RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 PRR36Q9H6K5 1346 aa11.91□□□□□ -0.5
DDX39B-215ENST00000462256 CROCC2H7BZ55 1655 aa11.91□□□□□ -0.5
DDX39B-215ENST00000462256 TESK2Q96S53 571 aa11.91□□□□□ -0.5
DDX39B-215ENST00000462256 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
DDX39B-215ENST00000462256 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
DDX39B-215ENST00000462256 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
DDX39B-215ENST00000462256 ADAMTSL3P82987 1691 aa11.9□□□□□ -0.5
DDX39B-215ENST00000462256 ANKARQ7Z5J8 1434 aa11.9□□□□□ -0.5
DDX39B-215ENST00000462256 PPP2R1AP30153 589 aa11.9□□□□□ -0.5
DDX39B-215ENST00000462256 PTCH1Q13635 1447 aa11.9□□□□□ -0.51
DDX39B-215ENST00000462256 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-215ENST00000462256 STARD3NLO95772 234 aa11.89□□□□□ -0.51
DDX39B-215ENST00000462256 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
DDX39B-215ENST00000462256 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
DDX39B-215ENST00000462256 TFCP2L1Q9NZI6 479 aa11.89□□□□□ -0.51
DDX39B-215ENST00000462256 ALKQ9UM73 1620 aa11.89□□□□□ -0.51
DDX39B-215ENST00000462256 PREX1Q8TCU6 1659 aa11.89□□□□□ -0.51
DDX39B-215ENST00000462256 A0A1W2PP64 1363 aa11.89□□□□□ -0.51
DDX39B-215ENST00000462256 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-215ENST00000462256 C3P01024 1663 aa11.89□□□□□ -0.51
DDX39B-215ENST00000462256 NSD2O96028 1365 aa11.88□□□□□ -0.51
DDX39B-215ENST00000462256 FLT4P35916 1363 aa11.88□□□□□ -0.51
DDX39B-215ENST00000462256 CLTCL1P53675 1640 aa11.88□□□□□ -0.51
DDX39B-215ENST00000462256 HOXC9P31274 260 aa11.88□□□□□ -0.51
DDX39B-215ENST00000462256 ARHGAP23Q9P227 1491 aa11.88□□□□□ -0.51
DDX39B-215ENST00000462256 FAM83GA6ND36 823 aa11.88□□□□□ -0.51
DDX39B-215ENST00000462256 POLD1P28340 1107 aa11.88□□□□□ -0.51
DDX39B-215ENST00000462256 FTSJ3Q8IY81 847 aaKnown RBP11.88□□□□□ -0.51
DDX39B-215ENST00000462256 EDC4Q6P2E9 1401 aaKnown RBP11.88□□□□□ -0.51
DDX39B-215ENST00000462256 PNISRQ8TF01 805 aaKnown RBP11.88□□□□□ -0.51
DDX39B-215ENST00000462256 SLIT1O75093 1534 aa11.88□□□□□ -0.51
DDX39B-215ENST00000462256 RUNDC1Q96C34 613 aa11.87□□□□□ -0.51
DDX39B-215ENST00000462256 APAF1O14727 1248 aa11.87□□□□□ -0.51
DDX39B-215ENST00000462256 UBE2Q2Q8WVN8 375 aa11.87□□□□□ -0.51
DDX39B-215ENST00000462256 TRIM37O94972 964 aa11.87□□□□□ -0.51
DDX39B-215ENST00000462256 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
DDX39B-215ENST00000462256 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
DDX39B-215ENST00000462256 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
DDX39B-215ENST00000462256 ZPR1O75312 459 aa11.86□□□□□ -0.51
DDX39B-215ENST00000462256 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
DDX39B-215ENST00000462256 GNAT3A8MTJ3 354 aa11.86□□□□□ -0.51
DDX39B-215ENST00000462256 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
DDX39B-215ENST00000462256 FRAT1Q92837 279 aaPredicted RBP11.86□□□□□ -0.51
DDX39B-215ENST00000462256 DCCP43146 1447 aa11.86□□□□□ -0.51
DDX39B-215ENST00000462256 FCHSD2O94868 740 aa11.86□□□□□ -0.51
DDX39B-215ENST00000462256 FAM182BQ5T319 152 aa11.86□□□□□ -0.51
DDX39B-215ENST00000462256 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
DDX39B-215ENST00000462256 E9PCH4 1651 aa11.85□□□□□ -0.51
DDX39B-215ENST00000462256 DDX58O95786 925 aaKnown RBP11.85□□□□□ -0.51
DDX39B-215ENST00000462256 ARHGEF25Q86VW2 580 aa11.85□□□□□ -0.51
DDX39B-215ENST00000462256 CHMP3Q9Y3E7 222 aa11.85□□□□□ -0.51
DDX39B-215ENST00000462256 MYO3AQ8NEV4 1616 aa11.85□□□□□ -0.51
DDX39B-215ENST00000462256 CARD10Q9BWT7 1032 aa11.85□□□□□ -0.51
DDX39B-215ENST00000462256 LRRC7Q96NW7 1537 aa11.85□□□□□ -0.51
DDX39B-215ENST00000462256 SPHKAPQ2M3C7 1700 aa11.84□□□□□ -0.51
DDX39B-215ENST00000462256 PTPRUQ92729 1446 aa11.84□□□□□ -0.51
DDX39B-215ENST00000462256 FAM177BA6PVY3 158 aa11.84□□□□□ -0.51
DDX39B-215ENST00000462256 BTBD11A6QL63 1104 aa11.84□□□□□ -0.51
DDX39B-215ENST00000462256 KIF6Q6ZMV9 814 aa11.84□□□□□ -0.51
DDX39B-215ENST00000462256 POLKQ9UBT6 870 aa11.84□□□□□ -0.51
DDX39B-215ENST00000462256 GNAI1P63096 354 aa11.83□□□□□ -0.51
DDX39B-215ENST00000462256 HDAC5Q9UQL6 1122 aa11.83□□□□□ -0.51
DDX39B-215ENST00000462256 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
DDX39B-215ENST00000462256 PCDH11YQ9BZA8 1340 aa11.83□□□□□ -0.52
DDX39B-215ENST00000462256 PHF14O94880 888 aa11.83□□□□□ -0.52
DDX39B-215ENST00000462256 MED14O60244 1454 aa11.83□□□□□ -0.52
DDX39B-215ENST00000462256 SBNO2Q9Y2G9 1366 aa11.83□□□□□ -0.52
DDX39B-215ENST00000462256 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
DDX39B-215ENST00000462256 OS9Q13438 667 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-215ENST00000462256 THRAP3Q9Y2W1 955 aaKnown RBP11.83□□□□□ -0.52
DDX39B-215ENST00000462256 RFC4P35249 363 aa11.83□□□□□ -0.52
DDX39B-215ENST00000462256 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
DDX39B-215ENST00000462256 WDR17Q8IZU2 1322 aa11.82□□□□□ -0.52
DDX39B-215ENST00000462256 VPS72Q15906 364 aa11.82□□□□□ -0.52
DDX39B-215ENST00000462256 CCNL1Q9UK58 526 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-215ENST00000462256 ATP6V1AP38606 617 aa11.82□□□□□ -0.52
DDX39B-215ENST00000462256 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
DDX39B-215ENST00000462256 MROH2AA6NES4 1674 aa11.82□□□□□ -0.52
DDX39B-215ENST00000462256 EIF4A2Q14240 407 aaKnown RBP11.82□□□□□ -0.52
DDX39B-215ENST00000462256 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
DDX39B-215ENST00000462256 IPO8O15397 1037 aaKnown RBP11.81□□□□□ -0.52
DDX39B-215ENST00000462256 MS4A1P11836 297 aa11.81□□□□□ -0.52
DDX39B-215ENST00000462256 EYA1Q99502 592 aa11.81□□□□□ -0.52
DDX39B-215ENST00000462256 USP6P35125 1406 aa11.81□□□□□ -0.52
DDX39B-215ENST00000462256 TEX13AQ9BXU3 409 aaPredicted RBP11.81□□□□□ -0.52
DDX39B-215ENST00000462256 CCER2I3L3R5 266 aa11.8□□□□□ -0.52
DDX39B-215ENST00000462256 CARD14Q9BXL6 1004 aa11.8□□□□□ -0.52
DDX39B-215ENST00000462256 CHMP4BQ9H444 224 aaKnown RBP11.8□□□□□ -0.52
DDX39B-215ENST00000462256 HSP90B1P14625 803 aaKnown RBP11.8□□□□□ -0.52
DDX39B-215ENST00000462256 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
DDX39B-215ENST00000462256 ZNF652Q9Y2D9 606 aa11.8□□□□□ -0.52
DDX39B-215ENST00000462256 POLR3AO14802 1390 aaPredicted RBP11.8□□□□□ -0.52
DDX39B-215ENST00000462256 DIP2AQ14689 1571 aa11.8□□□□□ -0.52
DDX39B-215ENST00000462256 VWDEQ8N2E2 1590 aa11.8□□□□□ -0.52
DDX39B-215ENST00000462256 DCAF5Q96JK2 942 aa11.79□□□□□ -0.52
DDX39B-215ENST00000462256 RBM19Q9Y4C8 960 aaKnown RBP11.79□□□□□ -0.52
DDX39B-215ENST00000462256 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
DDX39B-215ENST00000462256 MST1RQ04912 1400 aa11.79□□□□□ -0.52
DDX39B-215ENST00000462256 NEXMIFQ5QGS0 1516 aa11.79□□□□□ -0.52
DDX39B-215ENST00000462256 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms