RNA–Protein interactions for RNA: ENST00000466477.5

LCLAT1-206, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-206ENST00000466477 PSDA5PKW4 1024 aaPredicted RBP21.13■□□□□ 0.97
LCLAT1-206ENST00000466477 KCNH5Q8NCM2 988 aa21.13■□□□□ 0.97
LCLAT1-206ENST00000466477 RGPD1P0DJD0 1748 aa21.12■□□□□ 0.97
LCLAT1-206ENST00000466477 TNS1Q9HBL0 1735 aaKnown RBP21.12■□□□□ 0.97
LCLAT1-206ENST00000466477 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
LCLAT1-206ENST00000466477 WDR17Q8IZU2 1322 aa21.11■□□□□ 0.97
LCLAT1-206ENST00000466477 TERF2IPQ9NYB0 399 aa21.11■□□□□ 0.97
LCLAT1-206ENST00000466477 LRRC37A3O60309 1634 aa21.1■□□□□ 0.97
LCLAT1-206ENST00000466477 EZH2Q15910 746 aaKnown RBP21.09■□□□□ 0.97
LCLAT1-206ENST00000466477 RGPD5Q99666 1765 aa21.09■□□□□ 0.97
LCLAT1-206ENST00000466477 USP31Q70CQ4 1352 aa21.09■□□□□ 0.97
LCLAT1-206ENST00000466477 FAM196AQ6ZSG2 479 aa21.08■□□□□ 0.97
LCLAT1-206ENST00000466477 OVOS2A0A0J9YW53 1432 aa21.07■□□□□ 0.96
LCLAT1-206ENST00000466477 OVOS2Q6IE36 1432 aa21.07■□□□□ 0.96
LCLAT1-206ENST00000466477 FBLN1P23142 703 aa21.07■□□□□ 0.96
LCLAT1-206ENST00000466477 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
LCLAT1-206ENST00000466477 THRAP3Q9Y2W1 955 aaKnown RBP21.07■□□□□ 0.96
LCLAT1-206ENST00000466477 PARP4Q9UKK3 1724 aaKnown RBP21.07■□□□□ 0.96
LCLAT1-206ENST00000466477 APBA3O96018 575 aa21.06■□□□□ 0.96
LCLAT1-206ENST00000466477 TMF1P82094 1093 aa21.06■□□□□ 0.96
LCLAT1-206ENST00000466477 DDB1Q16531 1140 aa21.05■□□□□ 0.96
LCLAT1-206ENST00000466477 LTV1Q96GA3 475 aaPredicted RBP21.04■□□□□ 0.96
LCLAT1-206ENST00000466477 POLR3GLQ9BT43 218 aa21.04■□□□□ 0.96
LCLAT1-206ENST00000466477 USP54Q70EL1 1684 aa21.04■□□□□ 0.96
LCLAT1-206ENST00000466477 WNK3Q9BYP7 1800 aa21.04■□□□□ 0.96
LCLAT1-206ENST00000466477 LTN1O94822 1766 aa21.03■□□□□ 0.96
LCLAT1-206ENST00000466477 NLRP2Q9NX02 1062 aa21.03■□□□□ 0.96
LCLAT1-206ENST00000466477 R3HDM1Q15032 1099 aaKnown RBP21.02■□□□□ 0.96
LCLAT1-206ENST00000466477 PTF1AQ7RTS3 328 aa21.02■□□□□ 0.96
LCLAT1-206ENST00000466477 ANKRD24Q8TF21 1146 aa21.02■□□□□ 0.96
LCLAT1-206ENST00000466477 OVOS2A0A0G2JMS6 1433 aa21.02■□□□□ 0.96
LCLAT1-206ENST00000466477 ANKRD36BQ8N2N9 1353 aa21.01■□□□□ 0.95
LCLAT1-206ENST00000466477 NINLQ9Y2I6 1382 aa21.01■□□□□ 0.95
LCLAT1-206ENST00000466477 CARD10Q9BWT7 1032 aa21.01■□□□□ 0.95
LCLAT1-206ENST00000466477 GGNBP2Q9H3C7 697 aa21.01■□□□□ 0.95
LCLAT1-206ENST00000466477 ERBB3P21860 1342 aa21.01■□□□□ 0.95
LCLAT1-206ENST00000466477 MARCH10Q8NA82 808 aaPredicted RBP21■□□□□ 0.95
LCLAT1-206ENST00000466477 COG3Q96JB2 828 aa21■□□□□ 0.95
LCLAT1-206ENST00000466477 PUS7Q96PZ0 661 aaKnown RBP21■□□□□ 0.95
LCLAT1-206ENST00000466477 DISP2A7MBM2 1401 aa21■□□□□ 0.95
LCLAT1-206ENST00000466477 CAMKK2Q96RR4 588 aa20.99■□□□□ 0.95
LCLAT1-206ENST00000466477 PEAK1Q9H792 1746 aa20.98■□□□□ 0.95
LCLAT1-206ENST00000466477 ABCC6O95255 1503 aa20.98■□□□□ 0.95
LCLAT1-206ENST00000466477 CCDC7Q96M83 1385 aa20.97■□□□□ 0.95
LCLAT1-206ENST00000466477 RRS1Q15050 365 aaKnown RBP20.96■□□□□ 0.95
LCLAT1-206ENST00000466477 MAP3K19Q56UN5 1328 aa20.96■□□□□ 0.95
LCLAT1-206ENST00000466477 CLSPNQ9HAW4 1339 aa20.96■□□□□ 0.95
LCLAT1-206ENST00000466477 MYOM1P52179 1685 aa20.95■□□□□ 0.94
LCLAT1-206ENST00000466477 TNS2Q63HR2 1409 aa20.95■□□□□ 0.94
LCLAT1-206ENST00000466477 NSD3Q9BZ95 1437 aa20.94■□□□□ 0.94
LCLAT1-206ENST00000466477 AMPHP49418 695 aa20.93■□□□□ 0.94
LCLAT1-206ENST00000466477 ACSBG1Q96GR2 724 aa20.93■□□□□ 0.94
LCLAT1-206ENST00000466477 EXOC5O00471 708 aa20.92■□□□□ 0.94
LCLAT1-206ENST00000466477 FYB1O15117 783 aa20.92■□□□□ 0.94
LCLAT1-206ENST00000466477 CDCA7Q9BWT1 371 aaPredicted RBP20.92■□□□□ 0.94
LCLAT1-206ENST00000466477 TIMELESSQ9UNS1 1208 aa20.92■□□□□ 0.94
LCLAT1-206ENST00000466477 NUP188Q5SRE5 1749 aa20.92■□□□□ 0.94
LCLAT1-206ENST00000466477 SLC24A1O60721 1099 aa20.91■□□□□ 0.94
LCLAT1-206ENST00000466477 HOXC9P31274 260 aa20.91■□□□□ 0.94
LCLAT1-206ENST00000466477 IP6K1Q92551 441 aa20.91■□□□□ 0.94
LCLAT1-206ENST00000466477 RREB1Q92766 1687 aa20.91■□□□□ 0.94
LCLAT1-206ENST00000466477 IL2RBP14784 551 aa20.9■□□□□ 0.94
LCLAT1-206ENST00000466477 CDCA8Q53HL2 280 aa20.9■□□□□ 0.94
LCLAT1-206ENST00000466477 USHBP1Q8N6Y0 703 aa20.9■□□□□ 0.94
LCLAT1-206ENST00000466477 CARD14Q9BXL6 1004 aa20.9■□□□□ 0.94
LCLAT1-206ENST00000466477 KCNQ2O43526 872 aa20.89■□□□□ 0.93
LCLAT1-206ENST00000466477 HSPA5P11021 654 aaKnown RBP20.89■□□□□ 0.93
LCLAT1-206ENST00000466477 KIF20BQ96Q89 1820 aa20.88■□□□□ 0.93
LCLAT1-206ENST00000466477 PARD3Q8TEW0 1356 aa20.87■□□□□ 0.93
LCLAT1-206ENST00000466477 BCL11BQ9C0K0 894 aaPredicted RBP20.86■□□□□ 0.93
LCLAT1-206ENST00000466477 SBF2Q86WG5 1849 aa20.85■□□□□ 0.93
LCLAT1-206ENST00000466477 DDX54Q8TDD1 881 aaKnown RBP20.85■□□□□ 0.93
LCLAT1-206ENST00000466477 ANO8Q9HCE9 1232 aaPredicted RBP20.85■□□□□ 0.93
LCLAT1-206ENST00000466477 EIF4G2P78344 907 aaKnown RBP eCLIP20.84■□□□□ 0.932e-9■■■■■ 39.4
LCLAT1-206ENST00000466477 MEGF6O75095 1541 aa20.83■□□□□ 0.93
LCLAT1-206ENST00000466477 LRP5O75197 1615 aa20.83■□□□□ 0.93
LCLAT1-206ENST00000466477 EMILIN1Q9Y6C2 1016 aa20.83■□□□□ 0.93
LCLAT1-206ENST00000466477 RGPD2P0DJD1 1756 aa20.82■□□□□ 0.92
LCLAT1-206ENST00000466477 PPM1GO15355 546 aaPredicted RBP20.82■□□□□ 0.92
LCLAT1-206ENST00000466477 HSP90AB2PQ58FF8 381 aa20.82■□□□□ 0.92
LCLAT1-206ENST00000466477 NBPF14Q5TI25 921 aa20.82■□□□□ 0.92
LCLAT1-206ENST00000466477 FAM208AQ9UK61 1670 aaKnown RBP20.82■□□□□ 0.92
LCLAT1-206ENST00000466477 RTL1A6NKG5 1358 aa20.82■□□□□ 0.92
LCLAT1-206ENST00000466477 C11orf95C9JLR9 678 aaPredicted RBP20.81■□□□□ 0.92
LCLAT1-206ENST00000466477 TNNT2P45379 298 aaPredicted RBP20.81■□□□□ 0.92
LCLAT1-206ENST00000466477 NBPF6Q5VWK0 638 aa20.8■□□□□ 0.92
LCLAT1-206ENST00000466477 NBPF4Q96M43 638 aa20.8■□□□□ 0.92
LCLAT1-206ENST00000466477 NHSQ6T4R5 1651 aa20.8■□□□□ 0.92
LCLAT1-206ENST00000466477 BCL9O00512 1426 aa20.79■□□□□ 0.92
LCLAT1-206ENST00000466477 SMG6Q86US8 1419 aaKnown RBP20.79■□□□□ 0.92
LCLAT1-206ENST00000466477 PROM2Q8N271 834 aa20.79■□□□□ 0.92
LCLAT1-206ENST00000466477 TXNRD1Q16881 649 aa20.78■□□□□ 0.92
LCLAT1-206ENST00000466477 SYTL4Q96C24 671 aaPredicted RBP20.78■□□□□ 0.92
LCLAT1-206ENST00000466477 PDGFDQ9GZP0 370 aaPredicted RBP20.78■□□□□ 0.92
LCLAT1-206ENST00000466477 FLT4P35916 1363 aa20.77■□□□□ 0.92
LCLAT1-206ENST00000466477 PLSCR1O15162 318 aa20.77■□□□□ 0.92
LCLAT1-206ENST00000466477 CGNL1Q0VF96 1302 aa20.75■□□□□ 0.91
LCLAT1-206ENST00000466477 RGPD3A6NKT7 1758 aaPredicted RBP20.74■□□□□ 0.91
LCLAT1-206ENST00000466477 RGPD4Q7Z3J3 1758 aa20.74■□□□□ 0.91
LCLAT1-206ENST00000466477 INSRP06213 1382 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms