aa13.45□□□□□ -0.26
CMC1-205ENST00000466830 EIF2AK4Q9P2K8 1649 aaKnown RBP13.44□□□□□ -0.26
CMC1-205ENST00000466830 NUTM1Q86Y26 1132 aa13.44□□□□□ -0.26
CMC1-205ENST00000466830 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
CMC1-205ENST00000466830 PRDM11Q9NQV5 511 aa13.44□□□□□ -0.26
CMC1-205ENST00000466830 F6X3S4 739 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 816 ms