RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
COL18A1-206ENST00000459895 BTG4Q9NY30 223 aa17.63■□□□□ 0.41
COL18A1-206ENST00000459895 LRRC37A3O60309 1634 aa17.62■□□□□ 0.41
COL18A1-206ENST00000459895 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-206ENST00000459895 BLMP54132 1417 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-206ENST00000459895 UNC5CLQ8IV45 518 aa17.61■□□□□ 0.41
COL18A1-206ENST00000459895 KNSTRNQ9Y448 316 aa17.61■□□□□ 0.41
COL18A1-206ENST00000459895 MAP3K19Q56UN5 1328 aa17.61■□□□□ 0.41
COL18A1-206ENST00000459895 BRWD3Q6RI45 1802 aa17.61■□□□□ 0.41
COL18A1-206ENST00000459895 PER1O15534 1290 aaPredicted RBP17.6■□□□□ 0.41
COL18A1-206ENST00000459895 FBLN1P23142 703 aa17.6■□□□□ 0.41
COL18A1-206ENST00000459895 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
COL18A1-206ENST00000459895 CDK12Q9NYV4 1490 aaPredicted RBP17.6■□□□□ 0.41
COL18A1-206ENST00000459895 PARP4Q9UKK3 1724 aaKnown RBP17.6■□□□□ 0.41
COL18A1-206ENST00000459895 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
COL18A1-206ENST00000459895 TRPC5Q9UL62 973 aaPredicted RBP17.58■□□□□ 0.4
COL18A1-206ENST00000459895 CRB1P82279 1406 aa17.57■□□□□ 0.4
COL18A1-206ENST00000459895 FLT4P35916 1363 aa17.57■□□□□ 0.4
COL18A1-206ENST00000459895 STRN4Q9NRL3 753 aa17.57■□□□□ 0.4
COL18A1-206ENST00000459895 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
COL18A1-206ENST00000459895 RGPD1P0DJD0 1748 aa17.56■□□□□ 0.4
COL18A1-206ENST00000459895 ERBB3P21860 1342 aa17.56■□□□□ 0.4
COL18A1-206ENST00000459895 VPS72Q15906 364 aa17.56■□□□□ 0.4
COL18A1-206ENST00000459895 EMILIN1Q9Y6C2 1016 aa17.56■□□□□ 0.4
COL18A1-206ENST00000459895 TNNT2P45379 298 aaPredicted RBP17.55■□□□□ 0.4
COL18A1-206ENST00000459895 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
COL18A1-206ENST00000459895 KIF24Q5T7B8 1368 aa17.54■□□□□ 0.4
COL18A1-206ENST00000459895 WDR17Q8IZU2 1322 aa17.54■□□□□ 0.4
COL18A1-206ENST00000459895 HOXC9P31274 260 aa17.54■□□□□ 0.4
COL18A1-206ENST00000459895 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
COL18A1-206ENST00000459895 SHANK3Q9BYB0 1731 aa17.54■□□□□ 0.4
COL18A1-206ENST00000459895 SPATA31A5Q5VU36 1347 aa17.53■□□□□ 0.4
COL18A1-206ENST00000459895 SPATA31A7Q8IWB4 1347 aa17.53■□□□□ 0.4
COL18A1-206ENST00000459895 COL3A1P02461 1466 aaPredicted RBP17.53■□□□□ 0.4
COL18A1-206ENST00000459895 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
COL18A1-206ENST00000459895 SPATA31A1Q5TZJ5 1347 aa17.52■□□□□ 0.4
COL18A1-206ENST00000459895 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
COL18A1-206ENST00000459895 CNGB1Q14028 1251 aaPredicted RBP17.52■□□□□ 0.4
COL18A1-206ENST00000459895 ILDR2Q71H61 639 aa17.52■□□□□ 0.4
COL18A1-206ENST00000459895 MORC1Q86VD1 984 aa17.52■□□□□ 0.4
COL18A1-206ENST00000459895 CCDC9Q9Y3X0 531 aaKnown RBP17.52■□□□□ 0.4
COL18A1-206ENST00000459895 INSRP06213 1382 aa17.52■□□□□ 0.39
COL18A1-206ENST00000459895 DISP2A7MBM2 1401 aa17.51■□□□□ 0.39
COL18A1-206ENST00000459895 AMPHP49418 695 aa17.51■□□□□ 0.39
COL18A1-206ENST00000459895 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
COL18A1-206ENST00000459895 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
COL18A1-206ENST00000459895 IP6K1Q92551 441 aa17.51■□□□□ 0.39
COL18A1-206ENST00000459895 GJD4Q96KN9 370 aaPredicted RBP17.51■□□□□ 0.39
COL18A1-206ENST00000459895 RXRBP28702 533 aa17.5■□□□□ 0.39
COL18A1-206ENST00000459895 ANKRD24Q8TF21 1146 aa17.5■□□□□ 0.39
COL18A1-206ENST00000459895 PARD3Q8TEW0 1356 aa17.5■□□□□ 0.39
COL18A1-206ENST00000459895 POLKQ9UBT6 870 aa17.49■□□□□ 0.39
COL18A1-206ENST00000459895 PKD1L3Q7Z443 1732 aa17.49■□□□□ 0.39
COL18A1-206ENST00000459895 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
COL18A1-206ENST00000459895 EVA1CP58658 441 aa17.48■□□□□ 0.39
COL18A1-206ENST00000459895 MEGF6O75095 1541 aa17.47■□□□□ 0.39
COL18A1-206ENST00000459895 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
COL18A1-206ENST00000459895 CSB-PGBD3P0DP91 1061 aa17.47■□□□□ 0.39
COL18A1-206ENST00000459895 HSP90AB2PQ58FF8 381 aa17.47■□□□□ 0.39
COL18A1-206ENST00000459895 TOM1L2Q6ZVM7 507 aa17.47■□□□□ 0.39
COL18A1-206ENST00000459895 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
COL18A1-206ENST00000459895 USP35Q9P2H5 1018 aa17.47■□□□□ 0.39
COL18A1-206ENST00000459895 TNS2Q63HR2 1409 aa17.47■□□□□ 0.39
COL18A1-206ENST00000459895 EP400Q96L91 3159 aa17.46■□□□□ 0.39
COL18A1-206ENST00000459895 FAM98CQ17RN3 349 aaKnown RBP17.46■□□□□ 0.39
COL18A1-206ENST00000459895 TCP11L2Q8N4U5 519 aa17.43■□□□□ 0.38
COL18A1-206ENST00000459895 CARD10Q9BWT7 1032 aa17.43■□□□□ 0.38
COL18A1-206ENST00000459895 TNS1Q9HBL0 1735 aaKnown RBP17.43■□□□□ 0.38
COL18A1-206ENST00000459895 A0A0G2JS52 829 aa17.42■□□□□ 0.38
COL18A1-206ENST00000459895 MYT1Q01538 1121 aa17.42■□□□□ 0.38
COL18A1-206ENST00000459895 NLRP2Q9NX02 1062 aa17.42■□□□□ 0.38
COL18A1-206ENST00000459895 DOT1LQ8TEK3 1739 aa17.41■□□□□ 0.38
COL18A1-206ENST00000459895 OVOS2A0A0G2JMS6 1433 aa17.41■□□□□ 0.38
COL18A1-206ENST00000459895 BARGINQ6ZT62 677 aa17.41■□□□□ 0.38
COL18A1-206ENST00000459895 USHBP1Q8N6Y0 703 aa17.41■□□□□ 0.38
COL18A1-206ENST00000459895 EIF4A2Q14240 407 aaKnown RBP17.4■□□□□ 0.38
COL18A1-206ENST00000459895 SEPT12Q8IYM1 358 aa17.4■□□□□ 0.38
COL18A1-206ENST00000459895 THRAP3Q9Y2W1 955 aaKnown RBP17.4■□□□□ 0.38
COL18A1-206ENST00000459895 MTHFSP49914 203 aa17.39■□□□□ 0.37
COL18A1-206ENST00000459895 SBF2Q86WG5 1849 aa17.39■□□□□ 0.37
COL18A1-206ENST00000459895 TOGARAM1Q9Y4F4 1720 aa17.38■□□□□ 0.37
COL18A1-206ENST00000459895 ONECUT3O60422 494 aaPredicted RBP17.38■□□□□ 0.37
COL18A1-206ENST00000459895 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
COL18A1-206ENST00000459895 NBPF6Q5VWK0 638 aa17.38■□□□□ 0.37
COL18A1-206ENST00000459895 NBPF4Q96M43 638 aa17.38■□□□□ 0.37
COL18A1-206ENST00000459895 NHSQ6T4R5 1651 aa17.38■□□□□ 0.37
COL18A1-206ENST00000459895 IGSF1Q8N6C5 1336 aa17.37■□□□□ 0.37
COL18A1-206ENST00000459895 IL2RBP14784 551 aa17.34■□□□□ 0.37
COL18A1-206ENST00000459895 EYA1Q99502 592 aa17.34■□□□□ 0.37
COL18A1-206ENST00000459895 VIRMAQ69YN4 1812 aaKnown RBP17.33■□□□□ 0.37
COL18A1-206ENST00000459895 KDRP35968 1356 aa17.33■□□□□ 0.36
COL18A1-206ENST00000459895 MYBBP1AQ9BQG0 1328 aaKnown RBP17.33■□□□□ 0.36
COL18A1-206ENST00000459895 IL13P35225 146 aa17.33■□□□□ 0.36
COL18A1-206ENST00000459895 RALBP1Q15311 655 aa17.32■□□□□ 0.36
COL18A1-206ENST00000459895 KRT27Q7Z3Y8 459 aa17.32■□□□□ 0.36
COL18A1-206ENST00000459895 CDCA7Q9BWT1 371 aaPredicted RBP17.32■□□□□ 0.36
COL18A1-206ENST00000459895 DDB1Q16531 1140 aa17.31■□□□□ 0.36
COL18A1-206ENST00000459895 AEBP1Q8IUX7 1158 aa17.31■□□□□ 0.36
COL18A1-206ENST00000459895 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
COL18A1-206ENST00000459895 FAM182BQ5T319 152 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms