RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 ZFP42Q96MM3 310 aa12.79□□□□□ -0.36
SSB-207ENST00000465871 GJD4Q96KN9 370 aaPredicted RBP12.78□□□□□ -0.36
SSB-207ENST00000465871 EMILIN1Q9Y6C2 1016 aa12.78□□□□□ -0.36
SSB-207ENST00000465871 SCARF1Q14162 830 aa12.77□□□□□ -0.37
SSB-207ENST00000465871 BANK1Q8NDB2 785 aa12.77□□□□□ -0.37
SSB-207ENST00000465871 KCTD15Q96SI1 283 aaPredicted RBP12.77□□□□□ -0.37
SSB-207ENST00000465871 PRKCSHP14314 528 aaPredicted RBP12.76□□□□□ -0.37
SSB-207ENST00000465871 TREML4Q6UXN2 200 aa12.76□□□□□ -0.37
SSB-207ENST00000465871 PURBQ96QR8 312 aaKnown RBP12.76□□□□□ -0.37
SSB-207ENST00000465871 SOCS7O14512 581 aa12.75□□□□□ -0.37
SSB-207ENST00000465871 MEIOBQ8N635 442 aa12.75□□□□□ -0.37
SSB-207ENST00000465871 NBPF20Q3BBV1 942 aa12.74□□□□□ -0.37
SSB-207ENST00000465871 LCE2AQ5TA79 106 aaPredicted RBP12.73□□□□□ -0.37
SSB-207ENST00000465871 PPP1R26Q5T8A7 1209 aaPredicted RBP12.72□□□□□ -0.37
SSB-207ENST00000465871 LINC00528Q8N1L1 170 aa12.72□□□□□ -0.37
SSB-207ENST00000465871 PGPEP1Q9NXJ5 209 aa12.72□□□□□ -0.37
SSB-207ENST00000465871 DHX9Q08211 1270 aaKnown RBP12.71□□□□□ -0.37
SSB-207ENST00000465871 NFX1Q12986 1120 aaKnown RBP12.71□□□□□ -0.37
SSB-207ENST00000465871 INTS6LQ5JSJ4 861 aaKnown RBP12.71□□□□□ -0.37
SSB-207ENST00000465871 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
SSB-207ENST00000465871 ZBBXA8MT70 800 aa12.7□□□□□ -0.38
SSB-207ENST00000465871 WFS1O76024 890 aa12.7□□□□□ -0.38
SSB-207ENST00000465871 UPP2O95045 317 aa12.7□□□□□ -0.38
SSB-207ENST00000465871 MTMR14Q8NCE2 650 aa12.7□□□□□ -0.38
SSB-207ENST00000465871 TERTO14746 1132 aaKnown RBP12.69□□□□□ -0.38
SSB-207ENST00000465871 C6orf118Q5T5N4 469 aa12.69□□□□□ -0.38
SSB-207ENST00000465871 APBB1O00213 710 aa12.68□□□□□ -0.38
SSB-207ENST00000465871 BMP2P12643 396 aa12.67□□□□□ -0.38
SSB-207ENST00000465871 FBXO45P0C2W1 286 aa12.66□□□□□ -0.38
SSB-207ENST00000465871 Q6ZVU0 165 aa12.66□□□□□ -0.38
SSB-207ENST00000465871 TSEN34Q9BSV6 310 aaKnown RBP12.66□□□□□ -0.38
SSB-207ENST00000465871 NDUFB9Q9Y6M9 179 aa12.66□□□□□ -0.38
SSB-207ENST00000465871 SNRKQ9NRH2 765 aa12.65□□□□□ -0.38
SSB-207ENST00000465871 NXF1Q9UBU9 619 aaKnown RBP12.65□□□□□ -0.38
SSB-207ENST00000465871 ESPNB1AK53 854 aa12.64□□□□□ -0.39
SSB-207ENST00000465871 GPR37L1O60883 481 aa12.64□□□□□ -0.39
SSB-207ENST00000465871 CBLBQ13191 982 aa12.64□□□□□ -0.39
SSB-207ENST00000465871 RAB15P59190 212 aa12.62□□□□□ -0.39
SSB-207ENST00000465871 NPAS3Q8IXF0 933 aa12.62□□□□□ -0.39
SSB-207ENST00000465871 PCDHB9Q9Y5E1 797 aa12.62□□□□□ -0.39
SSB-207ENST00000465871 SOBPA7XYQ1 873 aa12.61□□□□□ -0.39
SSB-207ENST00000465871 MAN1A2O60476 641 aa12.61□□□□□ -0.39
SSB-207ENST00000465871 SEPT12Q8IYM1 358 aa12.61□□□□□ -0.39
SSB-207ENST00000465871 SOS2Q07890 1332 aaPredicted RBP12.61□□□□□ -0.39
SSB-207ENST00000465871 NR1H3Q13133 447 aa12.6□□□□□ -0.39
SSB-207ENST00000465871 TMPRSS4Q9NRS4 437 aa12.6□□□□□ -0.39
SSB-207ENST00000465871 ERVH48-1M5A8F1 160 aa12.59□□□□□ -0.39
SSB-207ENST00000465871 LCE2CQ5TA81 110 aa12.59□□□□□ -0.39
SSB-207ENST00000465871 ZNF784Q8NCA9 323 aaPredicted RBP12.59□□□□□ -0.39
SSB-207ENST00000465871 SLC16A10Q8TF71 515 aa12.59□□□□□ -0.39
SSB-207ENST00000465871 SPINT1O43278 529 aa12.57□□□□□ -0.4
SSB-207ENST00000465871 ZNF592Q92610 1267 aa12.57□□□□□ -0.4
SSB-207ENST00000465871 DNMT3LQ9UJW3 386 aa12.57□□□□□ -0.4
SSB-207ENST00000465871 H3BM21 787 aa12.56□□□□□ -0.4
SSB-207ENST00000465871 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
SSB-207ENST00000465871 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
SSB-207ENST00000465871 TTLL8A6PVC2 850 aa12.55□□□□□ -0.4
SSB-207ENST00000465871 WIPF1O43516 503 aa12.55□□□□□ -0.4
SSB-207ENST00000465871 LILRA1O75019 489 aa12.55□□□□□ -0.4
SSB-207ENST00000465871 VEGFBP49765 207 aa12.55□□□□□ -0.4
SSB-207ENST00000465871 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
SSB-207ENST00000465871 TRIM52Q96A61 297 aa12.54□□□□□ -0.4
SSB-207ENST00000465871 AGBL1Q96MI9 1066 aa12.54□□□□□ -0.4
SSB-207ENST00000465871 ADH1AP07327 375 aa12.53□□□□□ -0.4
SSB-207ENST00000465871 RELBQ01201 579 aa12.53□□□□□ -0.4
SSB-207ENST00000465871 CCDC125Q86Z20 511 aa12.53□□□□□ -0.4
SSB-207ENST00000465871 PRM3Q9NNZ6 103 aa12.53□□□□□ -0.4
SSB-207ENST00000465871 TBC1D2BQ9UPU7 963 aa12.53□□□□□ -0.4
SSB-207ENST00000465871 IRF7Q92985 503 aa12.52□□□□□ -0.41
SSB-207ENST00000465871 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.51□□□□□ -0.411e-6■□□□□ 10.6
SSB-207ENST00000465871 CYLDQ9NQC7 956 aa12.51□□□□□ -0.41
SSB-207ENST00000465871 ADD1P35611 737 aaKnown RBP12.5□□□□□ -0.41
SSB-207ENST00000465871 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
SSB-207ENST00000465871 INSM2Q96T92 566 aaPredicted RBP12.48□□□□□ -0.41
SSB-207ENST00000465871 ERBB4Q15303 1308 aa12.47□□□□□ -0.41
SSB-207ENST00000465871 CTSOP43234 321 aaPredicted RBP12.47□□□□□ -0.41
SSB-207ENST00000465871 KDF1Q8NAX2 398 aaPredicted RBP12.47□□□□□ -0.41
SSB-207ENST00000465871 ZNF395Q9H8N7 513 aaPredicted RBP12.47□□□□□ -0.41
SSB-207ENST00000465871 FIGNL2A6NMB9 653 aa12.46□□□□□ -0.41
SSB-207ENST00000465871 PTGIRP43119 386 aa12.46□□□□□ -0.41
SSB-207ENST00000465871 POLMQ9NP87 494 aaPredicted RBP12.46□□□□□ -0.41
SSB-207ENST00000465871 PPFIA3O75145 1194 aa12.45□□□□□ -0.42
SSB-207ENST00000465871 VSIG8P0DPA2 414 aa12.45□□□□□ -0.42
SSB-207ENST00000465871 ERVK-9P63128 1117 aa12.45□□□□□ -0.42
SSB-207ENST00000465871 INSM1Q01101 510 aaPredicted RBP12.45□□□□□ -0.42
SSB-207ENST00000465871 IRF5Q13568 498 aa12.45□□□□□ -0.42
SSB-207ENST00000465871 MCM6Q14566 821 aa12.45□□□□□ -0.42
SSB-207ENST00000465871 GMPRP36959 345 aa12.44□□□□□ -0.42
SSB-207ENST00000465871 CC2D2BQ6DHV5 1058 aa12.44□□□□□ -0.42
SSB-207ENST00000465871 RNF217Q8TC41 542 aa12.44□□□□□ -0.42
SSB-207ENST00000465871 PTSQ03393 145 aa12.43□□□□□ -0.42
SSB-207ENST00000465871 ATP5J2-PTCD1G3V325 749 aa12.42□□□□□ -0.42
SSB-207ENST00000465871 GDPD2Q9HCC8 539 aa12.42□□□□□ -0.42
SSB-207ENST00000465871 PCDHB11Q9Y5F2 797 aa12.42□□□□□ -0.42
SSB-207ENST00000465871 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
SSB-207ENST00000465871 FOXD4L5Q5VV16 416 aaPredicted RBP12.41□□□□□ -0.42
SSB-207ENST00000465871 CEP126Q9P2H0 1117 aa12.4□□□□□ -0.42
SSB-207ENST00000465871 SCTRP47872 440 aa12.39□□□□□ -0.43
SSB-207ENST00000465871 ABL2P42684 1182 aa12.38□□□□□ -0.43
SSB-207ENST00000465871 CYP2U1Q7Z449 544 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 197.6 ms