RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
APTX-213ENST00000465003 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
APTX-213ENST00000465003 UNC5CLQ8IV45 518 aa16.25■□□□□ 0.19
APTX-213ENST00000465003 QTRT2Q9H974 415 aaKnown RBP16.25■□□□□ 0.19
APTX-213ENST00000465003 PEAK1Q9H792 1746 aa16.24■□□□□ 0.19
APTX-213ENST00000465003 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
APTX-213ENST00000465003 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
APTX-213ENST00000465003 ZNF772Q68DY9 489 aaPredicted RBP16.24■□□□□ 0.19
APTX-213ENST00000465003 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
APTX-213ENST00000465003 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
APTX-213ENST00000465003 LARP1Q6PKG0 1096 aaKnown RBP16.23■□□□□ 0.19
APTX-213ENST00000465003 EP400Q96L91 3159 aa16.23■□□□□ 0.19
APTX-213ENST00000465003 COL5A2P05997 1499 aaPredicted RBP16.23■□□□□ 0.19
APTX-213ENST00000465003 AATKQ6ZMQ8 1374 aa16.22■□□□□ 0.19
APTX-213ENST00000465003 AMPHP49418 695 aa16.22■□□□□ 0.19
APTX-213ENST00000465003 EVA1CP58658 441 aa16.22■□□□□ 0.19
APTX-213ENST00000465003 ILDR2Q71H61 639 aa16.22■□□□□ 0.19
APTX-213ENST00000465003 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.21■□□□□ 0.19
APTX-213ENST00000465003 ATRNO75882 1429 aa16.21■□□□□ 0.19
APTX-213ENST00000465003 NSD2O96028 1365 aa16.2■□□□□ 0.18
APTX-213ENST00000465003 HOXC9P31274 260 aa16.2■□□□□ 0.18
APTX-213ENST00000465003 MYT1Q01538 1121 aa16.2■□□□□ 0.18
APTX-213ENST00000465003 TRPC5Q9UL62 973 aaPredicted RBP16.2■□□□□ 0.18
APTX-213ENST00000465003 GLI3P10071 1580 aa16.2■□□□□ 0.18
APTX-213ENST00000465003 HSP90AB2PQ58FF8 381 aa16.2■□□□□ 0.18
APTX-213ENST00000465003 POLKQ9UBT6 870 aa16.2■□□□□ 0.18
APTX-213ENST00000465003 CSB-PGBD3P0DP91 1061 aa16.19■□□□□ 0.18
APTX-213ENST00000465003 RGPD2P0DJD1 1756 aa16.18■□□□□ 0.18
APTX-213ENST00000465003 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
APTX-213ENST00000465003 RXRBP28702 533 aa16.17■□□□□ 0.18
APTX-213ENST00000465003 VPS72Q15906 364 aa16.17■□□□□ 0.18
APTX-213ENST00000465003 FAM98CQ17RN3 349 aaKnown RBP16.17■□□□□ 0.18
APTX-213ENST00000465003 TOM1L2Q6ZVM7 507 aa16.17■□□□□ 0.18
APTX-213ENST00000465003 ANKRD24Q8TF21 1146 aa16.17■□□□□ 0.18
APTX-213ENST00000465003 IP6K1Q92551 441 aa16.17■□□□□ 0.18
APTX-213ENST00000465003 ERBB3P21860 1342 aa16.17■□□□□ 0.18
APTX-213ENST00000465003 A0A0G2JS52 829 aa16.17■□□□□ 0.18
APTX-213ENST00000465003 USHBP1Q8N6Y0 703 aa16.15■□□□□ 0.18
APTX-213ENST00000465003 SPATA31A5Q5VU36 1347 aa16.15■□□□□ 0.18
APTX-213ENST00000465003 SPATA31A7Q8IWB4 1347 aa16.15■□□□□ 0.18
APTX-213ENST00000465003 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
APTX-213ENST00000465003 FLT4P35916 1363 aa16.15■□□□□ 0.18
APTX-213ENST00000465003 RGS12O14924 1447 aa16.15■□□□□ 0.18
APTX-213ENST00000465003 RBM6P78332 1123 aaKnown RBP16.15■□□□□ 0.18
APTX-213ENST00000465003 NLRP2Q9NX02 1062 aa16.15■□□□□ 0.18
APTX-213ENST00000465003 SPATA31A1Q5TZJ5 1347 aa16.15■□□□□ 0.18
APTX-213ENST00000465003 MTHFSP49914 203 aa16.13■□□□□ 0.17
APTX-213ENST00000465003 BLMP54132 1417 aaPredicted RBP16.13■□□□□ 0.17
APTX-213ENST00000465003 CRB1P82279 1406 aa16.13■□□□□ 0.17
APTX-213ENST00000465003 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
APTX-213ENST00000465003 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
APTX-213ENST00000465003 ABCC6O95255 1503 aa16.12■□□□□ 0.17
APTX-213ENST00000465003 INSRP06213 1382 aa16.11■□□□□ 0.17
APTX-213ENST00000465003 NBPF6Q5VWK0 638 aa16.11■□□□□ 0.17
APTX-213ENST00000465003 NBPF4Q96M43 638 aa16.11■□□□□ 0.17
APTX-213ENST00000465003 FAM182BQ5T319 152 aa16.1■□□□□ 0.17
APTX-213ENST00000465003 TCP11L2Q8N4U5 519 aa16.1■□□□□ 0.17
APTX-213ENST00000465003 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
APTX-213ENST00000465003 BRWD3Q6RI45 1802 aa16.1■□□□□ 0.17
APTX-213ENST00000465003 EIF4A2Q14240 407 aaKnown RBP16.09■□□□□ 0.17
APTX-213ENST00000465003 SEPT12Q8IYM1 358 aa16.09■□□□□ 0.17
APTX-213ENST00000465003 PARD3Q8TEW0 1356 aa16.09■□□□□ 0.17
APTX-213ENST00000465003 CDK12Q9NYV4 1490 aaPredicted RBP16.09■□□□□ 0.17
APTX-213ENST00000465003 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
APTX-213ENST00000465003 FAM208AQ9UK61 1670 aaKnown RBP16.07■□□□□ 0.16
APTX-213ENST00000465003 WNK3Q9BYP7 1800 aa16.07■□□□□ 0.16
APTX-213ENST00000465003 CARD10Q9BWT7 1032 aa16.07■□□□□ 0.16
APTX-213ENST00000465003 THSD7AQ9UPZ6 1657 aa16.06■□□□□ 0.16
APTX-213ENST00000465003 KIF24Q5T7B8 1368 aa16.06■□□□□ 0.16
APTX-213ENST00000465003 EYA1Q99502 592 aa16.06■□□□□ 0.16
APTX-213ENST00000465003 LRRC37A3O60309 1634 aa16.05■□□□□ 0.16
APTX-213ENST00000465003 MEGF6O75095 1541 aa16.04■□□□□ 0.16
APTX-213ENST00000465003 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
APTX-213ENST00000465003 PRKRIP1Q9H875 184 aaPredicted RBP16.04■□□□□ 0.16
APTX-213ENST00000465003 COL3A1P02461 1466 aaPredicted RBP16.03■□□□□ 0.16
APTX-213ENST00000465003 BARGINQ6ZT62 677 aa16.03■□□□□ 0.16
APTX-213ENST00000465003 DISP2A7MBM2 1401 aa16.02■□□□□ 0.16
APTX-213ENST00000465003 ONECUT3O60422 494 aaPredicted RBP16.02■□□□□ 0.16
APTX-213ENST00000465003 HMOX1P09601 288 aa16.02■□□□□ 0.15
APTX-213ENST00000465003 IL13P35225 146 aa16.02■□□□□ 0.15
APTX-213ENST00000465003 THRAP3Q9Y2W1 955 aaKnown RBP16.02■□□□□ 0.15
APTX-213ENST00000465003 IL2RBP14784 551 aa16.01■□□□□ 0.15
APTX-213ENST00000465003 PARP4Q9UKK3 1724 aaKnown RBP16.01■□□□□ 0.15
APTX-213ENST00000465003 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
APTX-213ENST00000465003 RALBP1Q15311 655 aa16■□□□□ 0.15
APTX-213ENST00000465003 DIAPH1O60610 1272 aaKnown RBP16■□□□□ 0.15
APTX-213ENST00000465003 DDB1Q16531 1140 aa16■□□□□ 0.15
APTX-213ENST00000465003 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
APTX-213ENST00000465003 RGPD1P0DJD0 1748 aa15.99■□□□□ 0.15
APTX-213ENST00000465003 SULT6B1Q6IMI4 303 aa15.99■□□□□ 0.15
APTX-213ENST00000465003 IGSF1Q8N6C5 1336 aa15.99■□□□□ 0.15
APTX-213ENST00000465003 MYBBP1AQ9BQG0 1328 aaKnown RBP15.99■□□□□ 0.15
APTX-213ENST00000465003 CCDC184Q52MB2 194 aa15.98■□□□□ 0.15
APTX-213ENST00000465003 PDE3BQ13370 1112 aa15.97■□□□□ 0.15
APTX-213ENST00000465003 DDX54Q8TDD1 881 aaKnown RBP15.97■□□□□ 0.15
APTX-213ENST00000465003 RAPGEF4Q8WZA2 1011 aa15.97■□□□□ 0.15
APTX-213ENST00000465003 SHANK3Q9BYB0 1731 aa15.97■□□□□ 0.15
APTX-213ENST00000465003 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
APTX-213ENST00000465003 TNS2Q63HR2 1409 aa15.96■□□□□ 0.15
APTX-213ENST00000465003 ANP32CO43423 234 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms