RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 USP17L8P0C7I0 530 aa6.71□□□□□ -1.34
SCFD1-204ENST00000463622 NBPF14Q5TI25 921 aa6.71□□□□□ -1.34
SCFD1-204ENST00000463622 SH3BP5LQ7L8J4 393 aa6.71□□□□□ -1.34
SCFD1-204ENST00000463622 SH3RF1Q7Z6J0 888 aa6.71□□□□□ -1.34
SCFD1-204ENST00000463622 NR3C2P08235 984 aa6.7□□□□□ -1.34
SCFD1-204ENST00000463622 ADH1CP00326 375 aa6.7□□□□□ -1.34
SCFD1-204ENST00000463622 GRM5P41594 1212 aa6.7□□□□□ -1.34
SCFD1-204ENST00000463622 WDR4P57081 412 aaKnown RBP6.7□□□□□ -1.34
SCFD1-204ENST00000463622 TRIM46Q7Z4K8 759 aa6.7□□□□□ -1.34
SCFD1-204ENST00000463622 CDK15Q96Q40 435 aa6.7□□□□□ -1.34
SCFD1-204ENST00000463622 FKBPLQ9UIM3 349 aa6.7□□□□□ -1.34
SCFD1-204ENST00000463622 MPNDQ8N594 471 aa6.69□□□□□ -1.34
SCFD1-204ENST00000463622 ZNF608Q9ULD9 1512 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-204ENST00000463622 TIMP2P16035 220 aa6.68□□□□□ -1.34
SCFD1-204ENST00000463622 ZFAND3Q9H8U3 227 aa6.68□□□□□ -1.34
SCFD1-204ENST00000463622 GOPCQ9HD26 462 aa6.68□□□□□ -1.34
SCFD1-204ENST00000463622 IFT140Q96RY7 1462 aa6.68□□□□□ -1.34
SCFD1-204ENST00000463622 ERFEQ4G0M1 354 aa6.68□□□□□ -1.34
SCFD1-204ENST00000463622 VASH1Q7L8A9 365 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-204ENST00000463622 ITPKCQ96DU7 683 aa6.68□□□□□ -1.34
SCFD1-204ENST00000463622 ARHGAP9Q9BRR9 750 aa6.68□□□□□ -1.34
SCFD1-204ENST00000463622 C1QTNF2Q9BXJ5 285 aa6.68□□□□□ -1.34
SCFD1-204ENST00000463622 KLF16Q9BXK1 252 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-204ENST00000463622 FSHRP23945 695 aa6.67□□□□□ -1.34
SCFD1-204ENST00000463622 TRIM47Q96LD4 638 aa6.67□□□□□ -1.34
SCFD1-204ENST00000463622 OCSTAMPQ9BR26 566 aa6.67□□□□□ -1.34
SCFD1-204ENST00000463622 ZIC2O95409 532 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-204ENST00000463622 PDXDC2PQ6P474 469 aa6.66□□□□□ -1.34
SCFD1-204ENST00000463622 GPKOWQ92917 476 aaPredicted RBP eCLIP6.66□□□□□ -1.34
SCFD1-204ENST00000463622 ZFP42Q96MM3 310 aa6.66□□□□□ -1.34
SCFD1-204ENST00000463622 ARAP1Q96P48 1450 aa6.65□□□□□ -1.34
SCFD1-204ENST00000463622 WIZO95785 1651 aa6.65□□□□□ -1.34
SCFD1-204ENST00000463622 NR5A1Q13285 461 aa6.65□□□□□ -1.34
SCFD1-204ENST00000463622 ZBTB33Q86T24 672 aa6.65□□□□□ -1.34
SCFD1-204ENST00000463622 TRIM34Q9BYJ4 488 aa6.65□□□□□ -1.34
SCFD1-204ENST00000463622 SENP2Q9HC62 589 aa6.65□□□□□ -1.34
SCFD1-204ENST00000463622 PURBQ96QR8 312 aaKnown RBP6.64□□□□□ -1.35
SCFD1-204ENST00000463622 RSF1Q96T23 1441 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-204ENST00000463622 TMEM259Q4ZIN3 620 aa6.64□□□□□ -1.35
SCFD1-204ENST00000463622 MRPL14Q6P1L8 145 aaKnown RBP6.64□□□□□ -1.35
SCFD1-204ENST00000463622 TRMT44Q8IYL2 757 aaKnown RBP6.64□□□□□ -1.35
SCFD1-204ENST00000463622 ADAM32Q8TC27 787 aa6.64□□□□□ -1.35
SCFD1-204ENST00000463622 SOBPA7XYQ1 873 aa6.63□□□□□ -1.35
SCFD1-204ENST00000463622 PTK2Q05397 1052 aa6.63□□□□□ -1.35
SCFD1-204ENST00000463622 RAB15P59190 212 aa6.62□□□□□ -1.35
SCFD1-204ENST00000463622 C6orf118Q5T5N4 469 aa6.62□□□□□ -1.35
SCFD1-204ENST00000463622 SLC10A4Q96EP9 437 aa6.62□□□□□ -1.35
SCFD1-204ENST00000463622 MAP4K5Q9Y4K4 846 aa6.62□□□□□ -1.35
SCFD1-204ENST00000463622 AQRO60306 1485 aaKnown RBP eCLIP6.62□□□□□ -1.352e-9■■■■■ 39.4
SCFD1-204ENST00000463622 KIFC2Q96AC6 838 aa6.62□□□□□ -1.35
SCFD1-204ENST00000463622 GJD4Q96KN9 370 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-204ENST00000463622 KCTD15Q96SI1 283 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-204ENST00000463622 TREML4Q6UXN2 200 aa6.61□□□□□ -1.35
SCFD1-204ENST00000463622 CCDC116Q8IYX3 515 aa6.61□□□□□ -1.35
SCFD1-204ENST00000463622 SNRKQ9NRH2 765 aa6.61□□□□□ -1.35
SCFD1-204ENST00000463622 TOPBP1Q92547 1522 aa6.61□□□□□ -1.35
SCFD1-204ENST00000463622 CBLBQ13191 982 aa6.6□□□□□ -1.35
SCFD1-204ENST00000463622 PPP1R26Q5T8A7 1209 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-204ENST00000463622 ZC3H4Q9UPT8 1303 aaKnown RBP6.6□□□□□ -1.35
SCFD1-204ENST00000463622 ABCC8Q09428 1581 aa6.6□□□□□ -1.35
SCFD1-204ENST00000463622 VEGFBP49765 207 aa6.6□□□□□ -1.35
SCFD1-204ENST00000463622 NFX1Q12986 1120 aaKnown RBP6.6□□□□□ -1.35
SCFD1-204ENST00000463622 SCARF1Q14162 830 aa6.6□□□□□ -1.35
SCFD1-204ENST00000463622 LCE2AQ5TA79 106 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-204ENST00000463622 TOP2AP11388 1531 aaKnown RBP6.58□□□□□ -1.36
SCFD1-204ENST00000463622 WFS1O76024 890 aa6.58□□□□□ -1.36
SCFD1-204ENST00000463622 BMP2P12643 396 aa6.58□□□□□ -1.36
SCFD1-204ENST00000463622 INTS6LQ5JSJ4 861 aaKnown RBP6.58□□□□□ -1.36
SCFD1-204ENST00000463622 LCE2CQ5TA81 110 aa6.58□□□□□ -1.36
SCFD1-204ENST00000463622 DZIP3Q86Y13 1208 aaKnown RBP6.58□□□□□ -1.36
SCFD1-204ENST00000463622 PNMA1Q8ND90 353 aa6.58□□□□□ -1.36
SCFD1-204ENST00000463622 TMPRSS4Q9NRS4 437 aa6.58□□□□□ -1.36
SCFD1-204ENST00000463622 GPSM3Q9Y4H4 160 aa6.58□□□□□ -1.36
SCFD1-204ENST00000463622 EMILIN1Q9Y6C2 1016 aa6.58□□□□□ -1.36
SCFD1-204ENST00000463622 TERTO14746 1132 aaKnown RBP6.58□□□□□ -1.36
SCFD1-204ENST00000463622 MEIOBQ8N635 442 aa6.58□□□□□ -1.36
SCFD1-204ENST00000463622 MTMR14Q8NCE2 650 aa6.58□□□□□ -1.36
SCFD1-204ENST00000463622 FBXO45P0C2W1 286 aa6.57□□□□□ -1.36
SCFD1-204ENST00000463622 LINC00528Q8N1L1 170 aa6.57□□□□□ -1.36
SCFD1-204ENST00000463622 CCDC88BA6NC98 1476 aa6.57□□□□□ -1.36
SCFD1-204ENST00000463622 AGBL1Q96MI9 1066 aa6.56□□□□□ -1.36
SCFD1-204ENST00000463622 ZBBXA8MT70 800 aa6.56□□□□□ -1.36
SCFD1-204ENST00000463622 CHMP7Q8WUX9 453 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-204ENST00000463622 PCDHB9Q9Y5E1 797 aa6.56□□□□□ -1.36
SCFD1-204ENST00000463622 TDRD9Q8NDG6 1382 aaKnown RBP6.55□□□□□ -1.36
SCFD1-204ENST00000463622 UPP2O95045 317 aa6.55□□□□□ -1.36
SCFD1-204ENST00000463622 BANK1Q8NDB2 785 aa6.55□□□□□ -1.36
SCFD1-204ENST00000463622 PGPEP1Q9NXJ5 209 aa6.55□□□□□ -1.36
SCFD1-204ENST00000463622 CDV3Q9UKY7 258 aaKnown RBP6.55□□□□□ -1.36
SCFD1-204ENST00000463622 EIF4G3O43432 1585 aaKnown RBP6.55□□□□□ -1.36
SCFD1-204ENST00000463622 ERVH48-1M5A8F1 160 aa6.54□□□□□ -1.36
SCFD1-204ENST00000463622 MAN1A2O60476 641 aa6.54□□□□□ -1.36
SCFD1-204ENST00000463622 GPR37L1O60883 481 aa6.54□□□□□ -1.36
SCFD1-204ENST00000463622 NBPF20Q3BBV1 942 aa6.54□□□□□ -1.36
SCFD1-204ENST00000463622 NXF1Q9UBU9 619 aaKnown RBP6.54□□□□□ -1.36
SCFD1-204ENST00000463622 TARBP1Q13395 1621 aaKnown RBP6.54□□□□□ -1.36
SCFD1-204ENST00000463622 FIGNL2A6NMB9 653 aa6.54□□□□□ -1.36
SCFD1-204ENST00000463622 GIGYF1O75420 1035 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-204ENST00000463622 RELBQ01201 579 aa6.54□□□□□ -1.36
SCFD1-204ENST00000463622 ZNF784Q8NCA9 323 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms