RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 CABP2Q9NPB3 220 aa15.76■□□□□ 0.11
CBX3-205ENST00000462165 AKAP12Q02952 1782 aa15.76■□□□□ 0.11
CBX3-205ENST00000462165 NLRP6P59044 892 aa15.75■□□□□ 0.11
CBX3-205ENST00000462165 PIK3C2AO00443 1686 aa15.75■□□□□ 0.11
CBX3-205ENST00000462165 DDB1Q16531 1140 aa15.74■□□□□ 0.11
CBX3-205ENST00000462165 RGPD5Q99666 1765 aa15.73■□□□□ 0.11
CBX3-205ENST00000462165 CABP1Q9NZU7 370 aa15.73■□□□□ 0.11
CBX3-205ENST00000462165 BCL9O00512 1426 aa15.73■□□□□ 0.11
CBX3-205ENST00000462165 ZBTB7CA1YPR0 619 aa15.72■□□□□ 0.11
CBX3-205ENST00000462165 DCAF8L1A6NGE4 600 aa15.72■□□□□ 0.11
CBX3-205ENST00000462165 TOM1L2Q6ZVM7 507 aa15.72■□□□□ 0.11
CBX3-205ENST00000462165 BCL11BQ9C0K0 894 aaPredicted RBP15.72■□□□□ 0.11
CBX3-205ENST00000462165 ANO8Q9HCE9 1232 aaPredicted RBP15.72■□□□□ 0.11
CBX3-205ENST00000462165 WDR17Q8IZU2 1322 aa15.71■□□□□ 0.11
CBX3-205ENST00000462165 PTF1AQ7RTS3 328 aa15.7■□□□□ 0.1
CBX3-205ENST00000462165 CDCA7Q9BWT1 371 aaPredicted RBP15.7■□□□□ 0.1
CBX3-205ENST00000462165 AXIN2Q9Y2T1 843 aa15.7■□□□□ 0.1
CBX3-205ENST00000462165 UTRNP46939 3433 aa15.7■□□□□ 0.1
CBX3-205ENST00000462165 CPSF1Q10570 1443 aaKnown RBP15.69■□□□□ 0.1
CBX3-205ENST00000462165 TRPM1Q7Z4N2 1603 aa15.69■□□□□ 0.1
CBX3-205ENST00000462165 PROM2Q8N271 834 aa15.69■□□□□ 0.1
CBX3-205ENST00000462165 MARCH10Q8NA82 808 aaPredicted RBP15.69■□□□□ 0.1
CBX3-205ENST00000462165 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
CBX3-205ENST00000462165 ARHGEF25Q86VW2 580 aa15.68■□□□□ 0.1
CBX3-205ENST00000462165 MYOM1P52179 1685 aa15.67■□□□□ 0.1
CBX3-205ENST00000462165 CARD10Q9BWT7 1032 aa15.67■□□□□ 0.1
CBX3-205ENST00000462165 EVC2Q86UK5 1308 aa15.67■□□□□ 0.1
CBX3-205ENST00000462165 KCNH5Q8NCM2 988 aa15.66■□□□□ 0.1
CBX3-205ENST00000462165 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
CBX3-205ENST00000462165 PDGFDQ9GZP0 370 aaPredicted RBP15.66■□□□□ 0.1
CBX3-205ENST00000462165 TTC21BQ7Z4L5 1316 aa15.66■□□□□ 0.1
CBX3-205ENST00000462165 NFAT5O94916 1531 aa15.64■□□□□ 0.09
CBX3-205ENST00000462165 ABCC6O95255 1503 aa15.64■□□□□ 0.09
CBX3-205ENST00000462165 ZBTB7AO95365 584 aa15.64■□□□□ 0.09
CBX3-205ENST00000462165 PTGER2P43116 358 aa15.64■□□□□ 0.09
CBX3-205ENST00000462165 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
CBX3-205ENST00000462165 TXNRD1Q16881 649 aa15.64■□□□□ 0.09
CBX3-205ENST00000462165 TTC21AQ8NDW8 1320 aa15.64■□□□□ 0.09
CBX3-205ENST00000462165 NHSQ6T4R5 1651 aa15.63■□□□□ 0.09
CBX3-205ENST00000462165 CCDC7Q96M83 1385 aa15.63■□□□□ 0.09
CBX3-205ENST00000462165 EXOC5O00471 708 aa15.63■□□□□ 0.09
CBX3-205ENST00000462165 MON2Q7Z3U7 1717 aa15.63■□□□□ 0.09
CBX3-205ENST00000462165 TNS2Q63HR2 1409 aa15.62■□□□□ 0.09
CBX3-205ENST00000462165 CSB-PGBD3P0DP91 1061 aa15.62■□□□□ 0.09
CBX3-205ENST00000462165 SLC15A2Q16348 729 aa15.62■□□□□ 0.09
CBX3-205ENST00000462165 STK32BQ9NY57 414 aa15.62■□□□□ 0.09
CBX3-205ENST00000462165 CHD4Q14839 1912 aa15.62■□□□□ 0.09
CBX3-205ENST00000462165 USP54Q70EL1 1684 aa15.61■□□□□ 0.09
CBX3-205ENST00000462165 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
CBX3-205ENST00000462165 SOX12O15370 315 aa15.6■□□□□ 0.09
CBX3-205ENST00000462165 L3MBTL2Q969R5 705 aa15.6■□□□□ 0.09
CBX3-205ENST00000462165 PAPPAQ13219 1627 aa15.59■□□□□ 0.09
CBX3-205ENST00000462165 SGIP1Q9BQI5 828 aa15.59■□□□□ 0.09
CBX3-205ENST00000462165 SYT17Q9BSW7 474 aa15.59■□□□□ 0.09
CBX3-205ENST00000462165 MTFR1LQ9H019 292 aa15.59■□□□□ 0.09
CBX3-205ENST00000462165 KTN1Q86UP2 1357 aaKnown RBP15.59■□□□□ 0.09
CBX3-205ENST00000462165 LTN1O94822 1766 aa15.59■□□□□ 0.09
CBX3-205ENST00000462165 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
CBX3-205ENST00000462165 FHDC1Q9C0D6 1143 aaPredicted RBP15.58■□□□□ 0.08
CBX3-205ENST00000462165 BTAF1O14981 1849 aa15.58■□□□□ 0.08
CBX3-205ENST00000462165 ROCK2O75116 1388 aaKnown RBP15.57■□□□□ 0.08
CBX3-205ENST00000462165 USP31Q70CQ4 1352 aa15.57■□□□□ 0.08
CBX3-205ENST00000462165 ZNF784Q8NCA9 323 aaPredicted RBP15.56■□□□□ 0.08
CBX3-205ENST00000462165 ERBB3P21860 1342 aa15.56■□□□□ 0.08
CBX3-205ENST00000462165 KAT6BQ8WYB5 2073 aa15.56■□□□□ 0.08
CBX3-205ENST00000462165 GOLGB1Q14789 3259 aaKnown RBP15.55■□□□□ 0.08
CBX3-205ENST00000462165 QSER1Q2KHR3 1735 aa15.54■□□□□ 0.08
CBX3-205ENST00000462165 ACSBG1Q96GR2 724 aa15.54■□□□□ 0.08
CBX3-205ENST00000462165 MAP3K5Q99683 1374 aa15.53■□□□□ 0.08
CBX3-205ENST00000462165 SBNO2Q9Y2G9 1366 aa15.53■□□□□ 0.08
CBX3-205ENST00000462165 IL2RBP14784 551 aa15.53■□□□□ 0.08
CBX3-205ENST00000462165 CD163L1Q9NR16 1453 aa15.52■□□□□ 0.08
CBX3-205ENST00000462165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.08
CBX3-205ENST00000462165 ARXQ96QS3 562 aa15.52■□□□□ 0.08
CBX3-205ENST00000462165 NLRP2Q9NX02 1062 aa15.52■□□□□ 0.08
CBX3-205ENST00000462165 COL24A1Q17RW2 1714 aa15.51■□□□□ 0.07
CBX3-205ENST00000462165 SIN3AQ96ST3 1273 aa15.51■□□□□ 0.07
CBX3-205ENST00000462165 NME9Q86XW9 330 aa15.5■□□□□ 0.07
CBX3-205ENST00000462165 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
CBX3-205ENST00000462165 FAM208AQ9UK61 1670 aaKnown RBP15.5■□□□□ 0.07
CBX3-205ENST00000462165 ZNF827Q17R98 1081 aa15.49■□□□□ 0.07
CBX3-205ENST00000462165 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
CBX3-205ENST00000462165 LRRC4BQ9NT99 713 aa15.49■□□□□ 0.07
CBX3-205ENST00000462165 TUBGCP6Q96RT7 1819 aa15.48■□□□□ 0.07
CBX3-205ENST00000462165 EDC4Q6P2E9 1401 aaKnown RBP15.48■□□□□ 0.07
CBX3-205ENST00000462165 SLC16A10Q8TF71 515 aa15.47■□□□□ 0.07
CBX3-205ENST00000462165 AKT1S1Q96B36 256 aa15.47■□□□□ 0.07
CBX3-205ENST00000462165 LY75O60449 1722 aa15.46■□□□□ 0.07
CBX3-205ENST00000462165 SLC27A3Q5K4L6 730 aa15.46■□□□□ 0.07
CBX3-205ENST00000462165 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.07
CBX3-205ENST00000462165 NEUROD1Q13562 356 aa15.45■□□□□ 0.06
CBX3-205ENST00000462165 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
CBX3-205ENST00000462165 DOT1LQ8TEK3 1739 aa15.44■□□□□ 0.06
CBX3-205ENST00000462165 SHANK3Q9BYB0 1731 aa15.44■□□□□ 0.06
CBX3-205ENST00000462165 C1QTNF8P60827 252 aa15.44■□□□□ 0.06
CBX3-205ENST00000462165 IP6K1Q92551 441 aa15.44■□□□□ 0.06
CBX3-205ENST00000462165 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
CBX3-205ENST00000462165 SLC12A5Q9H2X9 1139 aa15.44■□□□□ 0.06
CBX3-205ENST00000462165 TERF2IPQ9NYB0 399 aa15.43■□□□□ 0.06
CBX3-205ENST00000462165 A0A1W2PP64 1363 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms