RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 ITPRIPQ8IWB1 547 aa19.3■□□□□ 0.68
SSR4-206ENST00000460616 IQSEC2Q5JU85 1478 aa19.29■□□□□ 0.68
SSR4-206ENST00000460616 NPHP4O75161 1426 aaPredicted RBP19.29■□□□□ 0.68
SSR4-206ENST00000460616 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.29■□□□□ 0.68
SSR4-206ENST00000460616 FOXD4L1Q9NU39 408 aa19.29■□□□□ 0.68
SSR4-206ENST00000460616 GOLGA6L22H0YM25 854 aa19.29■□□□□ 0.68
SSR4-206ENST00000460616 TERF1P54274 439 aa19.29■□□□□ 0.68
SSR4-206ENST00000460616 SMC4Q9NTJ3 1288 aa19.29■□□□□ 0.68
SSR4-206ENST00000460616 PTPRUQ92729 1446 aa19.29■□□□□ 0.68
SSR4-206ENST00000460616 TRIM27P14373 513 aa19.28■□□□□ 0.68
SSR4-206ENST00000460616 QRICH2Q9H0J4 1663 aa19.28■□□□□ 0.68
SSR4-206ENST00000460616 CALD1Q05682 793 aaKnown RBP19.28■□□□□ 0.68
SSR4-206ENST00000460616 CT47B1P0C2W7 299 aaPredicted RBP19.27■□□□□ 0.68
SSR4-206ENST00000460616 RBM10P98175 930 aaKnown RBP19.27■□□□□ 0.67
SSR4-206ENST00000460616 DIP2AQ14689 1571 aa19.27■□□□□ 0.67
SSR4-206ENST00000460616 DDX49Q9Y6V7 483 aaKnown RBP19.26■□□□□ 0.67
SSR4-206ENST00000460616 RIPK4P57078 832 aa19.26■□□□□ 0.67
SSR4-206ENST00000460616 NUCB1Q02818 461 aa19.26■□□□□ 0.67
SSR4-206ENST00000460616 SAFB2Q14151 953 aaKnown RBP eCLIP19.26■□□□□ 0.67
SSR4-206ENST00000460616 KLHL40Q2TBA0 621 aa19.26■□□□□ 0.67
SSR4-206ENST00000460616 KIF2CQ99661 725 aa19.26■□□□□ 0.67
SSR4-206ENST00000460616 KNDC1Q76NI1 1749 aa19.26■□□□□ 0.67
SSR4-206ENST00000460616 MTHFSP49914 203 aa19.25■□□□□ 0.67
SSR4-206ENST00000460616 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
SSR4-206ENST00000460616 ATF7IPQ6VMQ6 1270 aa19.25■□□□□ 0.67
SSR4-206ENST00000460616 CFAP53Q96M91 514 aa19.25■□□□□ 0.67
SSR4-206ENST00000460616 K7ELQ4 463 aaPredicted RBP19.25■□□□□ 0.67
SSR4-206ENST00000460616 SSFA2P28290 1259 aa19.25■□□□□ 0.67
SSR4-206ENST00000460616 TSR2Q969E8 191 aaKnown RBP19.25■□□□□ 0.67
SSR4-206ENST00000460616 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
SSR4-206ENST00000460616 IBTKQ9P2D0 1353 aaPredicted RBP19.24■□□□□ 0.67
SSR4-206ENST00000460616 CD2BP2O95400 341 aaKnown RBP19.24■□□□□ 0.67
SSR4-206ENST00000460616 LNPKQ9C0E8 428 aa19.24■□□□□ 0.67
SSR4-206ENST00000460616 TBX22Q9Y458 520 aa19.24■□□□□ 0.67
SSR4-206ENST00000460616 CHD2O14647 1828 aaKnown RBP19.23■□□□□ 0.67
SSR4-206ENST00000460616 CLEC17AQ6ZS10 378 aa19.23■□□□□ 0.67
SSR4-206ENST00000460616 SSH1Q8WYL5 1049 aa19.23■□□□□ 0.67
SSR4-206ENST00000460616 MAP7D2Q96T17 732 aa19.23■□□□□ 0.67
SSR4-206ENST00000460616 ZBTB40Q9NUA8 1239 aa19.23■□□□□ 0.67
SSR4-206ENST00000460616 EXOSC9Q06265 439 aaKnown RBP19.23■□□□□ 0.67
SSR4-206ENST00000460616 NSD3Q9BZ95 1437 aa19.23■□□□□ 0.67
SSR4-206ENST00000460616 XRN1Q8IZH2 1706 aaKnown RBP19.22■□□□□ 0.67
SSR4-206ENST00000460616 CHD1LQ86WJ1 897 aa19.22■□□□□ 0.67
SSR4-206ENST00000460616 FAM13BQ9NYF5 915 aa19.22■□□□□ 0.67
SSR4-206ENST00000460616 NOB1Q9ULX3 412 aaKnown RBP19.22■□□□□ 0.67
SSR4-206ENST00000460616 R3HCC1Q9Y3T6 440 aaKnown RBP19.22■□□□□ 0.67
SSR4-206ENST00000460616 HS1BP3Q53T59 392 aa19.22■□□□□ 0.67
SSR4-206ENST00000460616 BMP2KLQ5H9B9 411 aa19.22■□□□□ 0.67
SSR4-206ENST00000460616 WAPLQ7Z5K2 1190 aa19.22■□□□□ 0.67
SSR4-206ENST00000460616 CPS1P31327 1500 aa19.21■□□□□ 0.67
SSR4-206ENST00000460616 BAG4O95429 457 aaKnown RBP19.21■□□□□ 0.67
SSR4-206ENST00000460616 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
SSR4-206ENST00000460616 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.67
SSR4-206ENST00000460616 TMEM57Q8N5G2 664 aa19.21■□□□□ 0.67
SSR4-206ENST00000460616 PRAM1Q96QH2 718 aa19.21■□□□□ 0.67
SSR4-206ENST00000460616 ROBO2Q9HCK4 1378 aa19.2■□□□□ 0.66
SSR4-206ENST00000460616 GAS2L2Q8NHY3 880 aa19.2■□□□□ 0.66
SSR4-206ENST00000460616 ABCC11Q96J66 1382 aa19.2■□□□□ 0.66
SSR4-206ENST00000460616 DLC1Q96QB1 1528 aa19.2■□□□□ 0.66
SSR4-206ENST00000460616 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
SSR4-206ENST00000460616 SLC12A5Q9H2X9 1139 aa19.19■□□□□ 0.66
SSR4-206ENST00000460616 AMOTL2Q9Y2J4 779 aa19.19■□□□□ 0.66
SSR4-206ENST00000460616 ZNF445P59923 1031 aa19.19■□□□□ 0.66
SSR4-206ENST00000460616 NOL7Q9UMY1 257 aaKnown RBP19.19■□□□□ 0.66
SSR4-206ENST00000460616 PRDM4Q9UKN5 801 aa19.18■□□□□ 0.66
SSR4-206ENST00000460616 TECPR2O15040 1411 aa19.18■□□□□ 0.66
SSR4-206ENST00000460616 STRCP1A6NGW2 1772 aa19.18■□□□□ 0.66
SSR4-206ENST00000460616 ZNF500O60304 480 aaPredicted RBP19.17■□□□□ 0.66
SSR4-206ENST00000460616 KCNA6P17658 529 aa19.17■□□□□ 0.66
SSR4-206ENST00000460616 NCLP19338 710 aaKnown RBP19.17■□□□□ 0.66
SSR4-206ENST00000460616 MINK1Q8N4C8 1332 aaPredicted RBP19.16■□□□□ 0.66
SSR4-206ENST00000460616 IPO8O15397 1037 aaKnown RBP19.16■□□□□ 0.66
SSR4-206ENST00000460616 TULP4Q9NRJ4 1543 aa19.16■□□□□ 0.66
SSR4-206ENST00000460616 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.16■□□□□ 0.66
SSR4-206ENST00000460616 ZSCAN23Q3MJ62 389 aa19.15■□□□□ 0.66
SSR4-206ENST00000460616 ANKRD45Q5TZF3 282 aa19.15■□□□□ 0.66
SSR4-206ENST00000460616 MCTP1Q6DN14 999 aa19.15■□□□□ 0.66
SSR4-206ENST00000460616 CAVIN1Q6NZI2 390 aaKnown RBP19.15■□□□□ 0.66
SSR4-206ENST00000460616 TBC1D9Q6ZT07 1266 aa19.15■□□□□ 0.66
SSR4-206ENST00000460616 RBM33Q96EV2 1170 aaKnown RBP19.15■□□□□ 0.66
SSR4-206ENST00000460616 UQCRHLA0A096LP55 91 aa19.14■□□□□ 0.65
SSR4-206ENST00000460616 UQCRHP07919 91 aa19.14■□□□□ 0.65
SSR4-206ENST00000460616 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
SSR4-206ENST00000460616 SBNO2Q9Y2G9 1366 aa19.14■□□□□ 0.65
SSR4-206ENST00000460616 RBSNQ9H1K0 784 aa19.13■□□□□ 0.65
SSR4-206ENST00000460616 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.13■□□□□ 0.65
SSR4-206ENST00000460616 PIK3R4Q99570 1358 aa19.13■□□□□ 0.65
SSR4-206ENST00000460616 KIF16BQ96L93 1317 aa19.13■□□□□ 0.65
SSR4-206ENST00000460616 PDLIM2Q96JY6 352 aa19.13■□□□□ 0.65
SSR4-206ENST00000460616 NWD1Q149M9 1564 aa19.12■□□□□ 0.65
SSR4-206ENST00000460616 PTCH1Q13635 1447 aa19.12■□□□□ 0.65
SSR4-206ENST00000460616 FAM135BQ49AJ0 1406 aa19.11■□□□□ 0.65
SSR4-206ENST00000460616 NUCB2P80303 420 aa19.11■□□□□ 0.65
SSR4-206ENST00000460616 CSPP1Q1MSJ5 1256 aa19.11■□□□□ 0.65
SSR4-206ENST00000460616 MTERF4Q7Z6M4 381 aaKnown RBP19.11■□□□□ 0.65
SSR4-206ENST00000460616 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
SSR4-206ENST00000460616 LMBRD1Q9NUN5 540 aa19.11■□□□□ 0.65
SSR4-206ENST00000460616 TRIM35Q9UPQ4 493 aa19.11■□□□□ 0.65
SSR4-206ENST00000460616 GCC1Q96CN9 775 aa19.1■□□□□ 0.65
SSR4-206ENST00000460616 PRIM1P49642 420 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms