RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 OVOS2Q6IE36 1432 aa21.7■■□□□ 1.06
LMNA-209ENST00000459904 DDB1Q16531 1140 aa21.69■■□□□ 1.06
LMNA-209ENST00000459904 MARCH10Q8NA82 808 aaPredicted RBP21.69■■□□□ 1.06
LMNA-209ENST00000459904 TTC21BQ7Z4L5 1316 aa21.69■■□□□ 1.06
LMNA-209ENST00000459904 EVC2Q86UK5 1308 aa21.69■■□□□ 1.06
LMNA-209ENST00000459904 CPSF1Q10570 1443 aaKnown RBP21.68■■□□□ 1.06
LMNA-209ENST00000459904 LTN1O94822 1766 aa21.67■■□□□ 1.06
LMNA-209ENST00000459904 CASZ1Q86V15 1759 aa21.67■■□□□ 1.06
LMNA-209ENST00000459904 MON2Q7Z3U7 1717 aa21.67■■□□□ 1.06
LMNA-209ENST00000459904 RGPD3A6NKT7 1758 aaPredicted RBP21.66■■□□□ 1.06
LMNA-209ENST00000459904 RGPD4Q7Z3J3 1758 aa21.66■■□□□ 1.06
LMNA-209ENST00000459904 BRD4O60885 1362 aaPredicted RBP21.66■■□□□ 1.06
LMNA-209ENST00000459904 ROCK2O75116 1388 aaKnown RBP21.66■■□□□ 1.06
LMNA-209ENST00000459904 WDR17Q8IZU2 1322 aa21.66■■□□□ 1.06
LMNA-209ENST00000459904 ARHGEF25Q86VW2 580 aa21.66■■□□□ 1.06
LMNA-209ENST00000459904 CSB-PGBD3P0DP91 1061 aa21.65■■□□□ 1.06
LMNA-209ENST00000459904 NFAT5O94916 1531 aa21.65■■□□□ 1.06
LMNA-209ENST00000459904 PROM2Q8N271 834 aa21.64■■□□□ 1.05
LMNA-209ENST00000459904 PPP1R1BQ9UD71 204 aaPredicted RBP21.64■■□□□ 1.05
LMNA-209ENST00000459904 KCNQ2O43526 872 aa21.63■■□□□ 1.05
LMNA-209ENST00000459904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.63■■□□□ 1.05
LMNA-209ENST00000459904 SPON1Q9HCB6 807 aa21.62■■□□□ 1.05
LMNA-209ENST00000459904 KTN1Q86UP2 1357 aaKnown RBP21.61■■□□□ 1.05
LMNA-209ENST00000459904 MYOM1P52179 1685 aa21.6■■□□□ 1.05
LMNA-209ENST00000459904 BCL11BQ9C0K0 894 aaPredicted RBP21.6■■□□□ 1.05
LMNA-209ENST00000459904 PLSCR1O15162 318 aa21.59■■□□□ 1.05
LMNA-209ENST00000459904 ZBTB7AO95365 584 aa21.59■■□□□ 1.05
LMNA-209ENST00000459904 NME9Q86XW9 330 aa21.59■■□□□ 1.05
LMNA-209ENST00000459904 YY1P25490 414 aa21.58■■□□□ 1.05
LMNA-209ENST00000459904 ACSBG1Q96GR2 724 aa21.58■■□□□ 1.05
LMNA-209ENST00000459904 ZNF692Q9BU19 519 aaPredicted RBP21.58■■□□□ 1.05
LMNA-209ENST00000459904 CARD10Q9BWT7 1032 aa21.58■■□□□ 1.05
LMNA-209ENST00000459904 KCNH5Q8NCM2 988 aa21.57■■□□□ 1.04
LMNA-209ENST00000459904 ATF5Q9Y2D1 282 aaPredicted RBP21.57■■□□□ 1.04
LMNA-209ENST00000459904 BTAF1O14981 1849 aa21.56■■□□□ 1.04
LMNA-209ENST00000459904 CD163L1Q9NR16 1453 aa21.56■■□□□ 1.04
LMNA-209ENST00000459904 RGPD2P0DJD1 1756 aa21.56■■□□□ 1.04
LMNA-209ENST00000459904 TTC21AQ8NDW8 1320 aa21.55■■□□□ 1.04
LMNA-209ENST00000459904 EXOC5O00471 708 aa21.55■■□□□ 1.04
LMNA-209ENST00000459904 NHSQ6T4R5 1651 aa21.55■■□□□ 1.04
LMNA-209ENST00000459904 USP54Q70EL1 1684 aa21.54■■□□□ 1.04
LMNA-209ENST00000459904 TXNRD1Q16881 649 aa21.54■■□□□ 1.04
LMNA-209ENST00000459904 TMC1Q8TDI8 760 aa21.54■■□□□ 1.04
LMNA-209ENST00000459904 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
LMNA-209ENST00000459904 SLC12A5Q9H2X9 1139 aa21.52■■□□□ 1.04
LMNA-209ENST00000459904 NLRP2Q9NX02 1062 aa21.52■■□□□ 1.04
LMNA-209ENST00000459904 TNS2Q63HR2 1409 aa21.51■■□□□ 1.03
LMNA-209ENST00000459904 SBNO2Q9Y2G9 1366 aa21.5■■□□□ 1.03
LMNA-209ENST00000459904 CDCA7Q9BWT1 371 aaPredicted RBP21.5■■□□□ 1.03
LMNA-209ENST00000459904 CARD11Q9BXL7 1154 aa21.5■■□□□ 1.03
LMNA-209ENST00000459904 PTGER2P43116 358 aa21.49■■□□□ 1.03
LMNA-209ENST00000459904 CCDC7Q96M83 1385 aa21.48■■□□□ 1.03
LMNA-209ENST00000459904 BCL9O00512 1426 aa21.48■■□□□ 1.03
LMNA-209ENST00000459904 STK32BQ9NY57 414 aa21.48■■□□□ 1.03
LMNA-209ENST00000459904 NINLQ9Y2I6 1382 aa21.48■■□□□ 1.03
LMNA-209ENST00000459904 UTRNP46939 3433 aa21.47■■□□□ 1.03
LMNA-209ENST00000459904 FBLN1P23142 703 aa21.47■■□□□ 1.03
LMNA-209ENST00000459904 SLC15A2Q16348 729 aa21.47■■□□□ 1.03
LMNA-209ENST00000459904 ANKRD24Q8TF21 1146 aa21.47■■□□□ 1.03
LMNA-209ENST00000459904 LTV1Q96GA3 475 aaPredicted RBP21.47■■□□□ 1.03
LMNA-209ENST00000459904 ERBB3P21860 1342 aa21.47■■□□□ 1.03
LMNA-209ENST00000459904 USP31Q70CQ4 1352 aa21.47■■□□□ 1.03
LMNA-209ENST00000459904 TUBGCP6Q96RT7 1819 aa21.46■■□□□ 1.03
LMNA-209ENST00000459904 ABCC6O95255 1503 aa21.46■■□□□ 1.03
LMNA-209ENST00000459904 PAPPAQ13219 1627 aa21.45■■□□□ 1.02
LMNA-209ENST00000459904 A0A1W2PP64 1363 aa21.44■■□□□ 1.02
LMNA-209ENST00000459904 IL2RBP14784 551 aa21.43■■□□□ 1.02
LMNA-209ENST00000459904 CHD4Q14839 1912 aa21.43■■□□□ 1.02
LMNA-209ENST00000459904 KCNQ4P56696 695 aa21.42■■□□□ 1.02
LMNA-209ENST00000459904 ZNF827Q17R98 1081 aa21.42■■□□□ 1.02
LMNA-209ENST00000459904 HDGFL2Q7Z4V5 671 aaPredicted RBP21.42■■□□□ 1.02
LMNA-209ENST00000459904 FHDC1Q9C0D6 1143 aaPredicted RBP21.42■■□□□ 1.02
LMNA-209ENST00000459904 DOT1LQ8TEK3 1739 aa21.41■■□□□ 1.02
LMNA-209ENST00000459904 SHANK3Q9BYB0 1731 aa21.41■■□□□ 1.02
LMNA-209ENST00000459904 LRRC4BQ9NT99 713 aa21.41■■□□□ 1.02
LMNA-209ENST00000459904 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
LMNA-209ENST00000459904 DCAF8L1A6NGE4 600 aa21.4■■□□□ 1.02
LMNA-209ENST00000459904 DDX54Q8TDD1 881 aaKnown RBP21.4■■□□□ 1.02
LMNA-209ENST00000459904 SGIP1Q9BQI5 828 aa21.38■■□□□ 1.01
LMNA-209ENST00000459904 SYT17Q9BSW7 474 aa21.38■■□□□ 1.01
LMNA-209ENST00000459904 FAM208AQ9UK61 1670 aaKnown RBP21.37■■□□□ 1.01
LMNA-209ENST00000459904 MTFR1LQ9H019 292 aa21.36■■□□□ 1.01
LMNA-209ENST00000459904 TONSLQ96HA7 1378 aa21.35■■□□□ 1.01
LMNA-209ENST00000459904 ST20-MTHFSA0A0A6YYL1 179 aa21.34■■□□□ 1.01
LMNA-209ENST00000459904 IP6K1Q92551 441 aa21.34■■□□□ 1.01
LMNA-209ENST00000459904 TERF2IPQ9NYB0 399 aa21.34■■□□□ 1.01
LMNA-209ENST00000459904 LY75O60449 1722 aa21.32■■□□□ 1
LMNA-209ENST00000459904 QSER1Q2KHR3 1735 aa21.32■■□□□ 1
LMNA-209ENST00000459904 MAP3K19Q56UN5 1328 aa21.32■■□□□ 1
LMNA-209ENST00000459904 KLHL34Q8N239 644 aa21.32■■□□□ 1
LMNA-209ENST00000459904 USHBP1Q8N6Y0 703 aa21.32■■□□□ 1
LMNA-209ENST00000459904 SYTL4Q96C24 671 aaPredicted RBP21.32■■□□□ 1
LMNA-209ENST00000459904 ARXQ96QS3 562 aa21.32■■□□□ 1
LMNA-209ENST00000459904 TESK2Q96S53 571 aa21.32■■□□□ 1
LMNA-209ENST00000459904 GOLGB1Q14789 3259 aaKnown RBP21.31■■□□□ 1
LMNA-209ENST00000459904 PRIM1P49642 420 aaKnown RBP21.31■■□□□ 1
LMNA-209ENST00000459904 HOXC9P31274 260 aa21.3■■□□□ 1
LMNA-209ENST00000459904 MEGF6O75095 1541 aa21.29■■□□□ 1
LMNA-209ENST00000459904 RRS1Q15050 365 aaKnown RBP21.29■■□□□ 1
LMNA-209ENST00000459904 ZNF784Q8NCA9 323 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms