RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 HDLBPQ00341 1268 aaKnown RBP4.74□□□□□ -1.65
SMC4-203ENST00000462668 TAGLNQ01995 201 aaKnown RBP4.74□□□□□ -1.65
SMC4-203ENST00000462668 LARP1Q6PKG0 1096 aaKnown RBP4.74□□□□□ -1.65
SMC4-203ENST00000462668 SH3RF1Q7Z6J0 888 aa4.74□□□□□ -1.65
SMC4-203ENST00000462668 KIAA1024Q9UPX6 916 aa4.74□□□□□ -1.65
SMC4-203ENST00000462668 ESPNB1AK53 854 aa4.73□□□□□ -1.65
SMC4-203ENST00000462668 JUNDP17535 347 aa4.73□□□□□ -1.65
SMC4-203ENST00000462668 DPYDQ12882 1025 aa4.73□□□□□ -1.65
SMC4-203ENST00000462668 SF3A1Q15459 793 aaKnown RBP4.73□□□□□ -1.65
SMC4-203ENST00000462668 C6orf229H3BNL8 230 aa4.73□□□□□ -1.65
SMC4-203ENST00000462668 CFHP08603 1231 aa4.73□□□□□ -1.65
SMC4-203ENST00000462668 MMP16P51512 607 aa4.73□□□□□ -1.65
SMC4-203ENST00000462668 ZNF326Q5BKZ1 582 aaKnown RBP4.73□□□□□ -1.65
SMC4-203ENST00000462668 FAM98CQ17RN3 349 aaKnown RBP4.73□□□□□ -1.65
SMC4-203ENST00000462668 ALKBH8Q96BT7 664 aaKnown RBP4.73□□□□□ -1.65
SMC4-203ENST00000462668 CCDC85AQ96PX6 553 aaPredicted RBP4.73□□□□□ -1.65
SMC4-203ENST00000462668 SMAPO00193 183 aa4.73□□□□□ -1.65
SMC4-203ENST00000462668 SF3B2Q13435 895 aaKnown RBP4.73□□□□□ -1.65
SMC4-203ENST00000462668 SLC27A5Q9Y2P5 690 aa4.72□□□□□ -1.65
SMC4-203ENST00000462668 CDK11BP21127 795 aaKnown RBP4.72□□□□□ -1.65
SMC4-203ENST00000462668 TRIM50Q86XT4 487 aa4.72□□□□□ -1.65
SMC4-203ENST00000462668 METTL5Q9NRN9 209 aaKnown RBP4.72□□□□□ -1.65
SMC4-203ENST00000462668 DNAAF2Q9NVR5 837 aaKnown RBP4.72□□□□□ -1.65
SMC4-203ENST00000462668 CDK11AQ9UQ88 783 aaPredicted RBP4.72□□□□□ -1.65
SMC4-203ENST00000462668 DXOO77932 396 aaKnown RBP4.72□□□□□ -1.65
SMC4-203ENST00000462668 RASA1P20936 1047 aa4.72□□□□□ -1.65
SMC4-203ENST00000462668 EML3Q32P44 896 aa4.72□□□□□ -1.65
SMC4-203ENST00000462668 NAALADL2Q58DX5 795 aa4.72□□□□□ -1.65
SMC4-203ENST00000462668 OGFOD1Q8N543 542 aa4.72□□□□□ -1.65
SMC4-203ENST00000462668 SCNN1AP37088 669 aa4.71□□□□□ -1.65
SMC4-203ENST00000462668 TSGA10IPQ3SY00 556 aa4.71□□□□□ -1.65
SMC4-203ENST00000462668 PIK3R5Q8WYR1 880 aa4.71□□□□□ -1.65
SMC4-203ENST00000462668 DNMT3AQ9Y6K1 912 aaPredicted RBP4.71□□□□□ -1.65
SMC4-203ENST00000462668 TREHO43280 583 aa4.71□□□□□ -1.66
SMC4-203ENST00000462668 EVA1BQ9NVM1 165 aa4.71□□□□□ -1.66
SMC4-203ENST00000462668 WASLO00401 505 aaPredicted RBP4.7□□□□□ -1.66
SMC4-203ENST00000462668 ATP1A2P50993 1020 aa4.7□□□□□ -1.66
SMC4-203ENST00000462668 CITED4Q96RK1 184 aa4.7□□□□□ -1.66
SMC4-203ENST00000462668 USB1Q9BQ65 265 aaKnown RBP4.7□□□□□ -1.66
SMC4-203ENST00000462668 P4HBP07237 508 aaKnown RBP4.7□□□□□ -1.66
SMC4-203ENST00000462668 PTK2Q05397 1052 aa4.7□□□□□ -1.66
SMC4-203ENST00000462668 RBL2Q08999 1139 aa4.7□□□□□ -1.66
SMC4-203ENST00000462668 FAM129BQ96TA1 746 aa4.7□□□□□ -1.66
SMC4-203ENST00000462668 NLRP2Q9NX02 1062 aa4.7□□□□□ -1.66
SMC4-203ENST00000462668 SCAMP3O14828 347 aaKnown RBP4.7□□□□□ -1.66
SMC4-203ENST00000462668 RIMBP2O15034 1052 aa4.7□□□□□ -1.66
SMC4-203ENST00000462668 KCNH2Q12809 1159 aa4.7□□□□□ -1.66
SMC4-203ENST00000462668 NOP9Q86U38 636 aaKnown RBP4.7□□□□□ -1.66
SMC4-203ENST00000462668 PTCD1O75127 700 aaKnown RBP4.69□□□□□ -1.66
SMC4-203ENST00000462668 BLOC1S3Q6QNY0 202 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 RNF19BQ6ZMZ0 732 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 DEPDC4Q8N2C3 294 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 ARMC2Q8NEN0 867 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 HELQQ8TDG4 1101 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 C1QTNF2Q9BXJ5 285 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 MAP10Q9P2G4 905 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 DAB2P98082 770 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 STAG2Q8N3U4 1231 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 TGIF2Q9GZN2 237 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 VPS9D1Q9Y2B5 631 aa4.69□□□□□ -1.66
SMC4-203ENST00000462668 POTECB2RU33 542 aa4.68□□□□□ -1.66
SMC4-203ENST00000462668 EPHA4P54764 986 aa4.68□□□□□ -1.66
SMC4-203ENST00000462668 TMC4Q7Z404 712 aa4.68□□□□□ -1.66
SMC4-203ENST00000462668 PCDH10Q9P2E7 1040 aa4.68□□□□□ -1.66
SMC4-203ENST00000462668 SEC13P55735 322 aa4.68□□□□□ -1.66
SMC4-203ENST00000462668 BACH2Q9BYV9 841 aa4.68□□□□□ -1.66
SMC4-203ENST00000462668 FANCCQ00597 558 aa4.68□□□□□ -1.66
SMC4-203ENST00000462668 FKBP4Q02790 459 aaKnown RBP eCLIP4.68□□□□□ -1.66
SMC4-203ENST00000462668 SLFNL1Q499Z3 407 aa4.68□□□□□ -1.66
SMC4-203ENST00000462668 H3BRB1 525 aa4.67□□□□□ -1.66
SMC4-203ENST00000462668 IGFBP4P22692 258 aa4.67□□□□□ -1.66
SMC4-203ENST00000462668 PTPN12Q05209 780 aaKnown RBP4.67□□□□□ -1.66
SMC4-203ENST00000462668 SAMD7Q7Z3H4 446 aa4.67□□□□□ -1.66
SMC4-203ENST00000462668 TMC7Q7Z402 723 aa4.67□□□□□ -1.66
SMC4-203ENST00000462668 GTF3C2Q8WUA4 911 aaPredicted RBP4.67□□□□□ -1.66
SMC4-203ENST00000462668 TUT1Q9H6E5 874 aaKnown RBP4.67□□□□□ -1.66
SMC4-203ENST00000462668 FKBP5Q13451 457 aaPredicted RBP4.67□□□□□ -1.66
SMC4-203ENST00000462668 GIMAP6Q6P9H5 292 aa4.67□□□□□ -1.66
SMC4-203ENST00000462668 TRMT44Q8IYL2 757 aaKnown RBP4.67□□□□□ -1.66
SMC4-203ENST00000462668 SP7Q8TDD2 431 aaPredicted RBP4.67□□□□□ -1.66
SMC4-203ENST00000462668 NOD1Q9Y239 953 aa4.67□□□□□ -1.66
SMC4-203ENST00000462668 FAM160A2Q8N612 972 aaPredicted RBP4.67□□□□□ -1.66
SMC4-203ENST00000462668 PURBQ96QR8 312 aaKnown RBP4.67□□□□□ -1.66
SMC4-203ENST00000462668 ARHGAP33O14559 1287 aa4.66□□□□□ -1.66
SMC4-203ENST00000462668 FOXO3O43524 673 aa4.66□□□□□ -1.66
SMC4-203ENST00000462668 DMRTA1Q5VZB9 504 aa4.66□□□□□ -1.66
SMC4-203ENST00000462668 FOXK2Q01167 660 aa4.66□□□□□ -1.66
SMC4-203ENST00000462668 KCNK17Q96T54 332 aa4.66□□□□□ -1.66
SMC4-203ENST00000462668 KMT5BQ4FZB7 885 aa4.66□□□□□ -1.66
SMC4-203ENST00000462668 DCBLD2Q96PD2 775 aa4.66□□□□□ -1.66
SMC4-203ENST00000462668 FZD6O60353 706 aa4.65□□□□□ -1.66
SMC4-203ENST00000462668 MAPK1P28482 360 aa4.65□□□□□ -1.66
SMC4-203ENST00000462668 EAPPQ56P03 285 aaPredicted RBP4.65□□□□□ -1.66
SMC4-203ENST00000462668 TK2O00142 265 aa4.65□□□□□ -1.66
SMC4-203ENST00000462668 HAX1O00165 279 aa4.65□□□□□ -1.66
SMC4-203ENST00000462668 TNFRSF10BO14763 440 aa4.65□□□□□ -1.66
SMC4-203ENST00000462668 SMARCA5O60264 1052 aaPredicted RBP4.65□□□□□ -1.66
SMC4-203ENST00000462668 ZNF211Q13398 564 aaPredicted RBP4.65□□□□□ -1.66
SMC4-203ENST00000462668 CFHR5Q9BXR6 569 aa4.65□□□□□ -1.66
SMC4-203ENST00000462668 TBX22Q9Y458 520 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms