RNA–Protein interactions for RNA: ENST00000456079.1

PLOD3-207, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-207ENST00000456079 ONECUT3O60422 494 aaPredicted RBP20.65■□□□□ 0.9
PLOD3-207ENST00000456079 CCDC9Q9Y3X0 531 aaKnown RBP20.65■□□□□ 0.9
PLOD3-207ENST00000456079 SPATA31A1Q5TZJ5 1347 aa20.64■□□□□ 0.89
PLOD3-207ENST00000456079 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.89
PLOD3-207ENST00000456079 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
PLOD3-207ENST00000456079 COG3Q96JB2 828 aa20.63■□□□□ 0.89
PLOD3-207ENST00000456079 SEPT12Q8IYM1 358 aa20.61■□□□□ 0.89
PLOD3-207ENST00000456079 CCDC7Q96M83 1385 aa20.6■□□□□ 0.89
PLOD3-207ENST00000456079 RGPD5Q99666 1765 aa20.6■□□□□ 0.89
PLOD3-207ENST00000456079 EVA1CP58658 441 aa20.6■□□□□ 0.89
PLOD3-207ENST00000456079 USP35Q9P2H5 1018 aa20.6■□□□□ 0.89
PLOD3-207ENST00000456079 MAP3K19Q56UN5 1328 aa20.59■□□□□ 0.89
PLOD3-207ENST00000456079 RRS1Q15050 365 aaKnown RBP20.58■□□□□ 0.89
PLOD3-207ENST00000456079 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
PLOD3-207ENST00000456079 BRWD3Q6RI45 1802 aa20.57■□□□□ 0.88
PLOD3-207ENST00000456079 LTN1O94822 1766 aa20.57■□□□□ 0.88
PLOD3-207ENST00000456079 UPF1Q92900 1129 aaKnown RBP eCLIP20.56■□□□□ 0.88
PLOD3-207ENST00000456079 THSD7AQ9UPZ6 1657 aa20.56■□□□□ 0.88
PLOD3-207ENST00000456079 WDR17Q8IZU2 1322 aa20.55■□□□□ 0.88
PLOD3-207ENST00000456079 CRB1P82279 1406 aa20.55■□□□□ 0.88
PLOD3-207ENST00000456079 IP6K1Q92551 441 aa20.55■□□□□ 0.88
PLOD3-207ENST00000456079 CGNL1Q0VF96 1302 aa20.54■□□□□ 0.88
PLOD3-207ENST00000456079 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
PLOD3-207ENST00000456079 ERBB3P21860 1342 aa20.53■□□□□ 0.88
PLOD3-207ENST00000456079 HOXC9P31274 260 aa20.53■□□□□ 0.88
PLOD3-207ENST00000456079 FAM182BQ5T319 152 aa20.53■□□□□ 0.88
PLOD3-207ENST00000456079 TCP11L2Q8N4U5 519 aa20.53■□□□□ 0.88
PLOD3-207ENST00000456079 PEAK1Q9H792 1746 aa20.53■□□□□ 0.88
PLOD3-207ENST00000456079 ABCC6O95255 1503 aa20.53■□□□□ 0.88
PLOD3-207ENST00000456079 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.88
PLOD3-207ENST00000456079 BARGINQ6ZT62 677 aa20.52■□□□□ 0.88
PLOD3-207ENST00000456079 TOM1L2Q6ZVM7 507 aa20.52■□□□□ 0.88
PLOD3-207ENST00000456079 ANKRD24Q8TF21 1146 aa20.52■□□□□ 0.88
PLOD3-207ENST00000456079 EMILIN1Q9Y6C2 1016 aa20.52■□□□□ 0.88
PLOD3-207ENST00000456079 A0A0G2JS52 829 aa20.5■□□□□ 0.87
PLOD3-207ENST00000456079 MYT1Q01538 1121 aa20.5■□□□□ 0.87
PLOD3-207ENST00000456079 TNNT2P45379 298 aaPredicted RBP20.49■□□□□ 0.87
PLOD3-207ENST00000456079 HSP90AB2PQ58FF8 381 aa20.49■□□□□ 0.87
PLOD3-207ENST00000456079 KRT27Q7Z3Y8 459 aa20.49■□□□□ 0.87
PLOD3-207ENST00000456079 LTV1Q96GA3 475 aaPredicted RBP20.49■□□□□ 0.87
PLOD3-207ENST00000456079 CARD10Q9BWT7 1032 aa20.49■□□□□ 0.87
PLOD3-207ENST00000456079 CSB-PGBD3P0DP91 1061 aa20.48■□□□□ 0.87
PLOD3-207ENST00000456079 THRAP3Q9Y2W1 955 aaKnown RBP20.48■□□□□ 0.87
PLOD3-207ENST00000456079 DISP2A7MBM2 1401 aa20.47■□□□□ 0.87
PLOD3-207ENST00000456079 BLMP54132 1417 aaPredicted RBP20.47■□□□□ 0.87
PLOD3-207ENST00000456079 AMPHP49418 695 aa20.47■□□□□ 0.87
PLOD3-207ENST00000456079 POLKQ9UBT6 870 aa20.47■□□□□ 0.87
PLOD3-207ENST00000456079 NLRP2Q9NX02 1062 aa20.45■□□□□ 0.86
PLOD3-207ENST00000456079 KNSTRNQ9Y448 316 aa20.45■□□□□ 0.86
PLOD3-207ENST00000456079 RTL1A6NKG5 1358 aa20.45■□□□□ 0.86
PLOD3-207ENST00000456079 ANKRD26Q9UPS8 1709 aa20.44■□□□□ 0.86
PLOD3-207ENST00000456079 NBPF6Q5VWK0 638 aa20.43■□□□□ 0.86
PLOD3-207ENST00000456079 NBPF4Q96M43 638 aa20.43■□□□□ 0.86
PLOD3-207ENST00000456079 NSD2O96028 1365 aa20.42■□□□□ 0.86
PLOD3-207ENST00000456079 PARP4Q9UKK3 1724 aaKnown RBP20.41■□□□□ 0.86
PLOD3-207ENST00000456079 RGPD2P0DJD1 1756 aa20.41■□□□□ 0.86
PLOD3-207ENST00000456079 PPM1GO15355 546 aaPredicted RBP20.41■□□□□ 0.86
PLOD3-207ENST00000456079 INSRP06213 1382 aa20.41■□□□□ 0.86
PLOD3-207ENST00000456079 FLT4P35916 1363 aa20.41■□□□□ 0.86
PLOD3-207ENST00000456079 LRRC37A3O60309 1634 aa20.41■□□□□ 0.86
PLOD3-207ENST00000456079 WNK3Q9BYP7 1800 aa20.41■□□□□ 0.86
PLOD3-207ENST00000456079 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
PLOD3-207ENST00000456079 MORC1Q86VD1 984 aa20.4■□□□□ 0.86
PLOD3-207ENST00000456079 USHBP1Q8N6Y0 703 aa20.4■□□□□ 0.86
PLOD3-207ENST00000456079 MAP2P11137 1827 aaKnown RBP20.39■□□□□ 0.86
PLOD3-207ENST00000456079 FAM208AQ9UK61 1670 aaKnown RBP20.39■□□□□ 0.86
PLOD3-207ENST00000456079 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.85
PLOD3-207ENST00000456079 KIF24Q5T7B8 1368 aa20.38■□□□□ 0.85
PLOD3-207ENST00000456079 MARCH10Q8NA82 808 aaPredicted RBP20.38■□□□□ 0.85
PLOD3-207ENST00000456079 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
PLOD3-207ENST00000456079 PDE3BQ13370 1112 aa20.36■□□□□ 0.85
PLOD3-207ENST00000456079 DDB1Q16531 1140 aa20.36■□□□□ 0.85
PLOD3-207ENST00000456079 PTF1AQ7RTS3 328 aa20.35■□□□□ 0.85
PLOD3-207ENST00000456079 MEGF6O75095 1541 aa20.35■□□□□ 0.85
PLOD3-207ENST00000456079 IL2RBP14784 551 aa20.34■□□□□ 0.85
PLOD3-207ENST00000456079 EIF4A2Q14240 407 aaKnown RBP20.34■□□□□ 0.85
PLOD3-207ENST00000456079 DEFB132Q7Z7B7 95 aa20.34■□□□□ 0.85
PLOD3-207ENST00000456079 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
PLOD3-207ENST00000456079 ZEB1P37275 1124 aaPredicted RBP20.33■□□□□ 0.85
PLOD3-207ENST00000456079 EYA1Q99502 592 aa20.33■□□□□ 0.85
PLOD3-207ENST00000456079 CDCA7Q9BWT1 371 aaPredicted RBP20.33■□□□□ 0.85
PLOD3-207ENST00000456079 TNS2Q63HR2 1409 aa20.32■□□□□ 0.84
PLOD3-207ENST00000456079 NCAPD2Q15021 1401 aa20.31■□□□□ 0.84
PLOD3-207ENST00000456079 EXOC5O00471 708 aa20.31■□□□□ 0.84
PLOD3-207ENST00000456079 TRIM37O94972 964 aa20.31■□□□□ 0.84
PLOD3-207ENST00000456079 FAM196AQ6ZSG2 479 aa20.31■□□□□ 0.84
PLOD3-207ENST00000456079 MTHFSP49914 203 aa20.29■□□□□ 0.84
PLOD3-207ENST00000456079 CCDC125Q86Z20 511 aa20.28■□□□□ 0.84
PLOD3-207ENST00000456079 OVOS2A0A0G2JMS6 1433 aa20.27■□□□□ 0.84
PLOD3-207ENST00000456079 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.84
PLOD3-207ENST00000456079 TNS1Q9HBL0 1735 aaKnown RBP20.27■□□□□ 0.83
PLOD3-207ENST00000456079 IL13P35225 146 aa20.26■□□□□ 0.83
PLOD3-207ENST00000456079 SHANK3Q9BYB0 1731 aa20.26■□□□□ 0.83
PLOD3-207ENST00000456079 SRCAPQ6ZRS2 3230 aa20.26■□□□□ 0.83
PLOD3-207ENST00000456079 KCNQ2O43526 872 aa20.25■□□□□ 0.83
PLOD3-207ENST00000456079 IGSF1Q8N6C5 1336 aa20.25■□□□□ 0.83
PLOD3-207ENST00000456079 EN1Q05925 392 aaPredicted RBP20.24■□□□□ 0.83
PLOD3-207ENST00000456079 AEBP1Q8IUX7 1158 aa20.24■□□□□ 0.83
PLOD3-207ENST00000456079 DDX54Q8TDD1 881 aaKnown RBP20.24■□□□□ 0.83
PLOD3-207ENST00000456079 BCL9O00512 1426 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms