RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 LRP5O75197 1615 aa30.75■■■□□ 2.51
EDEM1-205ENST00000465187 USP54Q70EL1 1684 aa30.74■■■□□ 2.51
EDEM1-205ENST00000465187 TTC21AQ8NDW8 1320 aa30.74■■■□□ 2.51
EDEM1-205ENST00000465187 CAMKK2Q96RR4 588 aa30.74■■■□□ 2.51
EDEM1-205ENST00000465187 THRAP3Q9Y2W1 955 aaKnown RBP30.74■■■□□ 2.51
EDEM1-205ENST00000465187 SBF2Q86WG5 1849 aa30.74■■■□□ 2.51
EDEM1-205ENST00000465187 NUP188Q5SRE5 1749 aa30.73■■■□□ 2.51
EDEM1-205ENST00000465187 SLC12A5Q9H2X9 1139 aa30.73■■■□□ 2.51
EDEM1-205ENST00000465187 APBA3O96018 575 aa30.72■■■□□ 2.51
EDEM1-205ENST00000465187 TOM1L2Q6ZVM7 507 aa30.72■■■□□ 2.51
EDEM1-205ENST00000465187 NME9Q86XW9 330 aa30.72■■■□□ 2.51
EDEM1-205ENST00000465187 LTN1O94822 1766 aa30.71■■■□□ 2.51
EDEM1-205ENST00000465187 R3HDM1Q15032 1099 aaKnown RBP30.71■■■□□ 2.51
EDEM1-205ENST00000465187 TMC1Q8TDI8 760 aa30.71■■■□□ 2.51
EDEM1-205ENST00000465187 WDR17Q8IZU2 1322 aa30.7■■■□□ 2.5
EDEM1-205ENST00000465187 KCNH5Q8NCM2 988 aa30.67■■■□□ 2.5
EDEM1-205ENST00000465187 PTF1AQ7RTS3 328 aa30.66■■■□□ 2.5
EDEM1-205ENST00000465187 A0A1W2PP64 1363 aa30.66■■■□□ 2.5
EDEM1-205ENST00000465187 USP31Q70CQ4 1352 aa30.66■■■□□ 2.5
EDEM1-205ENST00000465187 TESK2Q96S53 571 aa30.65■■■□□ 2.5
EDEM1-205ENST00000465187 ST20-MTHFSA0A0A6YYL1 179 aa30.63■■■□□ 2.49
EDEM1-205ENST00000465187 OVOS2A0A0G2JMS6 1433 aa30.62■■■□□ 2.49
EDEM1-205ENST00000465187 OVOS2A0A0J9YW53 1432 aa30.62■■■□□ 2.49
EDEM1-205ENST00000465187 OVOS2Q6IE36 1432 aa30.62■■■□□ 2.49
EDEM1-205ENST00000465187 CSB-PGBD3P0DP91 1061 aa30.61■■■□□ 2.49
EDEM1-205ENST00000465187 DDB1Q16531 1140 aa30.61■■■□□ 2.49
EDEM1-205ENST00000465187 EDC4Q6P2E9 1401 aaKnown RBP30.6■■■□□ 2.49
EDEM1-205ENST00000465187 MARCH10Q8NA82 808 aaPredicted RBP30.59■■■□□ 2.49
EDEM1-205ENST00000465187 ABCC6O95255 1503 aa30.58■■■□□ 2.49
EDEM1-205ENST00000465187 HDGFL2Q7Z4V5 671 aaPredicted RBP30.58■■■□□ 2.49
EDEM1-205ENST00000465187 CARD10Q9BWT7 1032 aa30.58■■■□□ 2.49
EDEM1-205ENST00000465187 PARD3Q8TEW0 1356 aa30.56■■■□□ 2.48
EDEM1-205ENST00000465187 PCGF6Q9BYE7 350 aa30.53■■■□□ 2.48
EDEM1-205ENST00000465187 RGPD3A6NKT7 1758 aaPredicted RBP30.53■■■□□ 2.48
EDEM1-205ENST00000465187 RGPD4Q7Z3J3 1758 aa30.53■■■□□ 2.48
EDEM1-205ENST00000465187 TERF2IPQ9NYB0 399 aa30.52■■■□□ 2.48
EDEM1-205ENST00000465187 ERBB3P21860 1342 aa30.51■■■□□ 2.48
EDEM1-205ENST00000465187 PUS7Q96PZ0 661 aaKnown RBP30.5■■■□□ 2.47
EDEM1-205ENST00000465187 FBLN1P23142 703 aa30.49■■■□□ 2.47
EDEM1-205ENST00000465187 USP47Q96K76 1375 aa30.48■■■□□ 2.47
EDEM1-205ENST00000465187 CCDC7Q96M83 1385 aa30.48■■■□□ 2.47
EDEM1-205ENST00000465187 TNS2Q63HR2 1409 aa30.47■■■□□ 2.47
EDEM1-205ENST00000465187 RGPD2P0DJD1 1756 aa30.47■■■□□ 2.47
EDEM1-205ENST00000465187 NLRP2Q9NX02 1062 aa30.47■■■□□ 2.47
EDEM1-205ENST00000465187 ANKRD24Q8TF21 1146 aa30.46■■■□□ 2.47
EDEM1-205ENST00000465187 CDCA7Q9BWT1 371 aaPredicted RBP30.46■■■□□ 2.47
EDEM1-205ENST00000465187 BCL11BQ9C0K0 894 aaPredicted RBP30.44■■■□□ 2.46
EDEM1-205ENST00000465187 ANO8Q9HCE9 1232 aaPredicted RBP30.44■■■□□ 2.46
EDEM1-205ENST00000465187 BCL9O00512 1426 aa30.44■■■□□ 2.46
EDEM1-205ENST00000465187 EXOC5O00471 708 aa30.43■■■□□ 2.46
EDEM1-205ENST00000465187 PROM2Q8N271 834 aa30.43■■■□□ 2.46
EDEM1-205ENST00000465187 NHSQ6T4R5 1651 aa30.42■■■□□ 2.46
EDEM1-205ENST00000465187 KCNQ2O43526 872 aa30.42■■■□□ 2.46
EDEM1-205ENST00000465187 NINLQ9Y2I6 1382 aa30.41■■■□□ 2.46
EDEM1-205ENST00000465187 C11orf95C9JLR9 678 aaPredicted RBP30.41■■■□□ 2.46
EDEM1-205ENST00000465187 MYOM1P52179 1685 aa30.4■■■□□ 2.46
EDEM1-205ENST00000465187 PLSCR1O15162 318 aa30.4■■■□□ 2.46
EDEM1-205ENST00000465187 LTV1Q96GA3 475 aaPredicted RBP30.4■■■□□ 2.46
EDEM1-205ENST00000465187 ANKRD36BQ8N2N9 1353 aa30.4■■■□□ 2.46
EDEM1-205ENST00000465187 NBPF14Q5TI25 921 aa30.39■■■□□ 2.46
EDEM1-205ENST00000465187 ACSBG1Q96GR2 724 aa30.38■■■□□ 2.45
EDEM1-205ENST00000465187 FAM208AQ9UK61 1670 aaKnown RBP30.38■■■□□ 2.45
EDEM1-205ENST00000465187 MAP3K19Q56UN5 1328 aa30.38■■■□□ 2.45
EDEM1-205ENST00000465187 CASZ1Q86V15 1759 aa30.38■■■□□ 2.45
EDEM1-205ENST00000465187 IP6K1Q92551 441 aa30.37■■■□□ 2.45
EDEM1-205ENST00000465187 KIF20BQ96Q89 1820 aa30.36■■■□□ 2.45
EDEM1-205ENST00000465187 IL2RBP14784 551 aa30.36■■■□□ 2.45
EDEM1-205ENST00000465187 PDGFDQ9GZP0 370 aaPredicted RBP30.36■■■□□ 2.45
EDEM1-205ENST00000465187 BTAF1O14981 1849 aa30.36■■■□□ 2.45
EDEM1-205ENST00000465187 COG3Q96JB2 828 aa30.35■■■□□ 2.45
EDEM1-205ENST00000465187 TMF1P82094 1093 aa30.34■■■□□ 2.45
EDEM1-205ENST00000465187 SHANK3Q9BYB0 1731 aa30.33■■■□□ 2.45
EDEM1-205ENST00000465187 GGNBP2Q9H3C7 697 aa30.33■■■□□ 2.45
EDEM1-205ENST00000465187 HOXC9P31274 260 aa30.32■■■□□ 2.44
EDEM1-205ENST00000465187 KAT6BQ8WYB5 2073 aa30.31■■■□□ 2.44
EDEM1-205ENST00000465187 RRS1Q15050 365 aaKnown RBP30.31■■■□□ 2.44
EDEM1-205ENST00000465187 FYB1O15117 783 aa30.3■■■□□ 2.44
EDEM1-205ENST00000465187 TXNRD1Q16881 649 aa30.3■■■□□ 2.44
EDEM1-205ENST00000465187 AMPHP49418 695 aa30.27■■■□□ 2.44
EDEM1-205ENST00000465187 DOT1LQ8TEK3 1739 aa30.25■■■□□ 2.43
EDEM1-205ENST00000465187 MEGF6O75095 1541 aa30.25■■■□□ 2.43
EDEM1-205ENST00000465187 PAPPAQ13219 1627 aa30.25■■■□□ 2.43
EDEM1-205ENST00000465187 SLC24A1O60721 1099 aa30.24■■■□□ 2.43
EDEM1-205ENST00000465187 CARD14Q9BXL6 1004 aa30.24■■■□□ 2.43
EDEM1-205ENST00000465187 DDX54Q8TDD1 881 aaKnown RBP30.23■■■□□ 2.43
EDEM1-205ENST00000465187 USHBP1Q8N6Y0 703 aa30.22■■■□□ 2.43
EDEM1-205ENST00000465187 SPON1Q9HCB6 807 aa30.22■■■□□ 2.43
EDEM1-205ENST00000465187 ZBTB7AO95365 584 aa30.19■■■□□ 2.42
EDEM1-205ENST00000465187 NBPF6Q5VWK0 638 aa30.19■■■□□ 2.42
EDEM1-205ENST00000465187 NBPF4Q96M43 638 aa30.19■■■□□ 2.42
EDEM1-205ENST00000465187 NSD3Q9BZ95 1437 aa30.19■■■□□ 2.42
EDEM1-205ENST00000465187 RTL1A6NKG5 1358 aa30.18■■■□□ 2.42
EDEM1-205ENST00000465187 SLC15A2Q16348 729 aa30.16■■■□□ 2.42
EDEM1-205ENST00000465187 LRRC4BQ9NT99 713 aa30.16■■■□□ 2.42
EDEM1-205ENST00000465187 HSP90AB2PQ58FF8 381 aa30.15■■■□□ 2.42
EDEM1-205ENST00000465187 STK32BQ9NY57 414 aa30.15■■■□□ 2.42
EDEM1-205ENST00000465187 PPP1R1BQ9UD71 204 aaPredicted RBP30.14■■■□□ 2.42
EDEM1-205ENST00000465187 ZNF827Q17R98 1081 aa30.13■■■□□ 2.41
EDEM1-205ENST00000465187 ATF5Q9Y2D1 282 aaPredicted RBP30.13■■■□□ 2.41
EDEM1-205ENST00000465187 CDCA8Q53HL2 280 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms