RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 BCORL1Q5H9F3 1711 aa8.62□□□□□ -1.03
NUP98-208ENST00000461047 RNF17Q9BXT8 1623 aaKnown RBP8.62□□□□□ -1.03
NUP98-208ENST00000461047 PRDM15P57071 1507 aaPredicted RBP8.61□□□□□ -1.03
NUP98-208ENST00000461047 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
NUP98-208ENST00000461047 SLC52A1Q9NWF4 448 aa8.61□□□□□ -1.03
NUP98-208ENST00000461047 ARHGAP31Q2M1Z3 1444 aa8.61□□□□□ -1.03
NUP98-208ENST00000461047 LMTK2Q8IWU2 1503 aa8.6□□□□□ -1.03
NUP98-208ENST00000461047 RPRD2Q5VT52 1461 aaKnown RBP8.6□□□□□ -1.03
NUP98-208ENST00000461047 CEBPAP49715 358 aaPredicted RBP8.6□□□□□ -1.03
NUP98-208ENST00000461047 UNC13BO14795 1591 aa8.6□□□□□ -1.03
NUP98-208ENST00000461047 ABCC3O15438 1527 aa8.59□□□□□ -1.03
NUP98-208ENST00000461047 DEPDC5O75140 1603 aa8.59□□□□□ -1.03
NUP98-208ENST00000461047 CFHP08603 1231 aa8.59□□□□□ -1.03
NUP98-208ENST00000461047 FECHP22830 423 aa8.59□□□□□ -1.03
NUP98-208ENST00000461047 GGCXP38435 758 aa8.59□□□□□ -1.03
NUP98-208ENST00000461047 ZNF516Q92618 1163 aa8.59□□□□□ -1.03
NUP98-208ENST00000461047 ZC3H13Q5T200 1668 aaKnown RBP8.59□□□□□ -1.03
NUP98-208ENST00000461047 CLSPNQ9HAW4 1339 aa8.58□□□□□ -1.04
NUP98-208ENST00000461047 NPATQ14207 1427 aa8.58□□□□□ -1.04
NUP98-208ENST00000461047 GPR37O15354 613 aa8.58□□□□□ -1.04
NUP98-208ENST00000461047 FBXO31Q5XUX0 539 aaPredicted RBP8.58□□□□□ -1.04
NUP98-208ENST00000461047 TNRQ92752 1358 aa8.58□□□□□ -1.04
NUP98-208ENST00000461047 PZPP20742 1482 aa8.57□□□□□ -1.04
NUP98-208ENST00000461047 VWDEQ8N2E2 1590 aa8.57□□□□□ -1.04
NUP98-208ENST00000461047 THEMISQ8N1K5 641 aaPredicted RBP8.57□□□□□ -1.04
NUP98-208ENST00000461047 IRX2Q9BZI1 471 aaPredicted RBP8.57□□□□□ -1.04
NUP98-208ENST00000461047 IQGAP3Q86VI3 1631 aa8.57□□□□□ -1.04
NUP98-208ENST00000461047 PTPRMP28827 1452 aa8.57□□□□□ -1.04
NUP98-208ENST00000461047 ADAMTSL3P82987 1691 aa8.56□□□□□ -1.04
NUP98-208ENST00000461047 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
NUP98-208ENST00000461047 ZPR1O75312 459 aa8.56□□□□□ -1.04
NUP98-208ENST00000461047 RDH13Q8NBN7 331 aa8.56□□□□□ -1.04
NUP98-208ENST00000461047 DAXXQ9UER7 740 aaPredicted RBP8.56□□□□□ -1.04
NUP98-208ENST00000461047 TET3O43151 1660 aa8.56□□□□□ -1.04
NUP98-208ENST00000461047 CCDC144AA2RUR9 1427 aa8.55□□□□□ -1.04
NUP98-208ENST00000461047 MROH1Q8NDA8 1641 aa8.55□□□□□ -1.04
NUP98-208ENST00000461047 MADDQ8WXG6 1647 aa8.55□□□□□ -1.04
NUP98-208ENST00000461047 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
NUP98-208ENST00000461047 BLOC1S3Q6QNY0 202 aa8.55□□□□□ -1.04
NUP98-208ENST00000461047 SULF1Q8IWU6 871 aa8.55□□□□□ -1.04
NUP98-208ENST00000461047 MROH2AA6NES4 1674 aa8.55□□□□□ -1.04
NUP98-208ENST00000461047 CLTCQ00610 1675 aaKnown RBP8.55□□□□□ -1.04
NUP98-208ENST00000461047 EFCAB6Q5THR3 1501 aa8.54□□□□□ -1.04
NUP98-208ENST00000461047 FER1L4A9Z1Z3 1794 aa8.54□□□□□ -1.04
NUP98-208ENST00000461047 DHX57Q6P158 1386 aaKnown RBP8.54□□□□□ -1.04
NUP98-208ENST00000461047 DDX11L8A8MPP1 907 aa8.54□□□□□ -1.04
NUP98-208ENST00000461047 SLC10A3P09131 477 aa8.54□□□□□ -1.04
NUP98-208ENST00000461047 IDI1Q13907 227 aa8.54□□□□□ -1.04
NUP98-208ENST00000461047 ZNF326Q5BKZ1 582 aaKnown RBP8.54□□□□□ -1.04
NUP98-208ENST00000461047 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.54□□□□□ -1.04
NUP98-208ENST00000461047 CAMSAP1Q5T5Y3 1602 aa8.54□□□□□ -1.04
NUP98-208ENST00000461047 RIMS1Q86UR5 1692 aaKnown RBP8.53□□□□□ -1.04
NUP98-208ENST00000461047 ERVK-7P63135 1459 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 NLRP1Q9C000 1473 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 ANKRD30BQ9BXX2 1392 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 NR1I2O75469 434 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 NEUROD1Q13562 356 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.53□□□□□ -1.04
NUP98-208ENST00000461047 NKX2-3Q8TAU0 364 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 TIMELESSQ9UNS1 1208 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 EID1Q9Y6B2 187 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 SIGLEC1Q9BZZ2 1709 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 PTPRTO14522 1441 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 NOS1P29475 1434 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 UHRF1BP1Q6BDS2 1440 aa8.53□□□□□ -1.04
NUP98-208ENST00000461047 MAP2K5Q13163 448 aa8.52□□□□□ -1.05
NUP98-208ENST00000461047 RPGRIP1LQ68CZ1 1315 aa8.52□□□□□ -1.05
NUP98-208ENST00000461047 PPP1R15AO75807 674 aaPredicted RBP8.51□□□□□ -1.05
NUP98-208ENST00000461047 ANKLE2Q86XL3 938 aa8.51□□□□□ -1.05
NUP98-208ENST00000461047 NLRP7Q8WX94 980 aa8.51□□□□□ -1.05
NUP98-208ENST00000461047 CEP152O94986 1710 aa8.51□□□□□ -1.05
NUP98-208ENST00000461047 RGL3Q3MIN7 710 aa8.5□□□□□ -1.05
NUP98-208ENST00000461047 SPATA31D1Q6ZQQ2 1576 aa8.5□□□□□ -1.05
NUP98-208ENST00000461047 BCANQ96GW7 911 aa8.5□□□□□ -1.05
NUP98-208ENST00000461047 TMUB1Q9BVT8 246 aa8.5□□□□□ -1.05
NUP98-208ENST00000461047 PRKD2Q9BZL6 878 aa8.5□□□□□ -1.05
NUP98-208ENST00000461047 MINK1Q8N4C8 1332 aaPredicted RBP8.5□□□□□ -1.05
NUP98-208ENST00000461047 TONSLQ96HA7 1378 aa8.49□□□□□ -1.05
NUP98-208ENST00000461047 A2ML1A8K2U0 1454 aa8.49□□□□□ -1.05
NUP98-208ENST00000461047 E9PCH4 1651 aa8.49□□□□□ -1.05
NUP98-208ENST00000461047 C3P01024 1663 aa8.49□□□□□ -1.05
NUP98-208ENST00000461047 TRPM2O94759 1503 aa8.49□□□□□ -1.05
NUP98-208ENST00000461047 IRF6O14896 467 aa8.48□□□□□ -1.05
NUP98-208ENST00000461047 ZEB1P37275 1124 aaPredicted RBP8.48□□□□□ -1.05
NUP98-208ENST00000461047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUP98-208ENST00000461047 TXNDC2Q86VQ3 553 aa8.48□□□□□ -1.05
NUP98-208ENST00000461047 KRI1Q8N9T8 703 aaKnown RBP8.48□□□□□ -1.05
NUP98-208ENST00000461047 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
NUP98-208ENST00000461047 PHOX2BQ99453 314 aa8.48□□□□□ -1.05
NUP98-208ENST00000461047 PREX1Q8TCU6 1659 aa8.47□□□□□ -1.05
NUP98-208ENST00000461047 PLA2R1Q13018 1463 aa8.47□□□□□ -1.05
NUP98-208ENST00000461047 TLL1O43897 1013 aa8.47□□□□□ -1.05
NUP98-208ENST00000461047 PUS10Q3MIT2 529 aaKnown RBP8.47□□□□□ -1.05
NUP98-208ENST00000461047 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
NUP98-208ENST00000461047 DCAF11Q8TEB1 546 aa8.47□□□□□ -1.05
NUP98-208ENST00000461047 V9GY48 417 aaPredicted RBP8.47□□□□□ -1.05
NUP98-208ENST00000461047 UGGT1Q9NYU2 1555 aa8.47□□□□□ -1.05
NUP98-208ENST00000461047 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.05
NUP98-208ENST00000461047 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
NUP98-208ENST00000461047 SCUBE3Q8IX30 993 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms