RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 CD163L1Q9NR16 1453 aa8.1□□□□□ -1.11
SIK3-207ENST00000465421 TOPAZ1Q8N9V7 1692 aa8.1□□□□□ -1.11
SIK3-207ENST00000465421 CPS1P31327 1500 aa8.1□□□□□ -1.11
SIK3-207ENST00000465421 GBP4Q96PP9 640 aa8.1□□□□□ -1.11
SIK3-207ENST00000465421 HSP90B1P14625 803 aaKnown RBP8.09□□□□□ -1.11
SIK3-207ENST00000465421 PDLIM2Q96JY6 352 aa8.09□□□□□ -1.11
SIK3-207ENST00000465421 NOL7Q9UMY1 257 aaKnown RBP8.09□□□□□ -1.11
SIK3-207ENST00000465421 UBR1Q8IWV7 1749 aa8.09□□□□□ -1.11
SIK3-207ENST00000465421 ANKRD36BQ8N2N9 1353 aa8.09□□□□□ -1.11
SIK3-207ENST00000465421 ZBTB7CA1YPR0 619 aa8.09□□□□□ -1.11
SIK3-207ENST00000465421 KIF2CQ99661 725 aa8.09□□□□□ -1.11
SIK3-207ENST00000465421 CARD14Q9BXL6 1004 aa8.09□□□□□ -1.11
SIK3-207ENST00000465421 SLC52A1Q9NWF4 448 aa8.09□□□□□ -1.11
SIK3-207ENST00000465421 A2ML1A8K2U0 1454 aa8.08□□□□□ -1.12
SIK3-207ENST00000465421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.08□□□□□ -1.12
SIK3-207ENST00000465421 KLHL40Q2TBA0 621 aa8.08□□□□□ -1.12
SIK3-207ENST00000465421 NRKQ7Z2Y5 1582 aa8.08□□□□□ -1.12
SIK3-207ENST00000465421 MSNP26038 577 aaKnown RBP8.08□□□□□ -1.12
SIK3-207ENST00000465421 ZNF445P59923 1031 aa8.08□□□□□ -1.12
SIK3-207ENST00000465421 HDAC1Q13547 482 aaPredicted RBP8.08□□□□□ -1.12
SIK3-207ENST00000465421 MVPQ14764 893 aaKnown RBP8.08□□□□□ -1.12
SIK3-207ENST00000465421 MTERF4Q7Z6M4 381 aaKnown RBP8.08□□□□□ -1.12
SIK3-207ENST00000465421 FAM13BQ9NYF5 915 aa8.08□□□□□ -1.12
SIK3-207ENST00000465421 ADAMTSL3P82987 1691 aa8.07□□□□□ -1.12
SIK3-207ENST00000465421 DYNC1I1O14576 645 aa8.07□□□□□ -1.12
SIK3-207ENST00000465421 UTP14CQ5TAP6 766 aaKnown RBP8.07□□□□□ -1.12
SIK3-207ENST00000465421 R3HCC1Q9Y3T6 440 aaKnown RBP8.07□□□□□ -1.12
SIK3-207ENST00000465421 AK9Q5TCS8 1911 aa8.07□□□□□ -1.12
SIK3-207ENST00000465421 NSD3Q9BZ95 1437 aa8.07□□□□□ -1.12
SIK3-207ENST00000465421 ABCC11Q96J66 1382 aa8.07□□□□□ -1.12
SIK3-207ENST00000465421 TECPR2O15040 1411 aa8.07□□□□□ -1.12
SIK3-207ENST00000465421 UQCRHLA0A096LP55 91 aa8.06□□□□□ -1.12
SIK3-207ENST00000465421 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
SIK3-207ENST00000465421 UQCRHP07919 91 aa8.06□□□□□ -1.12
SIK3-207ENST00000465421 USP54Q70EL1 1684 aa8.06□□□□□ -1.12
SIK3-207ENST00000465421 YTHDC2Q9H6S0 1430 aaKnown RBP8.06□□□□□ -1.12
SIK3-207ENST00000465421 ATP7BP35670 1465 aa8.06□□□□□ -1.12
SIK3-207ENST00000465421 C3P01024 1663 aa8.06□□□□□ -1.12
SIK3-207ENST00000465421 DMTNQ08495 405 aa8.06□□□□□ -1.12
SIK3-207ENST00000465421 VGFO15240 615 aaPredicted RBP8.05□□□□□ -1.12
SIK3-207ENST00000465421 WDR63Q8IWG1 891 aa8.05□□□□□ -1.12
SIK3-207ENST00000465421 NALCNQ8IZF0 1738 aa8.05□□□□□ -1.12
SIK3-207ENST00000465421 ITSN1Q15811 1721 aa8.05□□□□□ -1.12
SIK3-207ENST00000465421 SSFA2P28290 1259 aa8.05□□□□□ -1.12
SIK3-207ENST00000465421 GGT6Q6P531 493 aa8.05□□□□□ -1.12
SIK3-207ENST00000465421 ZSCAN20P17040 1043 aaPredicted RBP8.04□□□□□ -1.12
SIK3-207ENST00000465421 XPCQ01831 940 aaPredicted RBP8.04□□□□□ -1.12
SIK3-207ENST00000465421 CCDC27Q2M243 656 aa8.04□□□□□ -1.12
SIK3-207ENST00000465421 ZKSCAN5Q9Y2L8 839 aa8.04□□□□□ -1.12
SIK3-207ENST00000465421 A0A0U1RQG5 324 aaPredicted RBP8.04□□□□□ -1.12
SIK3-207ENST00000465421 BAG4O95429 457 aaKnown RBP8.04□□□□□ -1.12
SIK3-207ENST00000465421 MCM5P33992 734 aa8.04□□□□□ -1.12
SIK3-207ENST00000465421 HSP90AB1P08238 724 aaKnown RBP8.04□□□□□ -1.12
SIK3-207ENST00000465421 ANP32BQ92688 251 aaKnown RBP8.04□□□□□ -1.12
SIK3-207ENST00000465421 CCDC94Q9BW85 323 aaPredicted RBP8.04□□□□□ -1.12
SIK3-207ENST00000465421 RBSNQ9H1K0 784 aa8.04□□□□□ -1.12
SIK3-207ENST00000465421 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
SIK3-207ENST00000465421 ZNF142P52746 1687 aaPredicted RBP8.03□□□□□ -1.12
SIK3-207ENST00000465421 K7ELQ4 463 aaPredicted RBP8.03□□□□□ -1.12
SIK3-207ENST00000465421 CSPP1Q1MSJ5 1256 aa8.03□□□□□ -1.12
SIK3-207ENST00000465421 ZSCAN23Q3MJ62 389 aa8.03□□□□□ -1.12
SIK3-207ENST00000465421 RUNDC1Q96C34 613 aa8.03□□□□□ -1.12
SIK3-207ENST00000465421 ATAD2Q6PL18 1390 aa8.03□□□□□ -1.12
SIK3-207ENST00000465421 CYP2E1P05181 493 aaPredicted RBP8.02□□□□□ -1.12
SIK3-207ENST00000465421 SASS6Q6UVJ0 657 aa8.02□□□□□ -1.12
SIK3-207ENST00000465421 DZIP1LQ8IYY4 767 aaKnown RBP8.02□□□□□ -1.12
SIK3-207ENST00000465421 GAS2L2Q8NHY3 880 aa8.02□□□□□ -1.12
SIK3-207ENST00000465421 DDX49Q9Y6V7 483 aaKnown RBP8.02□□□□□ -1.12
SIK3-207ENST00000465421 EVC2Q86UK5 1308 aa8.02□□□□□ -1.13
SIK3-207ENST00000465421 IDI1Q13907 227 aa8.02□□□□□ -1.13
SIK3-207ENST00000465421 ZKSCAN2Q63HK3 967 aa8.02□□□□□ -1.13
SIK3-207ENST00000465421 FAM135BQ49AJ0 1406 aa8.02□□□□□ -1.13
SIK3-207ENST00000465421 PNPLA6Q8IY17 1366 aa8.02□□□□□ -1.13
SIK3-207ENST00000465421 NUCB1Q02818 461 aa8.02□□□□□ -1.13
SIK3-207ENST00000465421 TCP11L2Q8N4U5 519 aa8.02□□□□□ -1.13
SIK3-207ENST00000465421 LMBRD1Q9NUN5 540 aa8.02□□□□□ -1.13
SIK3-207ENST00000465421 LRRC7Q96NW7 1537 aa8.02□□□□□ -1.13
SIK3-207ENST00000465421 DIP2AQ14689 1571 aa8.01□□□□□ -1.13
SIK3-207ENST00000465421 ZHX1Q9UKY1 873 aaPredicted RBP8.01□□□□□ -1.13
SIK3-207ENST00000465421 NCLP19338 710 aaKnown RBP8.01□□□□□ -1.13
SIK3-207ENST00000465421 GOLGA6L22H0YM25 854 aa8.01□□□□□ -1.13
SIK3-207ENST00000465421 BMP2KLQ5H9B9 411 aa8.01□□□□□ -1.13
SIK3-207ENST00000465421 SIRT1Q96EB6 747 aa8.01□□□□□ -1.13
SIK3-207ENST00000465421 PRDM10Q9NQV6 1147 aa8.01□□□□□ -1.13
SIK3-207ENST00000465421 RIMS2Q9UQ26 1411 aa8□□□□□ -1.13
SIK3-207ENST00000465421 CT47B1P0C2W7 299 aaPredicted RBP8□□□□□ -1.13
SIK3-207ENST00000465421 PRIM1P49642 420 aaKnown RBP8□□□□□ -1.13
SIK3-207ENST00000465421 RGPD1P0DJD0 1748 aa8□□□□□ -1.13
SIK3-207ENST00000465421 A0A1W2PP64 1363 aa8□□□□□ -1.13
SIK3-207ENST00000465421 TRIM27P14373 513 aa8□□□□□ -1.13
SIK3-207ENST00000465421 RBM42Q9BTD8 480 aaKnown RBP8□□□□□ -1.13
SIK3-207ENST00000465421 ZBTB40Q9NUA8 1239 aa8□□□□□ -1.13
SIK3-207ENST00000465421 RNF216Q9NWF9 866 aaPredicted RBP8□□□□□ -1.13
SIK3-207ENST00000465421 CPSF1Q10570 1443 aaKnown RBP8□□□□□ -1.13
SIK3-207ENST00000465421 IGSF3O75054 1194 aa7.99□□□□□ -1.13
SIK3-207ENST00000465421 ZNF710Q8N1W2 664 aa7.99□□□□□ -1.13
SIK3-207ENST00000465421 DDX19BQ9UMR2 479 aa7.99□□□□□ -1.13
SIK3-207ENST00000465421 SLIT1O75093 1534 aa7.99□□□□□ -1.13
SIK3-207ENST00000465421 TNRQ92752 1358 aa7.99□□□□□ -1.13
SIK3-207ENST00000465421 GTF2F1P35269 517 aaKnown RBP eCLIP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms