RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 LNPKQ9C0E8 428 aa24.42■■□□□ 1.5
LIMS2-212ENST00000466410 ELL2O00472 640 aaPredicted RBP24.42■■□□□ 1.5
LIMS2-212ENST00000466410 NUDT16Q96DE0 195 aaKnown RBP24.41■■□□□ 1.5
LIMS2-212ENST00000466410 CALD1Q05682 793 aaKnown RBP24.41■■□□□ 1.5
LIMS2-212ENST00000466410 SPRYD3Q8NCJ5 442 aa24.41■■□□□ 1.5
LIMS2-212ENST00000466410 IFT57Q9NWB7 429 aa24.41■■□□□ 1.5
LIMS2-212ENST00000466410 CDK12Q9NYV4 1490 aaPredicted RBP24.41■■□□□ 1.5
LIMS2-212ENST00000466410 ZBTB7BO15156 539 aaPredicted RBP24.4■■□□□ 1.5
LIMS2-212ENST00000466410 GNAI1P63096 354 aa24.4■■□□□ 1.5
LIMS2-212ENST00000466410 MBIPQ9NS73 344 aa24.4■■□□□ 1.5
LIMS2-212ENST00000466410 RRS1Q15050 365 aaKnown RBP24.4■■□□□ 1.5
LIMS2-212ENST00000466410 ZNF853P0CG23 659 aa24.39■■□□□ 1.5
LIMS2-212ENST00000466410 CHD1LQ86WJ1 897 aa24.39■■□□□ 1.49
LIMS2-212ENST00000466410 AATKQ6ZMQ8 1374 aa24.38■■□□□ 1.49
LIMS2-212ENST00000466410 CPS1P31327 1500 aa24.38■■□□□ 1.49
LIMS2-212ENST00000466410 COG3Q96JB2 828 aa24.38■■□□□ 1.49
LIMS2-212ENST00000466410 C1orf115Q9H7X2 142 aa24.38■■□□□ 1.49
LIMS2-212ENST00000466410 ARHGAP45Q92619 1136 aa24.37■■□□□ 1.49
LIMS2-212ENST00000466410 PTCH1Q13635 1447 aa24.37■■□□□ 1.49
LIMS2-212ENST00000466410 CCDC61Q9Y6R9 512 aa24.37■■□□□ 1.49
LIMS2-212ENST00000466410 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.36■■□□□ 1.49
LIMS2-212ENST00000466410 DLG5Q8TDM6 1919 aa24.35■■□□□ 1.49
LIMS2-212ENST00000466410 PIK3R4Q99570 1358 aa24.35■■□□□ 1.49
LIMS2-212ENST00000466410 FAM83GA6ND36 823 aa24.35■■□□□ 1.49
LIMS2-212ENST00000466410 TWISTNBQ3B726 338 aaPredicted RBP24.34■■□□□ 1.49
LIMS2-212ENST00000466410 C8orf58Q8NAV2 365 aa24.34■■□□□ 1.49
LIMS2-212ENST00000466410 ESF1Q9H501 851 aaKnown RBP24.34■■□□□ 1.49
LIMS2-212ENST00000466410 ANKRD45Q5TZF3 282 aa24.33■■□□□ 1.49
LIMS2-212ENST00000466410 CFAP44Q96MT7 982 aa24.33■■□□□ 1.49
LIMS2-212ENST00000466410 MON2Q7Z3U7 1717 aa24.33■■□□□ 1.48
LIMS2-212ENST00000466410 DCTN1Q14203 1278 aa24.32■■□□□ 1.48
LIMS2-212ENST00000466410 ABCC4O15439 1325 aa24.32■■□□□ 1.48
LIMS2-212ENST00000466410 SIRT2Q8IXJ6 389 aa24.31■■□□□ 1.48
LIMS2-212ENST00000466410 PRR36Q9H6K5 1346 aa24.31■■□□□ 1.48
LIMS2-212ENST00000466410 LMOD3Q0VAK6 560 aa24.31■■□□□ 1.48
LIMS2-212ENST00000466410 GCC1Q96CN9 775 aa24.3■■□□□ 1.48
LIMS2-212ENST00000466410 CHMP4BQ9H444 224 aaKnown RBP24.3■■□□□ 1.48
LIMS2-212ENST00000466410 BMP2KLQ5H9B9 411 aa24.29■■□□□ 1.48
LIMS2-212ENST00000466410 SIRT1Q96EB6 747 aa24.29■■□□□ 1.48
LIMS2-212ENST00000466410 TECPR2O15040 1411 aa24.29■■□□□ 1.48
LIMS2-212ENST00000466410 RBM25P49756 843 aaKnown RBP24.28■■□□□ 1.48
LIMS2-212ENST00000466410 C3P01024 1663 aa24.28■■□□□ 1.48
LIMS2-212ENST00000466410 KNDC1Q76NI1 1749 aa24.28■■□□□ 1.48
LIMS2-212ENST00000466410 AKAP12Q02952 1782 aa24.27■■□□□ 1.48
LIMS2-212ENST00000466410 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
LIMS2-212ENST00000466410 CHMP5Q9NZZ3 219 aa24.27■■□□□ 1.48
LIMS2-212ENST00000466410 AEBP1Q8IUX7 1158 aa24.26■■□□□ 1.47
LIMS2-212ENST00000466410 HSCBQ8IWL3 235 aa24.26■■□□□ 1.47
LIMS2-212ENST00000466410 ITSN1Q15811 1721 aa24.26■■□□□ 1.47
LIMS2-212ENST00000466410 TNRQ92752 1358 aa24.25■■□□□ 1.47
LIMS2-212ENST00000466410 API5Q9BZZ5 524 aaKnown RBP24.25■■□□□ 1.47
LIMS2-212ENST00000466410 MCM4P33991 863 aa24.24■■□□□ 1.47
LIMS2-212ENST00000466410 ROBO2Q9HCK4 1378 aa24.24■■□□□ 1.47
LIMS2-212ENST00000466410 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
LIMS2-212ENST00000466410 EIF4A2Q14240 407 aaKnown RBP24.23■■□□□ 1.47
LIMS2-212ENST00000466410 SULT6B1Q6IMI4 303 aa24.23■■□□□ 1.47
LIMS2-212ENST00000466410 KRT24Q2M2I5 525 aa24.21■■□□□ 1.47
LIMS2-212ENST00000466410 UBR1Q8IWV7 1749 aa24.21■■□□□ 1.47
LIMS2-212ENST00000466410 TTC21BQ7Z4L5 1316 aa24.2■■□□□ 1.47
LIMS2-212ENST00000466410 NUTM2FA1L443 756 aa24.2■■□□□ 1.47
LIMS2-212ENST00000466410 CEBPAP49715 358 aaPredicted RBP24.2■■□□□ 1.46
LIMS2-212ENST00000466410 TBC1D9Q6ZT07 1266 aa24.19■■□□□ 1.46
LIMS2-212ENST00000466410 SNX21Q969T3 373 aa24.19■■□□□ 1.46
LIMS2-212ENST00000466410 TMEM2Q9UHN6 1383 aa24.19■■□□□ 1.46
LIMS2-212ENST00000466410 NRKQ7Z2Y5 1582 aa24.19■■□□□ 1.46
LIMS2-212ENST00000466410 KIF2CQ99661 725 aa24.19■■□□□ 1.46
LIMS2-212ENST00000466410 ACEP12821 1306 aa24.19■■□□□ 1.46
LIMS2-212ENST00000466410 NCOA3Q9Y6Q9 1424 aa24.18■■□□□ 1.46
LIMS2-212ENST00000466410 MCM10Q7L590 875 aa24.17■■□□□ 1.46
LIMS2-212ENST00000466410 DDIT3P35638 169 aa24.16■■□□□ 1.46
LIMS2-212ENST00000466410 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
LIMS2-212ENST00000466410 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.15■■□□□ 1.46
LIMS2-212ENST00000466410 HSP90AB2PQ58FF8 381 aa24.15■■□□□ 1.46
LIMS2-212ENST00000466410 CHL1O00533 1208 aa24.15■■□□□ 1.46
LIMS2-212ENST00000466410 INTS3Q68E01 1043 aaKnown RBP24.15■■□□□ 1.46
LIMS2-212ENST00000466410 KIF24Q5T7B8 1368 aa24.15■■□□□ 1.46
LIMS2-212ENST00000466410 OVOS2A0A0J9YW53 1432 aa24.14■■□□□ 1.46
LIMS2-212ENST00000466410 OVOS2Q6IE36 1432 aa24.14■■□□□ 1.46
LIMS2-212ENST00000466410 GZF1Q9H116 711 aaPredicted RBP24.13■■□□□ 1.45
LIMS2-212ENST00000466410 DCTPP1Q9H773 170 aa24.13■■□□□ 1.45
LIMS2-212ENST00000466410 SOX12O15370 315 aa24.12■■□□□ 1.45
LIMS2-212ENST00000466410 GSPT1P15170 499 aaKnown RBP24.12■■□□□ 1.45
LIMS2-212ENST00000466410 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
LIMS2-212ENST00000466410 RGS12O14924 1447 aa24.12■■□□□ 1.45
LIMS2-212ENST00000466410 PLEKHG3A1L390 1219 aa24.12■■□□□ 1.45
LIMS2-212ENST00000466410 CD2BP2O95400 341 aaKnown RBP24.12■■□□□ 1.45
LIMS2-212ENST00000466410 PLEKHM2Q8IWE5 1019 aa24.12■■□□□ 1.45
LIMS2-212ENST00000466410 PEAK1Q9H792 1746 aa24.11■■□□□ 1.45
LIMS2-212ENST00000466410 TRAK2O60296 914 aa24.11■■□□□ 1.45
LIMS2-212ENST00000466410 HSP90AB1P08238 724 aaKnown RBP24.11■■□□□ 1.45
LIMS2-212ENST00000466410 LTKP29376 864 aa24.11■■□□□ 1.45
LIMS2-212ENST00000466410 L1TD1Q5T7N2 865 aaKnown RBP24.11■■□□□ 1.45
LIMS2-212ENST00000466410 USP6P35125 1406 aa24.11■■□□□ 1.45
LIMS2-212ENST00000466410 CDC45O75419 566 aa24.1■■□□□ 1.45
LIMS2-212ENST00000466410 ARXQ96QS3 562 aa24.1■■□□□ 1.45
LIMS2-212ENST00000466410 RBM42Q9BTD8 480 aaKnown RBP24.1■■□□□ 1.45
LIMS2-212ENST00000466410 TOPAZ1Q8N9V7 1692 aa24.1■■□□□ 1.45
LIMS2-212ENST00000466410 C16orf71Q8IYS4 520 aaPredicted RBP24.09■■□□□ 1.45
LIMS2-212ENST00000466410 ATP10DQ9P241 1426 aa24.09■■□□□ 1.45
LIMS2-212ENST00000466410 ANKRD44Q8N8A2 993 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms