RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 TMF1P82094 1093 aa11.12□□□□□ -0.63
SHQ1-203ENST00000463369 CC2D2BQ6DHV5 1058 aa11.12□□□□□ -0.63
SHQ1-203ENST00000463369 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.12□□□□□ -0.63
SHQ1-203ENST00000463369 NWD1Q149M9 1564 aa11.12□□□□□ -0.63
SHQ1-203ENST00000463369 DISP3Q9P2K9 1392 aa11.12□□□□□ -0.63
SHQ1-203ENST00000463369 MYBBP1AQ9BQG0 1328 aaKnown RBP11.12□□□□□ -0.63
SHQ1-203ENST00000463369 PLIN1O60240 522 aa11.12□□□□□ -0.63
SHQ1-203ENST00000463369 FLIIQ13045 1269 aa11.12□□□□□ -0.63
SHQ1-203ENST00000463369 PRAM1Q96QH2 718 aa11.12□□□□□ -0.63
SHQ1-203ENST00000463369 POGKQ9P215 609 aa11.12□□□□□ -0.63
SHQ1-203ENST00000463369 AMOTL2Q9Y2J4 779 aa11.12□□□□□ -0.63
SHQ1-203ENST00000463369 HSP90AA1P07900 732 aaKnown RBP11.11□□□□□ -0.63
SHQ1-203ENST00000463369 RALBP1Q15311 655 aa11.11□□□□□ -0.63
SHQ1-203ENST00000463369 PTCH1Q13635 1447 aa11.11□□□□□ -0.63
SHQ1-203ENST00000463369 MYOM1P52179 1685 aa11.1□□□□□ -0.63
SHQ1-203ENST00000463369 A6NJR5 290 aa11.1□□□□□ -0.63
SHQ1-203ENST00000463369 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
SHQ1-203ENST00000463369 CENPQQ7L2Z9 268 aaPredicted RBP11.1□□□□□ -0.63
SHQ1-203ENST00000463369 NAP1L5Q96NT1 182 aaPredicted RBP11.1□□□□□ -0.63
SHQ1-203ENST00000463369 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
SHQ1-203ENST00000463369 SEMA3EO15041 775 aa11.1□□□□□ -0.63
SHQ1-203ENST00000463369 KDM4AO75164 1064 aa11.1□□□□□ -0.63
SHQ1-203ENST00000463369 CLCN1P35523 988 aa11.1□□□□□ -0.63
SHQ1-203ENST00000463369 WAPLQ7Z5K2 1190 aa11.1□□□□□ -0.63
SHQ1-203ENST00000463369 ZNF526Q8TF50 670 aaPredicted RBP11.1□□□□□ -0.63
SHQ1-203ENST00000463369 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
SHQ1-203ENST00000463369 PLEKHH1Q9ULM0 1364 aa11.09□□□□□ -0.63
SHQ1-203ENST00000463369 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
SHQ1-203ENST00000463369 CDCA8Q53HL2 280 aa11.09□□□□□ -0.63
SHQ1-203ENST00000463369 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
SHQ1-203ENST00000463369 DCAF8L1A6NGE4 600 aa11.08□□□□□ -0.63
SHQ1-203ENST00000463369 SAFB2Q14151 953 aaKnown RBP eCLIP11.08□□□□□ -0.63
SHQ1-203ENST00000463369 CCDC27Q2M243 656 aa11.08□□□□□ -0.63
SHQ1-203ENST00000463369 PRDM16Q9HAZ2 1276 aa11.08□□□□□ -0.63
SHQ1-203ENST00000463369 RGPD8O14715 1765 aaPredicted RBP11.08□□□□□ -0.64
SHQ1-203ENST00000463369 ADGRB2O60241 1585 aa11.08□□□□□ -0.64
SHQ1-203ENST00000463369 A0A0U1RQG5 324 aaPredicted RBP11.08□□□□□ -0.64
SHQ1-203ENST00000463369 KCNA6P17658 529 aa11.08□□□□□ -0.64
SHQ1-203ENST00000463369 XIRP1Q702N8 1843 aaKnown RBP11.08□□□□□ -0.64
SHQ1-203ENST00000463369 NALCNQ8IZF0 1738 aa11.07□□□□□ -0.64
SHQ1-203ENST00000463369 EVC2Q86UK5 1308 aa11.07□□□□□ -0.64
SHQ1-203ENST00000463369 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
SHQ1-203ENST00000463369 POLA2Q14181 598 aa11.05□□□□□ -0.64
SHQ1-203ENST00000463369 CADPS2Q86UW7 1296 aa11.05□□□□□ -0.64
SHQ1-203ENST00000463369 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
SHQ1-203ENST00000463369 XRCC6P12956 609 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHQ1-203ENST00000463369 ITSN1Q15811 1721 aa11.05□□□□□ -0.64
SHQ1-203ENST00000463369 UNCXA6NJT0 531 aa11.04□□□□□ -0.64
SHQ1-203ENST00000463369 C20orf194Q5TEA3 1177 aa11.04□□□□□ -0.64
SHQ1-203ENST00000463369 NLRP13Q86W25 1043 aa11.04□□□□□ -0.64
SHQ1-203ENST00000463369 FMN2Q9NZ56 1722 aa11.04□□□□□ -0.64
SHQ1-203ENST00000463369 AK7Q96M32 723 aa11.04□□□□□ -0.64
SHQ1-203ENST00000463369 CDK19Q9BWU1 502 aa11.04□□□□□ -0.64
SHQ1-203ENST00000463369 FAM117AQ9C073 453 aa11.04□□□□□ -0.64
SHQ1-203ENST00000463369 FSD2A1L4K1 749 aa11.03□□□□□ -0.64
SHQ1-203ENST00000463369 TESPA1A2RU30 521 aaPredicted RBP11.03□□□□□ -0.64
SHQ1-203ENST00000463369 WASLO00401 505 aaPredicted RBP11.03□□□□□ -0.64
SHQ1-203ENST00000463369 INSRP06213 1382 aa11.03□□□□□ -0.64
SHQ1-203ENST00000463369 TOPAZ1Q8N9V7 1692 aa11.02□□□□□ -0.64
SHQ1-203ENST00000463369 ZNF219Q9P2Y4 722 aaPredicted RBP11.02□□□□□ -0.64
SHQ1-203ENST00000463369 USP19O94966 1318 aa11.02□□□□□ -0.65
SHQ1-203ENST00000463369 GOLGA6L3A6NEY3 463 aa11.02□□□□□ -0.65
SHQ1-203ENST00000463369 SMARCA5O60264 1052 aaPredicted RBP11.02□□□□□ -0.65
SHQ1-203ENST00000463369 CABP2Q9NPB3 220 aa11.02□□□□□ -0.65
SHQ1-203ENST00000463369 AKAP12Q02952 1782 aa11.02□□□□□ -0.65
SHQ1-203ENST00000463369 USP32Q8NFA0 1604 aa11.02□□□□□ -0.65
SHQ1-203ENST00000463369 CDC42BPGQ6DT37 1551 aa11.01□□□□□ -0.65
SHQ1-203ENST00000463369 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
SHQ1-203ENST00000463369 BECN1Q14457 450 aa11.01□□□□□ -0.65
SHQ1-203ENST00000463369 ATAD2Q6PL18 1390 aa11.01□□□□□ -0.65
SHQ1-203ENST00000463369 CCDC97Q96F63 343 aaPredicted RBP11□□□□□ -0.65
SHQ1-203ENST00000463369 ADGRL3Q9HAR2 1447 aa11□□□□□ -0.65
SHQ1-203ENST00000463369 NCOA3Q9Y6Q9 1424 aa11□□□□□ -0.65
SHQ1-203ENST00000463369 RGS3P49796 1198 aa11□□□□□ -0.65
SHQ1-203ENST00000463369 PROSER2Q86WR7 435 aaPredicted RBP11□□□□□ -0.65
SHQ1-203ENST00000463369 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
SHQ1-203ENST00000463369 PARD3Q8TEW0 1356 aa11□□□□□ -0.65
SHQ1-203ENST00000463369 NINLQ9Y2I6 1382 aa11□□□□□ -0.65
SHQ1-203ENST00000463369 IGSF5Q9NSI5 407 aa10.99□□□□□ -0.65
SHQ1-203ENST00000463369 SERPINA10Q9UK55 444 aa10.99□□□□□ -0.65
SHQ1-203ENST00000463369 VIRMAQ69YN4 1812 aaKnown RBP10.99□□□□□ -0.65
SHQ1-203ENST00000463369 BLMP54132 1417 aaPredicted RBP10.98□□□□□ -0.65
SHQ1-203ENST00000463369 ATP7BP35670 1465 aa10.98□□□□□ -0.65
SHQ1-203ENST00000463369 MON2Q7Z3U7 1717 aa10.98□□□□□ -0.65
SHQ1-203ENST00000463369 PANK2Q9BZ23 570 aa10.98□□□□□ -0.65
SHQ1-203ENST00000463369 SLC12A5Q9H2X9 1139 aa10.98□□□□□ -0.65
SHQ1-203ENST00000463369 PANK3Q9H999 370 aa10.98□□□□□ -0.65
SHQ1-203ENST00000463369 PER1O15534 1290 aaPredicted RBP10.97□□□□□ -0.65
SHQ1-203ENST00000463369 NUDT16Q96DE0 195 aaKnown RBP10.97□□□□□ -0.65
SHQ1-203ENST00000463369 RBM33Q96EV2 1170 aaKnown RBP10.97□□□□□ -0.65
SHQ1-203ENST00000463369 SLKQ9H2G2 1235 aaPredicted RBP10.97□□□□□ -0.65
SHQ1-203ENST00000463369 ZNF335Q9H4Z2 1342 aaPredicted RBP10.97□□□□□ -0.65
SHQ1-203ENST00000463369 LRRC7Q96NW7 1537 aa10.97□□□□□ -0.65
SHQ1-203ENST00000463369 PDCL3Q9H2J4 239 aa10.97□□□□□ -0.65
SHQ1-203ENST00000463369 TMEM94Q12767 1356 aa10.96□□□□□ -0.65
SHQ1-203ENST00000463369 PRR36Q9H6K5 1346 aa10.96□□□□□ -0.65
SHQ1-203ENST00000463369 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
SHQ1-203ENST00000463369 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.65
SHQ1-203ENST00000463369 KIF20BQ96Q89 1820 aa10.96□□□□□ -0.66
SHQ1-203ENST00000463369 CD163L1Q9NR16 1453 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms