RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 RAB11FIP3O75154 756 aa10.32□□□□□ -0.76
LRCH3-210ENST00000461674 GRIPAP1Q4V328 841 aa10.32□□□□□ -0.76
LRCH3-210ENST00000461674 EGFLAMQ63HQ2 1017 aa10.32□□□□□ -0.76
LRCH3-210ENST00000461674 LARGE2Q8N3Y3 721 aa10.32□□□□□ -0.76
LRCH3-210ENST00000461674 CCSER2Q9H7U1 834 aa10.32□□□□□ -0.76
LRCH3-210ENST00000461674 DNAAF2Q9NVR5 837 aaKnown RBP10.32□□□□□ -0.76
LRCH3-210ENST00000461674 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
LRCH3-210ENST00000461674 CLDN10P78369 228 aa10.31□□□□□ -0.76
LRCH3-210ENST00000461674 FKBP4Q02790 459 aaKnown RBP eCLIP10.31□□□□□ -0.76
LRCH3-210ENST00000461674 DESI1Q6ICB0 168 aa10.31□□□□□ -0.76
LRCH3-210ENST00000461674 SIX5Q8N196 739 aa10.31□□□□□ -0.76
LRCH3-210ENST00000461674 TMEM87AQ8NBN3 555 aa10.31□□□□□ -0.76
LRCH3-210ENST00000461674 GTF3C2Q8WUA4 911 aaPredicted RBP10.31□□□□□ -0.76
LRCH3-210ENST00000461674 PSMD1Q99460 953 aa10.31□□□□□ -0.76
LRCH3-210ENST00000461674 CEP126Q9P2H0 1117 aa10.31□□□□□ -0.76
LRCH3-210ENST00000461674 TBX22Q9Y458 520 aa10.31□□□□□ -0.76
LRCH3-210ENST00000461674 COL9A1P20849 921 aa10.3□□□□□ -0.76
LRCH3-210ENST00000461674 FGD1P98174 961 aa10.3□□□□□ -0.76
LRCH3-210ENST00000461674 KCNH2Q12809 1159 aa10.3□□□□□ -0.76
LRCH3-210ENST00000461674 MAP7D1Q3KQU3 841 aa10.3□□□□□ -0.76
LRCH3-210ENST00000461674 FKBPLQ9UIM3 349 aa10.3□□□□□ -0.76
LRCH3-210ENST00000461674 ATMINO43313 823 aaPredicted RBP10.29□□□□□ -0.76
LRCH3-210ENST00000461674 SLC10A3P09131 477 aa10.29□□□□□ -0.76
LRCH3-210ENST00000461674 PHTF2Q8N3S3 785 aa10.29□□□□□ -0.76
LRCH3-210ENST00000461674 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
LRCH3-210ENST00000461674 PRIMPOLQ96LW4 560 aa10.29□□□□□ -0.76
LRCH3-210ENST00000461674 CAPN10Q9HC96 672 aa10.29□□□□□ -0.76
LRCH3-210ENST00000461674 METTL14Q9HCE5 456 aaKnown RBP10.29□□□□□ -0.76
LRCH3-210ENST00000461674 CHIC2Q9UKJ5 165 aa10.29□□□□□ -0.76
LRCH3-210ENST00000461674 DNMT3AQ9Y6K1 912 aaPredicted RBP10.29□□□□□ -0.76
LRCH3-210ENST00000461674 PLEKHD1A6NEE1 506 aa10.28□□□□□ -0.76
LRCH3-210ENST00000461674 DKK1O94907 266 aa10.28□□□□□ -0.76
LRCH3-210ENST00000461674 FMNL1O95466 1100 aaPredicted RBP10.28□□□□□ -0.76
LRCH3-210ENST00000461674 GNL2Q13823 731 aaKnown RBP10.28□□□□□ -0.76
LRCH3-210ENST00000461674 PACS2Q86VP3 889 aa10.28□□□□□ -0.76
LRCH3-210ENST00000461674 RNF34Q969K3 372 aa10.28□□□□□ -0.76
LRCH3-210ENST00000461674 GMLQ99445 158 aa10.28□□□□□ -0.76
LRCH3-210ENST00000461674 RBCK1Q9BYM8 510 aa10.28□□□□□ -0.76
LRCH3-210ENST00000461674 IQSEC3Q9UPP2 1182 aaPredicted RBP10.28□□□□□ -0.76
LRCH3-210ENST00000461674 PPME1Q9Y570 386 aa10.28□□□□□ -0.76
LRCH3-210ENST00000461674 C19orf67A6NJJ6 358 aa10.27□□□□□ -0.77
LRCH3-210ENST00000461674 TRIM6-TRIM34B2RNG4 842 aa10.27□□□□□ -0.77
LRCH3-210ENST00000461674 SEC13P55735 322 aa10.27□□□□□ -0.77
LRCH3-210ENST00000461674 MCCD1P59942 119 aaPredicted RBP10.27□□□□□ -0.77
LRCH3-210ENST00000461674 FANCCQ00597 558 aa10.27□□□□□ -0.77
LRCH3-210ENST00000461674 FMR1Q06787 632 aaKnown RBP eCLIP10.27□□□□□ -0.77
LRCH3-210ENST00000461674 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
LRCH3-210ENST00000461674 RETREG3Q86VR2 466 aa10.27□□□□□ -0.77
LRCH3-210ENST00000461674 NOD1Q9Y239 953 aa10.27□□□□□ -0.77
LRCH3-210ENST00000461674 XPCQ01831 940 aaPredicted RBP10.26□□□□□ -0.77
LRCH3-210ENST00000461674 PTPROQ16827 1216 aa10.26□□□□□ -0.77
LRCH3-210ENST00000461674 TRAF7Q6Q0C0 670 aa10.26□□□□□ -0.77
LRCH3-210ENST00000461674 C3orf67Q6ZVT6 689 aa10.26□□□□□ -0.77
LRCH3-210ENST00000461674 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
LRCH3-210ENST00000461674 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
LRCH3-210ENST00000461674 IGBP1P78318 339 aa10.25□□□□□ -0.77
LRCH3-210ENST00000461674 LYPD8Q6UX82 237 aa10.25□□□□□ -0.77
LRCH3-210ENST00000461674 TMC7Q7Z402 723 aa10.25□□□□□ -0.77
LRCH3-210ENST00000461674 KCNB2Q92953 911 aa10.25□□□□□ -0.77
LRCH3-210ENST00000461674 SPACA7Q96KW9 195 aa10.25□□□□□ -0.77
LRCH3-210ENST00000461674 PIF1Q9H611 641 aa10.25□□□□□ -0.77
LRCH3-210ENST00000461674 SEPT3Q9UH03 358 aa10.25□□□□□ -0.77
LRCH3-210ENST00000461674 hCG_2014768A0A024R1R8 64 aa10.24□□□□□ -0.77
LRCH3-210ENST00000461674 FUT2Q10981 343 aa10.24□□□□□ -0.77
LRCH3-210ENST00000461674 SOGA3Q5TF21 947 aa10.24□□□□□ -0.77
LRCH3-210ENST00000461674 NLGN1Q8N2Q7 840 aa10.24□□□□□ -0.77
LRCH3-210ENST00000461674 KIAA1024Q9UPX6 916 aa10.24□□□□□ -0.77
LRCH3-210ENST00000461674 RBM19Q9Y4C8 960 aaKnown RBP10.24□□□□□ -0.77
LRCH3-210ENST00000461674 RIPOR2Q9Y4F9 1068 aa10.24□□□□□ -0.77
LRCH3-210ENST00000461674 TREHO43280 583 aa10.23□□□□□ -0.77
LRCH3-210ENST00000461674 PRPF40AO75400 957 aaKnown RBP10.23□□□□□ -0.77
LRCH3-210ENST00000461674 RBL2Q08999 1139 aa10.23□□□□□ -0.77
LRCH3-210ENST00000461674 CCDC181Q5TID7 509 aa10.23□□□□□ -0.77
LRCH3-210ENST00000461674 CHRDL2Q6WN34 429 aa10.23□□□□□ -0.77
LRCH3-210ENST00000461674 TMC4Q7Z404 712 aa10.23□□□□□ -0.77
LRCH3-210ENST00000461674 UBE2Q2Q8WVN8 375 aa10.23□□□□□ -0.77
LRCH3-210ENST00000461674 MTMR3Q13615 1198 aa10.22□□□□□ -0.77
LRCH3-210ENST00000461674 PMFBP1Q8TBY8 1022 aa10.22□□□□□ -0.77
LRCH3-210ENST00000461674 BRINP2Q9C0B6 783 aa10.22□□□□□ -0.77
LRCH3-210ENST00000461674 ACBD3Q9H3P7 528 aa10.22□□□□□ -0.77
LRCH3-210ENST00000461674 PARP2Q9UGN5 583 aa10.22□□□□□ -0.77
LRCH3-210ENST00000461674 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
LRCH3-210ENST00000461674 SMAPO00193 183 aa10.21□□□□□ -0.77
LRCH3-210ENST00000461674 ZBTB7BO15156 539 aaPredicted RBP10.21□□□□□ -0.77
LRCH3-210ENST00000461674 SORBS3O60504 671 aa10.21□□□□□ -0.77
LRCH3-210ENST00000461674 PTCD1O75127 700 aaKnown RBP10.21□□□□□ -0.77
LRCH3-210ENST00000461674 DNAJA1P31689 397 aaKnown RBP10.21□□□□□ -0.77
LRCH3-210ENST00000461674 ZNF76P36508 570 aa10.21□□□□□ -0.77
LRCH3-210ENST00000461674 ZSWIM4Q9H7M6 989 aa10.21□□□□□ -0.77
LRCH3-210ENST00000461674 BCL2L12Q9HB09 334 aa10.21□□□□□ -0.77
LRCH3-210ENST00000461674 LDHBP07195 334 aaKnown RBP10.2□□□□□ -0.78
LRCH3-210ENST00000461674 IBSPP21815 317 aaPredicted RBP10.2□□□□□ -0.78
LRCH3-210ENST00000461674 HELQQ8TDG4 1101 aa10.2□□□□□ -0.78
LRCH3-210ENST00000461674 FAM161BQ96MY7 647 aa10.2□□□□□ -0.78
LRCH3-210ENST00000461674 MKNK1Q9BUB5 465 aa10.2□□□□□ -0.78
LRCH3-210ENST00000461674 GPSM3Q9Y4H4 160 aa10.2□□□□□ -0.78
LRCH3-210ENST00000461674 LOC102724159A0A0B4J2E5 919 aa10.19□□□□□ -0.78
LRCH3-210ENST00000461674 NPR3P17342 541 aa10.19□□□□□ -0.78
LRCH3-210ENST00000461674 ATP6V1AP38606 617 aa10.19□□□□□ -0.78
LRCH3-210ENST00000461674 DAB2P98082 770 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms