RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 LMTK2Q8IWU2 1503 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 HECW2Q9P2P5 1572 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 KANK1Q14678 1352 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 SHANK2Q9UPX8 1470 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 GPATCH8Q9UKJ3 1502 aaKnown RBP4.69□□□□□ -1.66
CCNL1-204ENST00000464316 TRIM27P14373 513 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 ALDH1L2Q3SY69 923 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 TAF7LQ5H9L4 462 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 EXOSC9Q06265 439 aaKnown RBP4.69□□□□□ -1.66
CCNL1-204ENST00000464316 ZBTB40Q9NUA8 1239 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 NOB1Q9ULX3 412 aaKnown RBP4.69□□□□□ -1.66
CCNL1-204ENST00000464316 PTPRGP23470 1445 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 CARMIL2Q6F5E8 1435 aa4.69□□□□□ -1.66
CCNL1-204ENST00000464316 AGLP35573 1532 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 ZBTB7CA1YPR0 619 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 DRC7Q8IY82 874 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 IL16Q14005 1332 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 ABCC11Q96J66 1382 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 PRG4Q92954 1404 aaPredicted RBP4.68□□□□□ -1.66
CCNL1-204ENST00000464316 CCDC141Q6ZP82 1450 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 U2SURPO15042 1029 aaKnown RBP4.68□□□□□ -1.66
CCNL1-204ENST00000464316 NRDCO43847 1150 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 SYCP1Q15431 976 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 TEX35Q5T0J7 233 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 TMEM57Q8N5G2 664 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 API5Q9BZZ5 524 aaKnown RBP4.68□□□□□ -1.66
CCNL1-204ENST00000464316 PAXBP1Q9Y5B6 917 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 WDR33Q9C0J8 1336 aaKnown RBP4.68□□□□□ -1.66
CCNL1-204ENST00000464316 SCAF11Q99590 1463 aaKnown RBP4.68□□□□□ -1.66
CCNL1-204ENST00000464316 ABCC1P33527 1531 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 ARHGEF40Q8TER5 1519 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 E9PCH4 1651 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 CCDC183Q5T5S1 534 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 CCDC112Q8NEF3 446 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 SSH1Q8WYL5 1049 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 KNDC1Q76NI1 1749 aa4.68□□□□□ -1.66
CCNL1-204ENST00000464316 SAMD9LQ8IVG5 1584 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 SPDYE4A6NLX3 237 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 ADCY5O95622 1261 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 MTHFSP49914 203 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 FKBP5Q13451 457 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-204ENST00000464316 RNF20Q5VTR2 975 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 BCL2L12Q9HB09 334 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 RBM27Q9P2N5 1060 aaKnown RBP4.67□□□□□ -1.66
CCNL1-204ENST00000464316 DMRT2Q9Y5R5 561 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 HMMRO75330 724 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 KCNJ4P48050 445 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 GPS2Q13227 327 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 KRT222Q8N1A0 295 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 ARHGAP45Q92619 1136 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 ERC2O15083 957 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 TMEM63CQ9P1W3 806 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 USP25Q9UHP3 1055 aa4.67□□□□□ -1.66
CCNL1-204ENST00000464316 PRDM15P57071 1507 aaPredicted RBP4.67□□□□□ -1.66
CCNL1-204ENST00000464316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.67□□□□□ -1.66
CCNL1-204ENST00000464316 PLB1Q6P1J6 1458 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 CRYBG1Q9Y4K1 1723 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 GOLGA6L4A6NEF3 574 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 NEK4P51957 841 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 INTS4Q96HW7 963 aaKnown RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 RBM42Q9BTD8 480 aaKnown RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 SPTLC3Q9NUV7 552 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 TNNQ9UQP3 1299 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 NUP153P49790 1475 aaKnown RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 CYP2E1P05181 493 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 CCDC192P0DO97 292 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 FOXD4L5Q5VV16 416 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 GPT2Q8TD30 523 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 FOXD4L4Q8WXT5 416 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 IFT57Q9NWB7 429 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 XIRP1Q702N8 1843 aaKnown RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 A2MP01023 1474 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 SMTNL1A8MU46 457 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 KIF2AO00139 706 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 KDM4AO75164 1064 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 USP26Q9BXU7 913 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 BCL11BQ9C0K0 894 aaPredicted RBP4.66□□□□□ -1.66
CCNL1-204ENST00000464316 RTEL1-TNFRSF6BF6WH68 1400 aa4.66□□□□□ -1.66
CCNL1-204ENST00000464316 MX1P20591 662 aa4.65□□□□□ -1.66
CCNL1-204ENST00000464316 GTF2E1P29083 439 aaPredicted RBP4.65□□□□□ -1.66
CCNL1-204ENST00000464316 GOLGA6L1Q8N7Z2 621 aa4.65□□□□□ -1.66
CCNL1-204ENST00000464316 TSR2Q969E8 191 aaKnown RBP4.65□□□□□ -1.66
CCNL1-204ENST00000464316 KIF2CQ99661 725 aa4.65□□□□□ -1.66
CCNL1-204ENST00000464316 TTC12Q9H892 705 aaPredicted RBP4.65□□□□□ -1.66
CCNL1-204ENST00000464316 CWC15Q9P013 229 aaKnown RBP4.65□□□□□ -1.66
CCNL1-204ENST00000464316 VIRMAQ69YN4 1812 aaKnown RBP4.65□□□□□ -1.66
CCNL1-204ENST00000464316 ARHGAP31Q2M1Z3 1444 aa4.65□□□□□ -1.66
CCNL1-204ENST00000464316 KIAA1210Q9ULL0 1709 aa4.65□□□□□ -1.66
CCNL1-204ENST00000464316 RIOK3O14730 519 aaKnown RBP4.65□□□□□ -1.67
CCNL1-204ENST00000464316 U2AF2P26368 475 aaKnown RBP eCLIP4.65□□□□□ -1.671e-17■■■□□ 17.6
CCNL1-204ENST00000464316 TMPOP42166 694 aaKnown RBP4.65□□□□□ -1.67
CCNL1-204ENST00000464316 RPAP2Q8IXW5 612 aaPredicted RBP4.65□□□□□ -1.67
CCNL1-204ENST00000464316 CHMP7Q8WUX9 453 aaPredicted RBP4.65□□□□□ -1.67
CCNL1-204ENST00000464316 ARGLU1Q9NWB6 273 aaPredicted RBP4.65□□□□□ -1.67
CCNL1-204ENST00000464316 SYNMO15061 1565 aa4.65□□□□□ -1.67
CCNL1-204ENST00000464316 NEMFO60524 1076 aa4.65□□□□□ -1.67
CCNL1-204ENST00000464316 UBE2HP62256 183 aa4.65□□□□□ -1.67
CCNL1-204ENST00000464316 LMOD3Q0VAK6 560 aa4.65□□□□□ -1.67
CCNL1-204ENST00000464316 DHX8Q14562 1220 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms