RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 MYO3AQ8NEV4 1616 aa9.24□□□□□ -0.93
SPTA1-202ENST00000461624 Q3C1V9 767 aa9.24□□□□□ -0.93
SPTA1-202ENST00000461624 FAM160A2Q8N612 972 aaPredicted RBP9.24□□□□□ -0.93
SPTA1-202ENST00000461624 FCF1Q9Y324 198 aaKnown RBP9.24□□□□□ -0.93
SPTA1-202ENST00000461624 CNTLNQ9NXG0 1405 aa9.22□□□□□ -0.93
SPTA1-202ENST00000461624 MYO5CQ9NQX4 1742 aa9.22□□□□□ -0.93
SPTA1-202ENST00000461624 CPS1P31327 1500 aa9.22□□□□□ -0.93
SPTA1-202ENST00000461624 CEP170BQ9Y4F5 1589 aaPredicted RBP9.22□□□□□ -0.93
SPTA1-202ENST00000461624 USP46P62068 366 aa9.22□□□□□ -0.93
SPTA1-202ENST00000461624 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
SPTA1-202ENST00000461624 MLH3Q9UHC1 1453 aa9.21□□□□□ -0.93
SPTA1-202ENST00000461624 NEURL4Q96JN8 1562 aa9.21□□□□□ -0.93
SPTA1-202ENST00000461624 PLEKHD1A6NEE1 506 aa9.21□□□□□ -0.94
SPTA1-202ENST00000461624 KDM4AO75164 1064 aa9.21□□□□□ -0.94
SPTA1-202ENST00000461624 MDM2Q00987 491 aaPredicted RBP9.21□□□□□ -0.94
SPTA1-202ENST00000461624 RNF19BQ6ZMZ0 732 aa9.21□□□□□ -0.94
SPTA1-202ENST00000461624 SUPT6HQ7KZ85 1726 aaKnown RBP9.2□□□□□ -0.94
SPTA1-202ENST00000461624 TNFRSF10AO00220 468 aa9.2□□□□□ -0.94
SPTA1-202ENST00000461624 PRDM9Q9NQV7 894 aa9.2□□□□□ -0.94
SPTA1-202ENST00000461624 FAM187AA6NFU0 413 aa9.19□□□□□ -0.94
SPTA1-202ENST00000461624 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
SPTA1-202ENST00000461624 PIP4K2BP78356 416 aa9.19□□□□□ -0.94
SPTA1-202ENST00000461624 MYT1Q01538 1121 aa9.19□□□□□ -0.94
SPTA1-202ENST00000461624 ZNF787Q6DD87 383 aa9.19□□□□□ -0.94
SPTA1-202ENST00000461624 PKD2L1Q9P0L9 805 aa9.19□□□□□ -0.94
SPTA1-202ENST00000461624 CDK13Q14004 1512 aaKnown RBP9.19□□□□□ -0.94
SPTA1-202ENST00000461624 VWDEQ8N2E2 1590 aa9.19□□□□□ -0.94
SPTA1-202ENST00000461624 TOM1O60784 492 aa9.18□□□□□ -0.94
SPTA1-202ENST00000461624 CLCN1P35523 988 aa9.18□□□□□ -0.94
SPTA1-202ENST00000461624 AFAP1Q8N556 730 aa9.18□□□□□ -0.94
SPTA1-202ENST00000461624 GPCPD1Q9NPB8 672 aa9.18□□□□□ -0.94
SPTA1-202ENST00000461624 KIDINS220Q9ULH0 1771 aa9.18□□□□□ -0.94
SPTA1-202ENST00000461624 SHANK2Q9UPX8 1470 aa9.18□□□□□ -0.94
SPTA1-202ENST00000461624 SETD1AO15047 1707 aaKnown RBP9.17□□□□□ -0.94
SPTA1-202ENST00000461624 POLR1AO95602 1720 aaPredicted RBP9.17□□□□□ -0.94
SPTA1-202ENST00000461624 KIF14Q15058 1648 aa9.17□□□□□ -0.94
SPTA1-202ENST00000461624 PTPRKQ15262 1439 aa9.17□□□□□ -0.94
SPTA1-202ENST00000461624 MMP16P51512 607 aa9.17□□□□□ -0.94
SPTA1-202ENST00000461624 EFCAB2Q5VUJ9 269 aa9.16□□□□□ -0.94
SPTA1-202ENST00000461624 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.16□□□□□ -0.94
SPTA1-202ENST00000461624 FAM9AQ8IZU1 332 aaPredicted RBP9.16□□□□□ -0.94
SPTA1-202ENST00000461624 USB1Q9BQ65 265 aaKnown RBP9.16□□□□□ -0.94
SPTA1-202ENST00000461624 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
SPTA1-202ENST00000461624 ZMYM3Q14202 1370 aa9.15□□□□□ -0.94
SPTA1-202ENST00000461624 ZBTB24O43167 697 aaPredicted RBP9.15□□□□□ -0.94
SPTA1-202ENST00000461624 HOXA2O43364 376 aa9.15□□□□□ -0.94
SPTA1-202ENST00000461624 FOXC1Q12948 553 aa9.15□□□□□ -0.94
SPTA1-202ENST00000461624 FAM217BQ9NTX9 383 aaPredicted RBP9.15□□□□□ -0.94
SPTA1-202ENST00000461624 ABCC1P33527 1531 aa9.15□□□□□ -0.95
SPTA1-202ENST00000461624 CDC42BPBQ9Y5S2 1711 aa9.14□□□□□ -0.95
SPTA1-202ENST00000461624 ITSN2Q9NZM3 1697 aa9.14□□□□□ -0.95
SPTA1-202ENST00000461624 POTEAQ6S8J7 498 aa9.14□□□□□ -0.95
SPTA1-202ENST00000461624 STRCP1A6NGW2 1772 aa9.14□□□□□ -0.95
SPTA1-202ENST00000461624 A2ML1A8K2U0 1454 aa9.14□□□□□ -0.95
SPTA1-202ENST00000461624 CLTCQ00610 1675 aaKnown RBP9.13□□□□□ -0.95
SPTA1-202ENST00000461624 RNF17Q9BXT8 1623 aaKnown RBP9.13□□□□□ -0.95
SPTA1-202ENST00000461624 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
SPTA1-202ENST00000461624 TOR4AQ9NXH8 423 aa9.13□□□□□ -0.95
SPTA1-202ENST00000461624 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
SPTA1-202ENST00000461624 ARHGAP5Q13017 1502 aa9.12□□□□□ -0.95
SPTA1-202ENST00000461624 CRIPAKQ8N1N5 446 aa9.12□□□□□ -0.95
SPTA1-202ENST00000461624 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
SPTA1-202ENST00000461624 CYP4X1Q8N118 509 aa9.11□□□□□ -0.95
SPTA1-202ENST00000461624 ESF1Q9H501 851 aaKnown RBP9.11□□□□□ -0.95
SPTA1-202ENST00000461624 AVPP01185 164 aa9.1□□□□□ -0.95
SPTA1-202ENST00000461624 TRIM32Q13049 653 aa9.1□□□□□ -0.95
SPTA1-202ENST00000461624 HLA-CQ95604 372 aa9.1□□□□□ -0.95
SPTA1-202ENST00000461624 SYNMO15061 1565 aa9.1□□□□□ -0.95
SPTA1-202ENST00000461624 LRRC7Q96NW7 1537 aa9.1□□□□□ -0.95
SPTA1-202ENST00000461624 PREX2Q70Z35 1606 aa9.09□□□□□ -0.95
SPTA1-202ENST00000461624 WNT7AO00755 349 aa9.09□□□□□ -0.95
SPTA1-202ENST00000461624 NUTM1Q86Y26 1132 aa9.09□□□□□ -0.95
SPTA1-202ENST00000461624 AAASQ9NRG9 546 aa9.09□□□□□ -0.95
SPTA1-202ENST00000461624 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
SPTA1-202ENST00000461624 MED14O60244 1454 aa9.08□□□□□ -0.96
SPTA1-202ENST00000461624 SAMD9LQ8IVG5 1584 aa9.08□□□□□ -0.96
SPTA1-202ENST00000461624 BARGINQ6ZT62 677 aa9.08□□□□□ -0.96
SPTA1-202ENST00000461624 TROQ12816 1431 aaPredicted RBP9.07□□□□□ -0.96
SPTA1-202ENST00000461624 CTC1Q2NKJ3 1217 aa9.07□□□□□ -0.96
SPTA1-202ENST00000461624 XIRP1Q702N8 1843 aaKnown RBP9.07□□□□□ -0.96
SPTA1-202ENST00000461624 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
SPTA1-202ENST00000461624 ZMYND10O75800 440 aa9.06□□□□□ -0.96
SPTA1-202ENST00000461624 JUNDP17535 347 aa9.06□□□□□ -0.96
SPTA1-202ENST00000461624 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
SPTA1-202ENST00000461624 AMHR2Q16671 573 aa9.06□□□□□ -0.96
SPTA1-202ENST00000461624 RETREG3Q86VR2 466 aa9.06□□□□□ -0.96
SPTA1-202ENST00000461624 REPIN1Q9BWE0 567 aaKnown RBP9.06□□□□□ -0.96
SPTA1-202ENST00000461624 IQGAP1P46940 1657 aa9.05□□□□□ -0.96
SPTA1-202ENST00000461624 INO80Q9ULG1 1556 aaPredicted RBP9.05□□□□□ -0.96
SPTA1-202ENST00000461624 TTC24A2A3L6 582 aaPredicted RBP9.05□□□□□ -0.96
SPTA1-202ENST00000461624 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
SPTA1-202ENST00000461624 ZNF775Q96BV0 537 aaPredicted RBP9.05□□□□□ -0.96
SPTA1-202ENST00000461624 LRRIQ1Q96JM4 1722 aa9.05□□□□□ -0.96
SPTA1-202ENST00000461624 SSTR3P32745 418 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-202ENST00000461624 WNT7BP56706 349 aa9.04□□□□□ -0.96
SPTA1-202ENST00000461624 SNIP1Q8TAD8 396 aaKnown RBP9.04□□□□□ -0.96
SPTA1-202ENST00000461624 ZC3H13Q5T200 1668 aaKnown RBP9.04□□□□□ -0.96
SPTA1-202ENST00000461624 CDC42BPAQ5VT25 1732 aa9.03□□□□□ -0.96
SPTA1-202ENST00000461624 AXIN1O15169 862 aa9.03□□□□□ -0.96
SPTA1-202ENST00000461624 FDX1P10109 184 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms