RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 ARHGEF25Q86VW2 580 aa22.66■■□□□ 1.22
CPSF6-203ENST00000456847 ANKRD36BQ8N2N9 1353 aa22.66■■□□□ 1.22
CPSF6-203ENST00000456847 TCP11L2Q8N4U5 519 aa22.65■■□□□ 1.22
CPSF6-203ENST00000456847 SF3B2Q13435 895 aaKnown RBP22.65■■□□□ 1.22
CPSF6-203ENST00000456847 BARGINQ6ZT62 677 aa22.64■■□□□ 1.21
CPSF6-203ENST00000456847 ABCC6O95255 1503 aa22.64■■□□□ 1.21
CPSF6-203ENST00000456847 MYOM1P52179 1685 aa22.63■■□□□ 1.21
CPSF6-203ENST00000456847 TOM1L2Q6ZVM7 507 aa22.63■■□□□ 1.21
CPSF6-203ENST00000456847 WNK3Q9BYP7 1800 aa22.63■■□□□ 1.21
CPSF6-203ENST00000456847 OVOS2A0A0J9YW53 1432 aa22.63■■□□□ 1.21
CPSF6-203ENST00000456847 OVOS2Q6IE36 1432 aa22.63■■□□□ 1.21
CPSF6-203ENST00000456847 THRAP3Q9Y2W1 955 aaKnown RBP22.63■■□□□ 1.21
CPSF6-203ENST00000456847 AXIN2Q9Y2T1 843 aa22.62■■□□□ 1.21
CPSF6-203ENST00000456847 RGPD1P0DJD0 1748 aa22.62■■□□□ 1.21
CPSF6-203ENST00000456847 PARP4Q9UKK3 1724 aaKnown RBP22.62■■□□□ 1.21
CPSF6-203ENST00000456847 CSB-PGBD3P0DP91 1061 aa22.61■■□□□ 1.21
CPSF6-203ENST00000456847 FAM182BQ5T319 152 aa22.61■■□□□ 1.21
CPSF6-203ENST00000456847 WDR17Q8IZU2 1322 aa22.61■■□□□ 1.21
CPSF6-203ENST00000456847 EP400Q96L91 3159 aa22.6■■□□□ 1.21
CPSF6-203ENST00000456847 KIF20BQ96Q89 1820 aa22.6■■□□□ 1.21
CPSF6-203ENST00000456847 PDE3BQ13370 1112 aa22.59■■□□□ 1.21
CPSF6-203ENST00000456847 COG3Q96JB2 828 aa22.59■■□□□ 1.21
CPSF6-203ENST00000456847 EIF4G2P78344 907 aaKnown RBP eCLIP22.58■■□□□ 1.21
CPSF6-203ENST00000456847 POLR3GLQ9BT43 218 aa22.57■■□□□ 1.2
CPSF6-203ENST00000456847 LRRC37A3O60309 1634 aa22.56■■□□□ 1.2
CPSF6-203ENST00000456847 DEFB132Q7Z7B7 95 aa22.55■■□□□ 1.2
CPSF6-203ENST00000456847 TNS1Q9HBL0 1735 aaKnown RBP22.55■■□□□ 1.2
CPSF6-203ENST00000456847 HSPA5P11021 654 aaKnown RBP22.55■■□□□ 1.2
CPSF6-203ENST00000456847 FAM196AQ6ZSG2 479 aa22.53■■□□□ 1.2
CPSF6-203ENST00000456847 BAG6P46379 1132 aa22.53■■□□□ 1.2
CPSF6-203ENST00000456847 CARD10Q9BWT7 1032 aa22.52■■□□□ 1.2
CPSF6-203ENST00000456847 GGNBP2Q9H3C7 697 aa22.51■■□□□ 1.19
CPSF6-203ENST00000456847 CCDC7Q96M83 1385 aa22.51■■□□□ 1.19
CPSF6-203ENST00000456847 NSD3Q9BZ95 1437 aa22.51■■□□□ 1.19
CPSF6-203ENST00000456847 ERBB3P21860 1342 aa22.5■■□□□ 1.19
CPSF6-203ENST00000456847 DDB1Q16531 1140 aa22.5■■□□□ 1.19
CPSF6-203ENST00000456847 FAM208AQ9UK61 1670 aaKnown RBP22.5■■□□□ 1.19
CPSF6-203ENST00000456847 ANKRD24Q8TF21 1146 aa22.49■■□□□ 1.19
CPSF6-203ENST00000456847 CDCA7Q9BWT1 371 aaPredicted RBP22.49■■□□□ 1.19
CPSF6-203ENST00000456847 FYB1O15117 783 aa22.49■■□□□ 1.19
CPSF6-203ENST00000456847 NLRP2Q9NX02 1062 aa22.49■■□□□ 1.19
CPSF6-203ENST00000456847 TRIM37O94972 964 aa22.48■■□□□ 1.19
CPSF6-203ENST00000456847 AMPHP49418 695 aa22.47■■□□□ 1.19
CPSF6-203ENST00000456847 MAP3K19Q56UN5 1328 aa22.47■■□□□ 1.19
CPSF6-203ENST00000456847 OVOS2A0A0G2JMS6 1433 aa22.47■■□□□ 1.19
CPSF6-203ENST00000456847 DISP2A7MBM2 1401 aa22.46■■□□□ 1.19
CPSF6-203ENST00000456847 IP6K1Q92551 441 aa22.46■■□□□ 1.19
CPSF6-203ENST00000456847 PEAK1Q9H792 1746 aa22.46■■□□□ 1.19
CPSF6-203ENST00000456847 LTV1Q96GA3 475 aaPredicted RBP22.45■■□□□ 1.18
CPSF6-203ENST00000456847 CARD14Q9BXL6 1004 aa22.45■■□□□ 1.18
CPSF6-203ENST00000456847 FBLN1P23142 703 aa22.45■■□□□ 1.18
CPSF6-203ENST00000456847 EN1Q05925 392 aaPredicted RBP22.44■■□□□ 1.18
CPSF6-203ENST00000456847 RTL1A6NKG5 1358 aa22.43■■□□□ 1.18
CPSF6-203ENST00000456847 SBF2Q86WG5 1849 aa22.43■■□□□ 1.18
CPSF6-203ENST00000456847 C11orf95C9JLR9 678 aaPredicted RBP22.43■■□□□ 1.18
CPSF6-203ENST00000456847 HOXC9P31274 260 aa22.43■■□□□ 1.18
CPSF6-203ENST00000456847 RRS1Q15050 365 aaKnown RBP22.42■■□□□ 1.18
CPSF6-203ENST00000456847 TNS2Q63HR2 1409 aa22.42■■□□□ 1.18
CPSF6-203ENST00000456847 RGPD2P0DJD1 1756 aa22.41■■□□□ 1.18
CPSF6-203ENST00000456847 APBA3O96018 575 aa22.41■■□□□ 1.18
CPSF6-203ENST00000456847 CGNL1Q0VF96 1302 aa22.4■■□□□ 1.18
CPSF6-203ENST00000456847 ANKRD26Q9UPS8 1709 aa22.4■■□□□ 1.18
CPSF6-203ENST00000456847 EXOC5O00471 708 aa22.4■■□□□ 1.18
CPSF6-203ENST00000456847 IL2RBP14784 551 aa22.39■■□□□ 1.17
CPSF6-203ENST00000456847 SMG6Q86US8 1419 aaKnown RBP22.38■■□□□ 1.17
CPSF6-203ENST00000456847 MARCH10Q8NA82 808 aaPredicted RBP22.38■■□□□ 1.17
CPSF6-203ENST00000456847 EZH2Q15910 746 aaKnown RBP22.37■■□□□ 1.17
CPSF6-203ENST00000456847 RREB1Q92766 1687 aa22.35■■□□□ 1.17
CPSF6-203ENST00000456847 FLT4P35916 1363 aa22.35■■□□□ 1.17
CPSF6-203ENST00000456847 PARD3Q8TEW0 1356 aa22.34■■□□□ 1.17
CPSF6-203ENST00000456847 PANK3Q9H999 370 aa22.34■■□□□ 1.17
CPSF6-203ENST00000456847 MAP2P11137 1827 aaKnown RBP22.34■■□□□ 1.17
CPSF6-203ENST00000456847 CAMKK2Q96RR4 588 aa22.33■■□□□ 1.16
CPSF6-203ENST00000456847 KIF24Q5T7B8 1368 aa22.33■■□□□ 1.16
CPSF6-203ENST00000456847 NUP188Q5SRE5 1749 aa22.32■■□□□ 1.16
CPSF6-203ENST00000456847 BCL9O00512 1426 aa22.32■■□□□ 1.16
CPSF6-203ENST00000456847 RGPD3A6NKT7 1758 aaPredicted RBP22.31■■□□□ 1.16
CPSF6-203ENST00000456847 RGPD4Q7Z3J3 1758 aa22.31■■□□□ 1.16
CPSF6-203ENST00000456847 INSRP06213 1382 aa22.31■■□□□ 1.16
CPSF6-203ENST00000456847 EMILIN1Q9Y6C2 1016 aa22.31■■□□□ 1.16
CPSF6-203ENST00000456847 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
CPSF6-203ENST00000456847 PPM1GO15355 546 aaPredicted RBP22.3■■□□□ 1.16
CPSF6-203ENST00000456847 PSDA5PKW4 1024 aaPredicted RBP22.29■■□□□ 1.16
CPSF6-203ENST00000456847 HSP90AB2PQ58FF8 381 aa22.29■■□□□ 1.16
CPSF6-203ENST00000456847 BCL11BQ9C0K0 894 aaPredicted RBP22.29■■□□□ 1.16
CPSF6-203ENST00000456847 KIF7Q2M1P5 1343 aa22.28■■□□□ 1.16
CPSF6-203ENST00000456847 TNNT2P45379 298 aaPredicted RBP22.27■■□□□ 1.16
CPSF6-203ENST00000456847 USHBP1Q8N6Y0 703 aa22.27■■□□□ 1.16
CPSF6-203ENST00000456847 NSD2O96028 1365 aa22.27■■□□□ 1.16
CPSF6-203ENST00000456847 NBPF6Q5VWK0 638 aa22.27■■□□□ 1.16
CPSF6-203ENST00000456847 NBPF4Q96M43 638 aa22.27■■□□□ 1.16
CPSF6-203ENST00000456847 MEGF6O75095 1541 aa22.27■■□□□ 1.16
CPSF6-203ENST00000456847 KAT6BQ8WYB5 2073 aa22.27■■□□□ 1.15
CPSF6-203ENST00000456847 PTF1AQ7RTS3 328 aa22.26■■□□□ 1.15
CPSF6-203ENST00000456847 SHANK3Q9BYB0 1731 aa22.26■■□□□ 1.15
CPSF6-203ENST00000456847 DDX54Q8TDD1 881 aaKnown RBP22.25■■□□□ 1.15
CPSF6-203ENST00000456847 ACSBG1Q96GR2 724 aa22.25■■□□□ 1.15
CPSF6-203ENST00000456847 R3HDM1Q15032 1099 aaKnown RBP22.25■■□□□ 1.15
CPSF6-203ENST00000456847 RAPGEF4Q8WZA2 1011 aa22.24■■□□□ 1.15
CPSF6-203ENST00000456847 KNSTRNQ9Y448 316 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms