RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 SSH2Q76I76 1423 aa25.43■■□□□ 1.66
POLR2J3-203ENST00000464525 CLUAP1Q96AJ1 413 aa25.43■■□□□ 1.66
POLR2J3-203ENST00000464525 PHF8Q9UPP1 1060 aa25.43■■□□□ 1.66
POLR2J3-203ENST00000464525 STRCP1A6NGW2 1772 aa25.43■■□□□ 1.66
POLR2J3-203ENST00000464525 IL13P35225 146 aa25.42■■□□□ 1.66
POLR2J3-203ENST00000464525 IGHDP01880 384 aa25.4■■□□□ 1.66
POLR2J3-203ENST00000464525 PNNQ9H307 717 aaKnown RBP25.4■■□□□ 1.66
POLR2J3-203ENST00000464525 STRCQ7RTU9 1775 aa25.39■■□□□ 1.66
POLR2J3-203ENST00000464525 PAK3O75914 559 aaPredicted RBP25.39■■□□□ 1.66
POLR2J3-203ENST00000464525 MS4A1P11836 297 aa25.39■■□□□ 1.66
POLR2J3-203ENST00000464525 NUTM2GQ5VZR2 741 aa25.39■■□□□ 1.66
POLR2J3-203ENST00000464525 ORAI2Q96SN7 254 aa25.39■■□□□ 1.66
POLR2J3-203ENST00000464525 BACH2Q9BYV9 841 aa25.39■■□□□ 1.65
POLR2J3-203ENST00000464525 TMEM94Q12767 1356 aa25.38■■□□□ 1.65
POLR2J3-203ENST00000464525 THUMPD2Q9BTF0 503 aaKnown RBP25.38■■□□□ 1.65
POLR2J3-203ENST00000464525 AATKQ6ZMQ8 1374 aa25.37■■□□□ 1.65
POLR2J3-203ENST00000464525 OVOS2A0A0J9YW53 1432 aa25.37■■□□□ 1.65
POLR2J3-203ENST00000464525 OVOS2Q6IE36 1432 aa25.37■■□□□ 1.65
POLR2J3-203ENST00000464525 TTC21AQ8NDW8 1320 aa25.37■■□□□ 1.65
POLR2J3-203ENST00000464525 NPM2Q86SE8 214 aaKnown RBP25.36■■□□□ 1.65
POLR2J3-203ENST00000464525 C19orf44Q9H6X5 657 aa25.36■■□□□ 1.65
POLR2J3-203ENST00000464525 CDK12Q9NYV4 1490 aaPredicted RBP25.35■■□□□ 1.65
POLR2J3-203ENST00000464525 LAS1LQ9Y4W2 734 aaKnown RBP25.35■■□□□ 1.65
POLR2J3-203ENST00000464525 NEFMP07197 916 aa25.34■■□□□ 1.65
POLR2J3-203ENST00000464525 RGS3P49796 1198 aa25.34■■□□□ 1.65
POLR2J3-203ENST00000464525 NLRP6P59044 892 aa25.34■■□□□ 1.65
POLR2J3-203ENST00000464525 SSH1Q8WYL5 1049 aa25.34■■□□□ 1.65
POLR2J3-203ENST00000464525 XPCQ01831 940 aaPredicted RBP25.33■■□□□ 1.65
POLR2J3-203ENST00000464525 SMC4Q9NTJ3 1288 aa25.33■■□□□ 1.65
POLR2J3-203ENST00000464525 IL16Q14005 1332 aa25.33■■□□□ 1.64
POLR2J3-203ENST00000464525 PIK3C2AO00443 1686 aa25.32■■□□□ 1.64
POLR2J3-203ENST00000464525 FOXO3O43524 673 aa25.32■■□□□ 1.64
POLR2J3-203ENST00000464525 ANP32AP39687 249 aaKnown RBP25.32■■□□□ 1.64
POLR2J3-203ENST00000464525 PSME1Q06323 249 aa25.32■■□□□ 1.64
POLR2J3-203ENST00000464525 NFE2L2Q16236 605 aa25.32■■□□□ 1.64
POLR2J3-203ENST00000464525 ABTB2Q8N961 1025 aa25.32■■□□□ 1.64
POLR2J3-203ENST00000464525 ZNF335Q9H4Z2 1342 aaPredicted RBP25.3■■□□□ 1.64
POLR2J3-203ENST00000464525 ATF3P18847 181 aa25.29■■□□□ 1.64
POLR2J3-203ENST00000464525 ZKSCAN2Q63HK3 967 aa25.29■■□□□ 1.64
POLR2J3-203ENST00000464525 PCDHB15Q9Y5E8 787 aa25.29■■□□□ 1.64
POLR2J3-203ENST00000464525 AEBP1Q8IUX7 1158 aa25.28■■□□□ 1.64
POLR2J3-203ENST00000464525 USP31Q70CQ4 1352 aa25.28■■□□□ 1.64
POLR2J3-203ENST00000464525 CT47B1P0C2W7 299 aaPredicted RBP25.28■■□□□ 1.64
POLR2J3-203ENST00000464525 EIF4A2Q14240 407 aaKnown RBP25.27■■□□□ 1.64
POLR2J3-203ENST00000464525 C1orf167Q5SNV9 1468 aa25.27■■□□□ 1.64
POLR2J3-203ENST00000464525 FAM83GA6ND36 823 aa25.26■■□□□ 1.63
POLR2J3-203ENST00000464525 PLEKHG5O94827 1062 aa25.26■■□□□ 1.63
POLR2J3-203ENST00000464525 HSP90AB2PQ58FF8 381 aa25.26■■□□□ 1.63
POLR2J3-203ENST00000464525 TRIM27P14373 513 aa25.25■■□□□ 1.63
POLR2J3-203ENST00000464525 FTSJ3Q8IY81 847 aaKnown RBP25.25■■□□□ 1.63
POLR2J3-203ENST00000464525 DZIP1LQ8IYY4 767 aaKnown RBP25.25■■□□□ 1.63
POLR2J3-203ENST00000464525 IPO9Q96P70 1041 aaKnown RBP25.25■■□□□ 1.63
POLR2J3-203ENST00000464525 NOB1Q9ULX3 412 aaKnown RBP25.25■■□□□ 1.63
POLR2J3-203ENST00000464525 MAP3K19Q56UN5 1328 aa25.24■■□□□ 1.63
POLR2J3-203ENST00000464525 DCTN1Q14203 1278 aa25.24■■□□□ 1.63
POLR2J3-203ENST00000464525 SULT6B1Q6IMI4 303 aa25.24■■□□□ 1.63
POLR2J3-203ENST00000464525 MVPQ14764 893 aaKnown RBP25.23■■□□□ 1.63
POLR2J3-203ENST00000464525 DDX17Q92841 729 aaKnown RBP25.22■■□□□ 1.63
POLR2J3-203ENST00000464525 PEAK1Q9H792 1746 aa25.22■■□□□ 1.63
POLR2J3-203ENST00000464525 MST1RQ04912 1400 aa25.22■■□□□ 1.63
POLR2J3-203ENST00000464525 ELL2O00472 640 aaPredicted RBP25.22■■□□□ 1.63
POLR2J3-203ENST00000464525 NOP58Q9Y2X3 529 aaKnown RBP25.22■■□□□ 1.63
POLR2J3-203ENST00000464525 LMOD2Q6P5Q4 547 aa25.21■■□□□ 1.63
POLR2J3-203ENST00000464525 MARF1Q9Y4F3 1742 aaKnown RBP25.21■■□□□ 1.63
POLR2J3-203ENST00000464525 TSPYL6Q8N831 410 aa25.21■■□□□ 1.63
POLR2J3-203ENST00000464525 DLG5Q8TDM6 1919 aa25.2■■□□□ 1.63
POLR2J3-203ENST00000464525 ATF7IPQ6VMQ6 1270 aa25.2■■□□□ 1.62
POLR2J3-203ENST00000464525 MSH6P52701 1360 aa25.19■■□□□ 1.62
POLR2J3-203ENST00000464525 XIRP1Q702N8 1843 aaKnown RBP25.19■■□□□ 1.62
POLR2J3-203ENST00000464525 MBIPQ9NS73 344 aa25.19■■□□□ 1.62
POLR2J3-203ENST00000464525 C8orf34Q49A92 452 aa25.18■■□□□ 1.62
POLR2J3-203ENST00000464525 KRT28Q7Z3Y7 464 aa25.18■■□□□ 1.62
POLR2J3-203ENST00000464525 CADPS2Q86UW7 1296 aa25.18■■□□□ 1.62
POLR2J3-203ENST00000464525 NCOA3Q9Y6Q9 1424 aa25.18■■□□□ 1.62
POLR2J3-203ENST00000464525 AMPHP49418 695 aa25.18■■□□□ 1.62
POLR2J3-203ENST00000464525 ITPRIPQ8IWB1 547 aa25.17■■□□□ 1.62
POLR2J3-203ENST00000464525 DCCP43146 1447 aa25.16■■□□□ 1.62
POLR2J3-203ENST00000464525 ZNF853P0CG23 659 aa25.15■■□□□ 1.62
POLR2J3-203ENST00000464525 GNAI1P63096 354 aa25.15■■□□□ 1.62
POLR2J3-203ENST00000464525 VAMP4O75379 141 aa25.15■■□□□ 1.62
POLR2J3-203ENST00000464525 FAM161AQ3B820 660 aa25.15■■□□□ 1.62
POLR2J3-203ENST00000464525 TMEM57Q8N5G2 664 aa25.15■■□□□ 1.62
POLR2J3-203ENST00000464525 IFT57Q9NWB7 429 aa25.15■■□□□ 1.62
POLR2J3-203ENST00000464525 BCL11AQ9H165 835 aa25.14■■□□□ 1.62
POLR2J3-203ENST00000464525 SBNO1A3KN83 1393 aa25.14■■□□□ 1.61
POLR2J3-203ENST00000464525 ZBTB7CA1YPR0 619 aa25.13■■□□□ 1.61
POLR2J3-203ENST00000464525 CALD1Q05682 793 aaKnown RBP25.13■■□□□ 1.61
POLR2J3-203ENST00000464525 AAMPQ13685 434 aa25.13■■□□□ 1.61
POLR2J3-203ENST00000464525 ZBTB47Q9UFB7 747 aaPredicted RBP25.13■■□□□ 1.61
POLR2J3-203ENST00000464525 FLT4P35916 1363 aa25.13■■□□□ 1.61
POLR2J3-203ENST00000464525 ALDH1L2Q3SY69 923 aa25.12■■□□□ 1.61
POLR2J3-203ENST00000464525 C8orf58Q8NAV2 365 aa25.12■■□□□ 1.61
POLR2J3-203ENST00000464525 CFAP44Q96MT7 982 aa25.12■■□□□ 1.61
POLR2J3-203ENST00000464525 KIF1AQ12756 1690 aa25.11■■□□□ 1.61
POLR2J3-203ENST00000464525 MCM10Q7L590 875 aa25.11■■□□□ 1.61
POLR2J3-203ENST00000464525 KIF16BQ96L93 1317 aa25.11■■□□□ 1.61
POLR2J3-203ENST00000464525 LMOD3Q0VAK6 560 aa25.1■■□□□ 1.61
POLR2J3-203ENST00000464525 USP54Q70EL1 1684 aa25.1■■□□□ 1.61
POLR2J3-203ENST00000464525 HOXC9P31274 260 aa25.09■■□□□ 1.61
POLR2J3-203ENST00000464525 RWDD1Q9H446 243 aaPredicted RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms