RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 HNRNPMP52272 730 aaKnown RBP eCLIP14.6□□□□□ -0.079e-7■■■□□ 16.3
NEDD4L-208ENST00000456173 LRRFIP2Q9Y608 721 aaKnown RBP14.6□□□□□ -0.07
NEDD4L-208ENST00000456173 PPFIBP1Q86W92 1011 aa14.6□□□□□ -0.07
NEDD4L-208ENST00000456173 FGD5Q6ZNL6 1462 aa14.59□□□□□ -0.07
NEDD4L-208ENST00000456173 ZBTB9Q96C00 473 aa14.59□□□□□ -0.07
NEDD4L-208ENST00000456173 SLFN5Q08AF3 891 aa14.59□□□□□ -0.07
NEDD4L-208ENST00000456173 MARCH6O60337 910 aa14.59□□□□□ -0.07
NEDD4L-208ENST00000456173 FILIP1LQ4L180 1135 aa14.59□□□□□ -0.07
NEDD4L-208ENST00000456173 AQRO60306 1485 aaKnown RBP eCLIP14.59□□□□□ -0.074e-8■■■□□ 16.5
NEDD4L-208ENST00000456173 TDO2P48775 406 aa14.59□□□□□ -0.07
NEDD4L-208ENST00000456173 ATF7IPQ6VMQ6 1270 aa14.59□□□□□ -0.07
NEDD4L-208ENST00000456173 HS1BP3Q53T59 392 aa14.58□□□□□ -0.08
NEDD4L-208ENST00000456173 WWC1Q8IX03 1113 aa14.58□□□□□ -0.08
NEDD4L-208ENST00000456173 FAM107BQ9H098 131 aa14.58□□□□□ -0.08
NEDD4L-208ENST00000456173 FEZ1Q99689 392 aa14.58□□□□□ -0.08
NEDD4L-208ENST00000456173 JPH4Q96JJ6 628 aa14.58□□□□□ -0.08
NEDD4L-208ENST00000456173 GBP3Q9H0R5 595 aa14.58□□□□□ -0.08
NEDD4L-208ENST00000456173 C9orf78Q9NZ63 289 aaPredicted RBP14.58□□□□□ -0.08
NEDD4L-208ENST00000456173 TTC31Q49AM3 519 aaPredicted RBP14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 NINLQ9Y2I6 1382 aa14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 ATP2B1P20020 1258 aa14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 EIF2S2P20042 333 aaKnown RBP14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 CNTROBQ8N137 903 aa14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 SRRTQ9BXP5 876 aaKnown RBP14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 GNAI1P63096 354 aa14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 CFAP100Q494V2 611 aa14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 TSC1Q92574 1164 aa14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 ZNF396Q96N95 335 aaPredicted RBP14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 CYP46A1Q9Y6A2 500 aa14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.57□□□□□ -0.08
NEDD4L-208ENST00000456173 ZSWIM4Q9H7M6 989 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 CASQ1P31415 396 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 HMOX1P09601 288 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 MTHFSP49914 203 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 SNW1Q13573 536 aaKnown RBP14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 CCDC181Q5TID7 509 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 MICALL1Q8N3F8 863 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 CBFA2T2O43439 604 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 UVSSAQ2YD98 709 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 ARHGAP29Q52LW3 1261 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 GGT6Q6P531 493 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 CERS3Q8IU89 383 aa14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 NOL7Q9UMY1 257 aaKnown RBP14.56□□□□□ -0.08
NEDD4L-208ENST00000456173 NF2P35240 595 aa14.55□□□□□ -0.08
NEDD4L-208ENST00000456173 NFXL1Q6ZNB6 911 aa14.55□□□□□ -0.08
NEDD4L-208ENST00000456173 CCDC47Q96A33 483 aaKnown RBP14.55□□□□□ -0.08
NEDD4L-208ENST00000456173 TAX1BP1Q86VP1 789 aa14.55□□□□□ -0.08
NEDD4L-208ENST00000456173 MAP4K4O95819 1239 aaPredicted RBP14.55□□□□□ -0.08
NEDD4L-208ENST00000456173 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
NEDD4L-208ENST00000456173 CCDC186Q7Z3E2 898 aa14.55□□□□□ -0.08
NEDD4L-208ENST00000456173 GTF3C6Q969F1 213 aa14.55□□□□□ -0.08
NEDD4L-208ENST00000456173 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 SAFBQ15424 915 aaKnown RBP eCLIP14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 KIF4BQ2VIQ3 1234 aa14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 LTV1Q96GA3 475 aaPredicted RBP14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 UNC13AQ9UPW8 1703 aa14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 ZSCAN12O43309 604 aa14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 GIMAP6Q6P9H5 292 aa14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 STK11IPQ8N1F8 1099 aa14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 INCENPQ9NQS7 918 aa14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 SURF6O75683 361 aaKnown RBP14.54□□□□□ -0.08
NEDD4L-208ENST00000456173 G3BP1Q13283 466 aaKnown RBP eCLIP14.54□□□□□ -0.081e-6■□□□□ 10.7
NEDD4L-208ENST00000456173 ZNF397Q8NF99 534 aaPredicted RBP14.53□□□□□ -0.08
NEDD4L-208ENST00000456173 IVLP07476 585 aa14.53□□□□□ -0.08
NEDD4L-208ENST00000456173 CAPN2P17655 700 aa14.53□□□□□ -0.08
NEDD4L-208ENST00000456173 TRDNQ13061 729 aa14.53□□□□□ -0.08
NEDD4L-208ENST00000456173 DRC1Q96MC2 740 aa14.53□□□□□ -0.08
NEDD4L-208ENST00000456173 CFTRP13569 1480 aa14.53□□□□□ -0.08
NEDD4L-208ENST00000456173 RRBP1Q9P2E9 1410 aaKnown RBP14.52□□□□□ -0.08
NEDD4L-208ENST00000456173 SEC24BO95487 1268 aa14.52□□□□□ -0.08
NEDD4L-208ENST00000456173 MCM6Q14566 821 aa14.52□□□□□ -0.08
NEDD4L-208ENST00000456173 TMEM57Q8N5G2 664 aa14.52□□□□□ -0.08
NEDD4L-208ENST00000456173 FSD1Q9BTV5 496 aa14.52□□□□□ -0.08
NEDD4L-208ENST00000456173 IGF1RP08069 1367 aa14.52□□□□□ -0.08
NEDD4L-208ENST00000456173 GBP2P32456 591 aaPredicted RBP14.52□□□□□ -0.09
NEDD4L-208ENST00000456173 KRBA2Q6ZNG9 492 aa14.52□□□□□ -0.09
NEDD4L-208ENST00000456173 NEMFO60524 1076 aa14.51□□□□□ -0.09
NEDD4L-208ENST00000456173 CCDC83Q8IWF9 413 aa14.51□□□□□ -0.09
NEDD4L-208ENST00000456173 C17orf53Q8N3J3 647 aaPredicted RBP14.51□□□□□ -0.09
NEDD4L-208ENST00000456173 PDRG1Q9NUG6 133 aa14.51□□□□□ -0.09
NEDD4L-208ENST00000456173 MYRIPQ8NFW9 859 aa14.51□□□□□ -0.09
NEDD4L-208ENST00000456173 KIF21BO75037 1637 aa14.51□□□□□ -0.09
NEDD4L-208ENST00000456173 EPB41L2O43491 1005 aaKnown RBP14.51□□□□□ -0.09
NEDD4L-208ENST00000456173 TERF1P54274 439 aa14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 RBM33Q96EV2 1170 aaKnown RBP14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 JAKMIP1Q96N16 626 aaKnown RBP14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 MIA2Q96PC5 1412 aa14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 UBTFL1P0CB47 393 aaPredicted RBP14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 HSP90AB4PQ58FF6 505 aa14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 CYB5RLQ6IPT4 315 aa14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 CCDC91Q7Z6B0 441 aa14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 ARFGAP3Q9NP61 516 aa14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.5□□□□□ -0.092e-7■■■■□ 22.9
NEDD4L-208ENST00000456173 ZNHIT6Q9NWK9 470 aaKnown RBP14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 ZNF165P49910 485 aa14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 RBSNQ9H1K0 784 aa14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 CFAP45Q9UL16 551 aa14.5□□□□□ -0.09
NEDD4L-208ENST00000456173 SMTNL1A8MU46 457 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms