RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CDR1P51861 262 aa11.94□□□□□ -0.5
UFD1-205ENST00000459854 DHX8Q14562 1220 aaKnown RBP11.94□□□□□ -0.5
UFD1-205ENST00000459854 SLAIN2Q9P270 581 aa11.93□□□□□ -0.5
UFD1-205ENST00000459854 NAP1L2Q9ULW6 460 aaPredicted RBP11.93□□□□□ -0.5
UFD1-205ENST00000459854 TPM1P09493 284 aa11.93□□□□□ -0.5
UFD1-205ENST00000459854 GPATCH3Q96I76 525 aa11.93□□□□□ -0.5
UFD1-205ENST00000459854 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
UFD1-205ENST00000459854 ADAMTS13Q76LX8 1427 aa11.92□□□□□ -0.5
UFD1-205ENST00000459854 KRT28Q7Z3Y7 464 aa11.92□□□□□ -0.5
UFD1-205ENST00000459854 RRP1P56182 461 aaKnown RBP11.92□□□□□ -0.5
UFD1-205ENST00000459854 CCDC173Q0VFZ6 552 aa11.92□□□□□ -0.5
UFD1-205ENST00000459854 NFKBIBQ15653 356 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 ITPRIPQ8IWB1 547 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 WASHC2AQ641Q2 1341 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 SBNO2Q9Y2G9 1366 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 A0A0G2JS52 829 aa11.91□□□□□ -0.5
UFD1-205ENST00000459854 ERCC4Q92889 916 aaPredicted RBP11.91□□□□□ -0.5
UFD1-205ENST00000459854 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
UFD1-205ENST00000459854 SIGLEC1Q9BZZ2 1709 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 ACEP12821 1306 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 AK7Q96M32 723 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 PPIP5K1Q6PFW1 1433 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 LETM1O95202 739 aaPredicted RBP11.9□□□□□ -0.5
UFD1-205ENST00000459854 EVA1CP58658 441 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 XPCQ01831 940 aaPredicted RBP11.9□□□□□ -0.5
UFD1-205ENST00000459854 TSR1Q2NL82 804 aaKnown RBP11.9□□□□□ -0.5
UFD1-205ENST00000459854 CERKQ8TCT0 537 aa11.9□□□□□ -0.5
UFD1-205ENST00000459854 CAVIN1Q6NZI2 390 aaKnown RBP11.89□□□□□ -0.51
UFD1-205ENST00000459854 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 BECN2A8MW95 431 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 SETBP1Q9Y6X0 1596 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 KCNH5Q8NCM2 988 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 UBE2Q2Q8WVN8 375 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
UFD1-205ENST00000459854 U2SURPO15042 1029 aaKnown RBP11.89□□□□□ -0.51
UFD1-205ENST00000459854 HSP90B2PQ58FF3 399 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 TESK2Q96S53 571 aa11.89□□□□□ -0.51
UFD1-205ENST00000459854 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
UFD1-205ENST00000459854 KDM5AP29375 1690 aaKnown RBP11.88□□□□□ -0.51
UFD1-205ENST00000459854 MED14O60244 1454 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 NRXN1Q9ULB1 1477 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
UFD1-205ENST00000459854 ADGRL3Q9HAR2 1447 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 TTC21AQ8NDW8 1320 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 NCOA3Q9Y6Q9 1424 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 RDXP35241 583 aaKnown RBP11.88□□□□□ -0.51
UFD1-205ENST00000459854 USP8P40818 1118 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 DISP3Q9P2K9 1392 aa11.88□□□□□ -0.51
UFD1-205ENST00000459854 PDCL2Q8N4E4 241 aa11.87□□□□□ -0.51
UFD1-205ENST00000459854 CCP110O43303 1012 aa11.87□□□□□ -0.51
UFD1-205ENST00000459854 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
UFD1-205ENST00000459854 NUTM2BA6NNL0 878 aaPredicted RBP11.86□□□□□ -0.51
UFD1-205ENST00000459854 NUTM2EB1AL46 878 aaPredicted RBP11.86□□□□□ -0.51
UFD1-205ENST00000459854 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
UFD1-205ENST00000459854 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
UFD1-205ENST00000459854 PPLO60437 1756 aa11.86□□□□□ -0.51
UFD1-205ENST00000459854 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 CPS1P31327 1500 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 IQGAP1P46940 1657 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 REC8O95072 547 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 R3HCC1Q9Y3T6 440 aaKnown RBP11.85□□□□□ -0.51
UFD1-205ENST00000459854 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 ORAI2Q96SN7 254 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 MNS1Q8NEH6 495 aa11.85□□□□□ -0.51
UFD1-205ENST00000459854 ZNF142P52746 1687 aaPredicted RBP11.85□□□□□ -0.51
UFD1-205ENST00000459854 PLEKHG3A1L390 1219 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 MBD3O95983 291 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 PRDM11Q9NQV5 511 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 ANKARQ7Z5J8 1434 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 E9PSI1 815 aa11.84□□□□□ -0.51
UFD1-205ENST00000459854 PHF23Q9BUL5 403 aaPredicted RBP11.84□□□□□ -0.51
UFD1-205ENST00000459854 TRPM1Q7Z4N2 1603 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 TECPR2O15040 1411 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
UFD1-205ENST00000459854 SMC4Q9NTJ3 1288 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 NSD2O96028 1365 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 RRP12Q5JTH9 1297 aaKnown RBP11.83□□□□□ -0.52
UFD1-205ENST00000459854 KIAA1210Q9ULL0 1709 aa11.83□□□□□ -0.52
UFD1-205ENST00000459854 IPO7O95373 1038 aaKnown RBP11.83□□□□□ -0.52
UFD1-205ENST00000459854 TTC21BQ7Z4L5 1316 aa11.82□□□□□ -0.52
UFD1-205ENST00000459854 LEKR1Q6ZMV7 388 aa11.82□□□□□ -0.52
UFD1-205ENST00000459854 SF3A1Q15459 793 aaKnown RBP11.82□□□□□ -0.52
UFD1-205ENST00000459854 BRD4O60885 1362 aaPredicted RBP11.82□□□□□ -0.52
UFD1-205ENST00000459854 CEP89Q96ST8 783 aa11.82□□□□□ -0.52
UFD1-205ENST00000459854 RUFY1Q96T51 708 aa11.82□□□□□ -0.52
UFD1-205ENST00000459854 HOOK1Q9UJC3 728 aaKnown RBP11.81□□□□□ -0.52
UFD1-205ENST00000459854 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
UFD1-205ENST00000459854 SENP3-EIF4A1A0A087X0R7 540 aa11.81□□□□□ -0.52
UFD1-205ENST00000459854 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
UFD1-205ENST00000459854 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.527e-9■■■□□ 15.8
UFD1-205ENST00000459854 PTPRUQ92729 1446 aa11.81□□□□□ -0.52
UFD1-205ENST00000459854 ANKRD20A12PQ8NF67 263 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms