RNA–Protein interactions for RNA: ENST00000465864.1

KDM1A-203, Transcript of lysine demethylase 1A, humanhuman

TSL 5

Gene KDM1A, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-203ENST00000465864 PEAK1Q9H792 1746 aa11.42□□□□□ -0.58
KDM1A-203ENST00000465864 BRWD3Q6RI45 1802 aa11.42□□□□□ -0.58
KDM1A-203ENST00000465864 LARP1Q6PKG0 1096 aaKnown RBP11.41□□□□□ -0.58
KDM1A-203ENST00000465864 KCNH5Q8NCM2 988 aa11.41□□□□□ -0.58
KDM1A-203ENST00000465864 GJD4Q96KN9 370 aaPredicted RBP11.41□□□□□ -0.58
KDM1A-203ENST00000465864 STRN4Q9NRL3 753 aa11.41□□□□□ -0.58
KDM1A-203ENST00000465864 TRPC5Q9UL62 973 aaPredicted RBP11.41□□□□□ -0.58
KDM1A-203ENST00000465864 AATKQ6ZMQ8 1374 aa11.41□□□□□ -0.58
KDM1A-203ENST00000465864 MAP3K19Q56UN5 1328 aa11.4□□□□□ -0.58
KDM1A-203ENST00000465864 RXRBP28702 533 aa11.4□□□□□ -0.58
KDM1A-203ENST00000465864 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
KDM1A-203ENST00000465864 VPS72Q15906 364 aa11.4□□□□□ -0.58
KDM1A-203ENST00000465864 COL5A2P05997 1499 aaPredicted RBP11.39□□□□□ -0.59
KDM1A-203ENST00000465864 TNNT2P45379 298 aaPredicted RBP11.39□□□□□ -0.59
KDM1A-203ENST00000465864 RBM6P78332 1123 aaKnown RBP11.39□□□□□ -0.59
KDM1A-203ENST00000465864 EMILIN1Q9Y6C2 1016 aa11.39□□□□□ -0.59
KDM1A-203ENST00000465864 CGNL1Q0VF96 1302 aa11.38□□□□□ -0.59
KDM1A-203ENST00000465864 SPATA31A5Q5VU36 1347 aa11.38□□□□□ -0.59
KDM1A-203ENST00000465864 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
KDM1A-203ENST00000465864 IP6K1Q92551 441 aa11.38□□□□□ -0.59
KDM1A-203ENST00000465864 RGS12O14924 1447 aa11.37□□□□□ -0.59
KDM1A-203ENST00000465864 HOXC9P31274 260 aa11.37□□□□□ -0.59
KDM1A-203ENST00000465864 EVA1CP58658 441 aa11.37□□□□□ -0.59
KDM1A-203ENST00000465864 DDX10Q13206 875 aaKnown RBP11.37□□□□□ -0.59
KDM1A-203ENST00000465864 POLKQ9UBT6 870 aa11.37□□□□□ -0.59
KDM1A-203ENST00000465864 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
KDM1A-203ENST00000465864 KNSTRNQ9Y448 316 aa11.37□□□□□ -0.59
KDM1A-203ENST00000465864 SPATA31A1Q5TZJ5 1347 aa11.36□□□□□ -0.59
KDM1A-203ENST00000465864 MSH5O43196 834 aa11.36□□□□□ -0.59
KDM1A-203ENST00000465864 ONECUT3O60422 494 aaPredicted RBP11.36□□□□□ -0.59
KDM1A-203ENST00000465864 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
KDM1A-203ENST00000465864 HSP90AB2PQ58FF8 381 aa11.36□□□□□ -0.59
KDM1A-203ENST00000465864 CC2D1BQ5T0F9 858 aaKnown RBP11.36□□□□□ -0.59
KDM1A-203ENST00000465864 USP35Q9P2H5 1018 aa11.36□□□□□ -0.59
KDM1A-203ENST00000465864 ANKRD24Q8TF21 1146 aa11.35□□□□□ -0.59
KDM1A-203ENST00000465864 LTV1Q96GA3 475 aaPredicted RBP11.35□□□□□ -0.59
KDM1A-203ENST00000465864 AMPHP49418 695 aa11.34□□□□□ -0.59
KDM1A-203ENST00000465864 MORC1Q86VD1 984 aa11.34□□□□□ -0.59
KDM1A-203ENST00000465864 SEPT12Q8IYM1 358 aa11.34□□□□□ -0.59
KDM1A-203ENST00000465864 WDR17Q8IZU2 1322 aa11.34□□□□□ -0.59
KDM1A-203ENST00000465864 THSD7AQ9UPZ6 1657 aa11.33□□□□□ -0.6
KDM1A-203ENST00000465864 FAM182BQ5T319 152 aa11.33□□□□□ -0.6
KDM1A-203ENST00000465864 CRB1P82279 1406 aa11.33□□□□□ -0.6
KDM1A-203ENST00000465864 ERBB3P21860 1342 aa11.33□□□□□ -0.6
KDM1A-203ENST00000465864 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
KDM1A-203ENST00000465864 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
KDM1A-203ENST00000465864 ABCC6O95255 1503 aa11.32□□□□□ -0.6
KDM1A-203ENST00000465864 PPM1GO15355 546 aaPredicted RBP11.32□□□□□ -0.6
KDM1A-203ENST00000465864 NBPF6Q5VWK0 638 aa11.32□□□□□ -0.6
KDM1A-203ENST00000465864 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
KDM1A-203ENST00000465864 NBPF4Q96M43 638 aa11.32□□□□□ -0.6
KDM1A-203ENST00000465864 FAM208AQ9UK61 1670 aaKnown RBP11.32□□□□□ -0.6
KDM1A-203ENST00000465864 NSD2O96028 1365 aa11.31□□□□□ -0.6
KDM1A-203ENST00000465864 ZNF316A6NFI3 1004 aaPredicted RBP11.31□□□□□ -0.6
KDM1A-203ENST00000465864 CSB-PGBD3P0DP91 1061 aa11.31□□□□□ -0.6
KDM1A-203ENST00000465864 TCP11L2Q8N4U5 519 aa11.31□□□□□ -0.6
KDM1A-203ENST00000465864 USHBP1Q8N6Y0 703 aa11.31□□□□□ -0.6
KDM1A-203ENST00000465864 CARD10Q9BWT7 1032 aa11.31□□□□□ -0.6
KDM1A-203ENST00000465864 INSRP06213 1382 aa11.3□□□□□ -0.6
KDM1A-203ENST00000465864 NPC1L1Q9UHC9 1359 aa11.3□□□□□ -0.6
KDM1A-203ENST00000465864 BLMP54132 1417 aaPredicted RBP11.3□□□□□ -0.6
KDM1A-203ENST00000465864 BARGINQ6ZT62 677 aa11.3□□□□□ -0.6
KDM1A-203ENST00000465864 NLRP2Q9NX02 1062 aa11.3□□□□□ -0.6
KDM1A-203ENST00000465864 DISP2A7MBM2 1401 aa11.29□□□□□ -0.6
KDM1A-203ENST00000465864 MTHFSP49914 203 aa11.29□□□□□ -0.6
KDM1A-203ENST00000465864 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
KDM1A-203ENST00000465864 PARP4Q9UKK3 1724 aaKnown RBP11.29□□□□□ -0.6
KDM1A-203ENST00000465864 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
KDM1A-203ENST00000465864 FLT4P35916 1363 aa11.28□□□□□ -0.6
KDM1A-203ENST00000465864 SMG6Q86US8 1419 aaKnown RBP11.28□□□□□ -0.6
KDM1A-203ENST00000465864 EP400Q96L91 3159 aa11.28□□□□□ -0.6
KDM1A-203ENST00000465864 EYA1Q99502 592 aa11.28□□□□□ -0.6
KDM1A-203ENST00000465864 LRRC37A3O60309 1634 aa11.27□□□□□ -0.6
KDM1A-203ENST00000465864 THRAP3Q9Y2W1 955 aaKnown RBP11.27□□□□□ -0.61
KDM1A-203ENST00000465864 KIF24Q5T7B8 1368 aa11.27□□□□□ -0.61
KDM1A-203ENST00000465864 SHANK3Q9BYB0 1731 aa11.26□□□□□ -0.61
KDM1A-203ENST00000465864 A0A0G2JS52 829 aa11.26□□□□□ -0.61
KDM1A-203ENST00000465864 SOCS7O14512 581 aa11.26□□□□□ -0.61
KDM1A-203ENST00000465864 PPP2R1AP30153 589 aa11.26□□□□□ -0.61
KDM1A-203ENST00000465864 MYT1Q01538 1121 aa11.26□□□□□ -0.61
KDM1A-203ENST00000465864 KRT27Q7Z3Y8 459 aa11.26□□□□□ -0.61
KDM1A-203ENST00000465864 UPF1Q92900 1129 aaKnown RBP eCLIP11.26□□□□□ -0.61
KDM1A-203ENST00000465864 IL13P35225 146 aa11.25□□□□□ -0.61
KDM1A-203ENST00000465864 MARCH10Q8NA82 808 aaPredicted RBP11.25□□□□□ -0.61
KDM1A-203ENST00000465864 RGPD1P0DJD0 1748 aa11.25□□□□□ -0.61
KDM1A-203ENST00000465864 SBF2Q86WG5 1849 aa11.25□□□□□ -0.61
KDM1A-203ENST00000465864 COL3A1P02461 1466 aaPredicted RBP11.25□□□□□ -0.61
KDM1A-203ENST00000465864 MEGF6O75095 1541 aa11.25□□□□□ -0.61
KDM1A-203ENST00000465864 PTF1AQ7RTS3 328 aa11.24□□□□□ -0.61
KDM1A-203ENST00000465864 PARD3Q8TEW0 1356 aa11.24□□□□□ -0.61
KDM1A-203ENST00000465864 NCAPD2Q15021 1401 aa11.24□□□□□ -0.61
KDM1A-203ENST00000465864 IL2RBP14784 551 aa11.23□□□□□ -0.61
KDM1A-203ENST00000465864 AEBP1Q8IUX7 1158 aa11.23□□□□□ -0.61
KDM1A-203ENST00000465864 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
KDM1A-203ENST00000465864 KAT6BQ8WYB5 2073 aa11.22□□□□□ -0.61
KDM1A-203ENST00000465864 EXOC5O00471 708 aa11.21□□□□□ -0.61
KDM1A-203ENST00000465864 DDB1Q16531 1140 aa11.21□□□□□ -0.61
KDM1A-203ENST00000465864 PDE3BQ13370 1112 aa11.2□□□□□ -0.62
KDM1A-203ENST00000465864 OVOS2A0A0G2JMS6 1433 aa11.19□□□□□ -0.62
KDM1A-203ENST00000465864 TNS2Q63HR2 1409 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms