RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 HAP1P54257 671 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC3-205ENST00000462715 NLRP6P59044 892 aa14.78□□□□□ -0.04
TRAPPC3-205ENST00000462715 CARD14Q9BXL6 1004 aa14.78□□□□□ -0.04
TRAPPC3-205ENST00000462715 NUTM2GQ5VZR2 741 aa14.78□□□□□ -0.04
TRAPPC3-205ENST00000462715 NUTM2BA6NNL0 878 aaPredicted RBP14.77□□□□□ -0.04
TRAPPC3-205ENST00000462715 NUTM2EB1AL46 878 aaPredicted RBP14.77□□□□□ -0.04
TRAPPC3-205ENST00000462715 RRP1P56182 461 aaKnown RBP14.77□□□□□ -0.04
TRAPPC3-205ENST00000462715 NUTM2AQ8IVF1 878 aaPredicted RBP14.77□□□□□ -0.04
TRAPPC3-205ENST00000462715 CGNL1Q0VF96 1302 aa14.77□□□□□ -0.04
TRAPPC3-205ENST00000462715 NME9Q86XW9 330 aa14.77□□□□□ -0.05
TRAPPC3-205ENST00000462715 USP31Q70CQ4 1352 aa14.77□□□□□ -0.05
TRAPPC3-205ENST00000462715 PLEKHG5O94827 1062 aa14.76□□□□□ -0.05
TRAPPC3-205ENST00000462715 RRAGDQ9NQL2 400 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC3-205ENST00000462715 KNSTRNQ9Y448 316 aa14.76□□□□□ -0.05
TRAPPC3-205ENST00000462715 USP19O94966 1318 aa14.76□□□□□ -0.05
TRAPPC3-205ENST00000462715 ABCA3Q99758 1704 aa14.76□□□□□ -0.05
TRAPPC3-205ENST00000462715 PNNQ9H307 717 aaKnown RBP14.76□□□□□ -0.05
TRAPPC3-205ENST00000462715 CABLES1Q8TDN4 633 aa14.75□□□□□ -0.05
TRAPPC3-205ENST00000462715 PHRF1Q9P1Y6 1649 aaKnown RBP14.75□□□□□ -0.05
TRAPPC3-205ENST00000462715 USP54Q70EL1 1684 aa14.75□□□□□ -0.05
TRAPPC3-205ENST00000462715 KIF20BQ96Q89 1820 aa14.75□□□□□ -0.05
TRAPPC3-205ENST00000462715 MEX3CQ5U5Q3 659 aaKnown RBP14.75□□□□□ -0.05
TRAPPC3-205ENST00000462715 COG3Q96JB2 828 aa14.75□□□□□ -0.05
TRAPPC3-205ENST00000462715 CRYBG1Q9Y4K1 1723 aa14.75□□□□□ -0.05
TRAPPC3-205ENST00000462715 LRP6O75581 1613 aa14.74□□□□□ -0.05
TRAPPC3-205ENST00000462715 SLIT3O75094 1523 aa14.74□□□□□ -0.05
TRAPPC3-205ENST00000462715 OVOS2A0A0J9YW53 1432 aa14.74□□□□□ -0.05
TRAPPC3-205ENST00000462715 OVOS2Q6IE36 1432 aa14.74□□□□□ -0.05
TRAPPC3-205ENST00000462715 FYB1O15117 783 aa14.74□□□□□ -0.05
TRAPPC3-205ENST00000462715 PDE3BQ13370 1112 aa14.74□□□□□ -0.05
TRAPPC3-205ENST00000462715 KCNH5Q8NCM2 988 aa14.74□□□□□ -0.05
TRAPPC3-205ENST00000462715 CALD1Q05682 793 aaKnown RBP14.73□□□□□ -0.05
TRAPPC3-205ENST00000462715 NSD2O96028 1365 aa14.73□□□□□ -0.05
TRAPPC3-205ENST00000462715 ADAMTS2O95450 1211 aa14.73□□□□□ -0.05
TRAPPC3-205ENST00000462715 GCP02774 474 aa14.72□□□□□ -0.05
TRAPPC3-205ENST00000462715 GGNBP2Q9H3C7 697 aa14.72□□□□□ -0.05
TRAPPC3-205ENST00000462715 ZRANB1Q9UGI0 708 aa14.72□□□□□ -0.05
TRAPPC3-205ENST00000462715 MARF1Q9Y4F3 1742 aaKnown RBP14.72□□□□□ -0.05
TRAPPC3-205ENST00000462715 TPM2P07951 284 aa14.71□□□□□ -0.05
TRAPPC3-205ENST00000462715 PDCL3Q9H2J4 239 aa14.71□□□□□ -0.05
TRAPPC3-205ENST00000462715 NAP1L5Q96NT1 182 aaPredicted RBP14.71□□□□□ -0.06
TRAPPC3-205ENST00000462715 PER1O15534 1290 aaPredicted RBP14.7□□□□□ -0.06
TRAPPC3-205ENST00000462715 CPDO75976 1380 aa14.69□□□□□ -0.06
TRAPPC3-205ENST00000462715 C8orf37Q96NL8 207 aa14.69□□□□□ -0.06
TRAPPC3-205ENST00000462715 PRDM11Q9NQV5 511 aa14.69□□□□□ -0.06
TRAPPC3-205ENST00000462715 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
TRAPPC3-205ENST00000462715 SOX12O15370 315 aa14.68□□□□□ -0.06
TRAPPC3-205ENST00000462715 ZC3H6P61129 1189 aaKnown RBP14.68□□□□□ -0.06
TRAPPC3-205ENST00000462715 INSRP06213 1382 aa14.68□□□□□ -0.06
TRAPPC3-205ENST00000462715 KIAA0232Q92628 1395 aa14.68□□□□□ -0.06
TRAPPC3-205ENST00000462715 NFAT5O94916 1531 aa14.68□□□□□ -0.06
TRAPPC3-205ENST00000462715 FRAT2O75474 233 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC3-205ENST00000462715 AMER1Q5JTC6 1135 aaPredicted RBP14.68□□□□□ -0.06
TRAPPC3-205ENST00000462715 NGLY1Q96IV0 654 aa14.68□□□□□ -0.06
TRAPPC3-205ENST00000462715 NPC1L1Q9UHC9 1359 aa14.67□□□□□ -0.06
TRAPPC3-205ENST00000462715 EXOC6Q8TAG9 804 aa14.67□□□□□ -0.06
TRAPPC3-205ENST00000462715 COL14A1Q05707 1796 aaKnown RBP14.67□□□□□ -0.06
TRAPPC3-205ENST00000462715 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC3-205ENST00000462715 FAM161AQ3B820 660 aa14.66□□□□□ -0.06
TRAPPC3-205ENST00000462715 MORC1Q86VD1 984 aa14.66□□□□□ -0.06
TRAPPC3-205ENST00000462715 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
TRAPPC3-205ENST00000462715 ISY1Q9ULR0 285 aaKnown RBP14.65□□□□□ -0.06
TRAPPC3-205ENST00000462715 ZBTB7CA1YPR0 619 aa14.65□□□□□ -0.06
TRAPPC3-205ENST00000462715 FAM83GA6ND36 823 aa14.65□□□□□ -0.06
TRAPPC3-205ENST00000462715 ARHGEF25Q86VW2 580 aa14.65□□□□□ -0.06
TRAPPC3-205ENST00000462715 RCAN3Q9UKA8 241 aa14.65□□□□□ -0.06
TRAPPC3-205ENST00000462715 FNBP4Q8N3X1 1017 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC3-205ENST00000462715 AFF2P51816 1311 aa14.64□□□□□ -0.07
TRAPPC3-205ENST00000462715 ABCC6O95255 1503 aa14.64□□□□□ -0.07
TRAPPC3-205ENST00000462715 CC2D1BQ5T0F9 858 aaKnown RBP14.64□□□□□ -0.07
TRAPPC3-205ENST00000462715 PLCH1Q4KWH8 1693 aa14.64□□□□□ -0.07
TRAPPC3-205ENST00000462715 AATKQ6ZMQ8 1374 aa14.64□□□□□ -0.07
TRAPPC3-205ENST00000462715 NWD2Q9ULI1 1742 aa14.64□□□□□ -0.07
TRAPPC3-205ENST00000462715 CHRNA2Q15822 529 aa14.63□□□□□ -0.07
TRAPPC3-205ENST00000462715 SLIT2O94813 1529 aa14.63□□□□□ -0.07
TRAPPC3-205ENST00000462715 LTN1O94822 1766 aa14.63□□□□□ -0.07
TRAPPC3-205ENST00000462715 ZNF772Q68DY9 489 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC3-205ENST00000462715 VIRMAQ69YN4 1812 aaKnown RBP14.62□□□□□ -0.07
TRAPPC3-205ENST00000462715 FSD2A1L4K1 749 aa14.62□□□□□ -0.07
TRAPPC3-205ENST00000462715 MAP7D2Q96T17 732 aa14.62□□□□□ -0.07
TRAPPC3-205ENST00000462715 USP21Q9UK80 565 aa14.62□□□□□ -0.07
TRAPPC3-205ENST00000462715 BTG4Q9NY30 223 aa14.62□□□□□ -0.07
TRAPPC3-205ENST00000462715 RTL1A6NKG5 1358 aa14.61□□□□□ -0.07
TRAPPC3-205ENST00000462715 MAP3K19Q56UN5 1328 aa14.61□□□□□ -0.07
TRAPPC3-205ENST00000462715 TNNT2P45379 298 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC3-205ENST00000462715 LMO7Q8WWI1 1683 aa14.61□□□□□ -0.07
TRAPPC3-205ENST00000462715 KIF24Q5T7B8 1368 aa14.61□□□□□ -0.07
TRAPPC3-205ENST00000462715 AMPHP49418 695 aa14.61□□□□□ -0.07
TRAPPC3-205ENST00000462715 TERF1P54274 439 aa14.61□□□□□ -0.07
TRAPPC3-205ENST00000462715 AAMPQ13685 434 aa14.61□□□□□ -0.07
TRAPPC3-205ENST00000462715 CNGB1Q14028 1251 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC3-205ENST00000462715 RRS1Q15050 365 aaKnown RBP14.6□□□□□ -0.07
TRAPPC3-205ENST00000462715 CENPQQ7L2Z9 268 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC3-205ENST00000462715 UNC5CLQ8IV45 518 aa14.6□□□□□ -0.07
TRAPPC3-205ENST00000462715 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.6□□□□□ -0.07
TRAPPC3-205ENST00000462715 BCL9LQ86UU0 1499 aa14.59□□□□□ -0.07
TRAPPC3-205ENST00000462715 FBLN1P23142 703 aa14.59□□□□□ -0.07
TRAPPC3-205ENST00000462715 COL18A1P39060 1754 aa14.59□□□□□ -0.07
TRAPPC3-205ENST00000462715 BLMP54132 1417 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC3-205ENST00000462715 CAMTA1Q9Y6Y1 1673 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms