RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 IP6K1Q92551 441 aa22.3■■□□□ 1.16
CCDC90B-202ENST00000455220 LMO7Q8WWI1 1683 aa22.28■■□□□ 1.16
CCDC90B-202ENST00000455220 BLMP54132 1417 aaPredicted RBP22.28■■□□□ 1.16
CCDC90B-202ENST00000455220 HSP90AB2PQ58FF8 381 aa22.28■■□□□ 1.16
CCDC90B-202ENST00000455220 PRDM11Q9NQV5 511 aa22.27■■□□□ 1.16
CCDC90B-202ENST00000455220 COL14A1Q05707 1796 aaKnown RBP22.25■■□□□ 1.15
CCDC90B-202ENST00000455220 ZBTB7CA1YPR0 619 aa22.25■■□□□ 1.15
CCDC90B-202ENST00000455220 DIAPH1O60610 1272 aaKnown RBP22.25■■□□□ 1.15
CCDC90B-202ENST00000455220 PNISRQ8TF01 805 aaKnown RBP22.25■■□□□ 1.15
CCDC90B-202ENST00000455220 AXIN2Q9Y2T1 843 aa22.25■■□□□ 1.15
CCDC90B-202ENST00000455220 RGPD5Q99666 1765 aa22.24■■□□□ 1.15
CCDC90B-202ENST00000455220 IL13P35225 146 aa22.24■■□□□ 1.15
CCDC90B-202ENST00000455220 CHRNA2Q15822 529 aa22.24■■□□□ 1.15
CCDC90B-202ENST00000455220 LRP6O75581 1613 aa22.24■■□□□ 1.15
CCDC90B-202ENST00000455220 FAM83GA6ND36 823 aa22.23■■□□□ 1.15
CCDC90B-202ENST00000455220 EIF4A2Q14240 407 aaKnown RBP22.23■■□□□ 1.15
CCDC90B-202ENST00000455220 NUTM2BA6NNL0 878 aaPredicted RBP22.22■■□□□ 1.15
CCDC90B-202ENST00000455220 NUTM2EB1AL46 878 aaPredicted RBP22.22■■□□□ 1.15
CCDC90B-202ENST00000455220 NUTM2AQ8IVF1 878 aaPredicted RBP22.22■■□□□ 1.15
CCDC90B-202ENST00000455220 CAMTA1Q9Y6Y1 1673 aa22.22■■□□□ 1.15
CCDC90B-202ENST00000455220 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.15
CCDC90B-202ENST00000455220 ERBB3P21860 1342 aa22.2■■□□□ 1.14
CCDC90B-202ENST00000455220 ADAMTS2O95450 1211 aa22.2■■□□□ 1.14
CCDC90B-202ENST00000455220 NUDCQ9Y266 331 aa22.2■■□□□ 1.14
CCDC90B-202ENST00000455220 PLCH1Q4KWH8 1693 aa22.19■■□□□ 1.14
CCDC90B-202ENST00000455220 COL5A2P05997 1499 aaPredicted RBP22.19■■□□□ 1.14
CCDC90B-202ENST00000455220 ANKRD24Q8TF21 1146 aa22.18■■□□□ 1.14
CCDC90B-202ENST00000455220 FAM208AQ9UK61 1670 aaKnown RBP22.17■■□□□ 1.14
CCDC90B-202ENST00000455220 NWD2Q9ULI1 1742 aa22.17■■□□□ 1.14
CCDC90B-202ENST00000455220 SLIT2O94813 1529 aa22.17■■□□□ 1.14
CCDC90B-202ENST00000455220 WDR43Q15061 677 aaKnown RBP eCLIP22.16■■□□□ 1.14
CCDC90B-202ENST00000455220 NCAPD2Q15021 1401 aa22.15■■□□□ 1.14
CCDC90B-202ENST00000455220 LTV1Q96GA3 475 aaPredicted RBP22.15■■□□□ 1.14
CCDC90B-202ENST00000455220 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
CCDC90B-202ENST00000455220 NRAPQ86VF7 1730 aa22.14■■□□□ 1.14
CCDC90B-202ENST00000455220 U2SURPO15042 1029 aaKnown RBP22.14■■□□□ 1.13
CCDC90B-202ENST00000455220 BTG4Q9NY30 223 aa22.14■■□□□ 1.13
CCDC90B-202ENST00000455220 ADAMTS8Q9UP79 889 aa22.14■■□□□ 1.13
CCDC90B-202ENST00000455220 FAM9BQ8IZU0 186 aa22.13■■□□□ 1.13
CCDC90B-202ENST00000455220 EYA1Q99502 592 aa22.13■■□□□ 1.13
CCDC90B-202ENST00000455220 RGPD2P0DJD1 1756 aa22.13■■□□□ 1.13
CCDC90B-202ENST00000455220 WDR17Q8IZU2 1322 aa22.13■■□□□ 1.13
CCDC90B-202ENST00000455220 U2AF1L5P0DN76 240 aaPredicted RBP22.12■■□□□ 1.13
CCDC90B-202ENST00000455220 U2AF1Q01081 240 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCDC90B-202ENST00000455220 KDRP35968 1356 aa22.11■■□□□ 1.13
CCDC90B-202ENST00000455220 NBPF6Q5VWK0 638 aa22.11■■□□□ 1.13
CCDC90B-202ENST00000455220 FNBP4Q8N3X1 1017 aaPredicted RBP22.11■■□□□ 1.13
CCDC90B-202ENST00000455220 NBPF4Q96M43 638 aa22.11■■□□□ 1.13
CCDC90B-202ENST00000455220 C8orf37Q96NL8 207 aa22.1■■□□□ 1.13
CCDC90B-202ENST00000455220 ILDR2Q71H61 639 aa22.09■■□□□ 1.13
CCDC90B-202ENST00000455220 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.08■■□□□ 1.13
CCDC90B-202ENST00000455220 BCL9LQ86UU0 1499 aa22.08■■□□□ 1.13
CCDC90B-202ENST00000455220 FCHSD2O94868 740 aa22.08■■□□□ 1.13
CCDC90B-202ENST00000455220 CSB-PGBD3P0DP91 1061 aa22.08■■□□□ 1.13
CCDC90B-202ENST00000455220 MEX3CQ5U5Q3 659 aaKnown RBP22.08■■□□□ 1.13
CCDC90B-202ENST00000455220 NGLY1Q96IV0 654 aa22.08■■□□□ 1.13
CCDC90B-202ENST00000455220 EVA1CP58658 441 aa22.08■■□□□ 1.12
CCDC90B-202ENST00000455220 SULT6B1Q6IMI4 303 aa22.08■■□□□ 1.12
CCDC90B-202ENST00000455220 RSPH6AQ9H0K4 717 aa22.08■■□□□ 1.12
CCDC90B-202ENST00000455220 STRN4Q9NRL3 753 aa22.08■■□□□ 1.12
CCDC90B-202ENST00000455220 CRB1P82279 1406 aa22.07■■□□□ 1.12
CCDC90B-202ENST00000455220 LARP1Q6PKG0 1096 aaKnown RBP22.07■■□□□ 1.12
CCDC90B-202ENST00000455220 AEBP1Q8IUX7 1158 aa22.07■■□□□ 1.12
CCDC90B-202ENST00000455220 HMOX1P09601 288 aa22.06■■□□□ 1.12
CCDC90B-202ENST00000455220 NLRP2Q9NX02 1062 aa22.06■■□□□ 1.12
CCDC90B-202ENST00000455220 UNC5CLQ8IV45 518 aa22.05■■□□□ 1.12
CCDC90B-202ENST00000455220 PLEKHF1Q96S99 279 aa22.05■■□□□ 1.12
CCDC90B-202ENST00000455220 CARD10Q9BWT7 1032 aa22.05■■□□□ 1.12
CCDC90B-202ENST00000455220 TOM1L2Q6ZVM7 507 aa22.04■■□□□ 1.12
CCDC90B-202ENST00000455220 USHBP1Q8N6Y0 703 aa22.04■■□□□ 1.12
CCDC90B-202ENST00000455220 PNNQ9H307 717 aaKnown RBP22.04■■□□□ 1.12
CCDC90B-202ENST00000455220 PRKAR2BP31323 418 aa22.03■■□□□ 1.12
CCDC90B-202ENST00000455220 AFF2P51816 1311 aa22.01■■□□□ 1.11
CCDC90B-202ENST00000455220 RUNDC1Q96C34 613 aa22.01■■□□□ 1.11
CCDC90B-202ENST00000455220 USP21Q9UK80 565 aa22.01■■□□□ 1.11
CCDC90B-202ENST00000455220 PLEKHG2Q9H7P9 1386 aa22.01■■□□□ 1.11
CCDC90B-202ENST00000455220 CCDC146Q8IYE0 955 aa22■■□□□ 1.11
CCDC90B-202ENST00000455220 VPS72Q15906 364 aa21.99■■□□□ 1.11
CCDC90B-202ENST00000455220 SPATA31A5Q5VU36 1347 aa21.99■■□□□ 1.11
CCDC90B-202ENST00000455220 SPATA31A7Q8IWB4 1347 aa21.99■■□□□ 1.11
CCDC90B-202ENST00000455220 SPATA31A1Q5TZJ5 1347 aa21.98■■□□□ 1.11
CCDC90B-202ENST00000455220 MEGF6O75095 1541 aa21.98■■□□□ 1.11
CCDC90B-202ENST00000455220 ATRNO75882 1429 aa21.97■■□□□ 1.11
CCDC90B-202ENST00000455220 MAPK8IP3Q9UPT6 1336 aa21.97■■□□□ 1.11
CCDC90B-202ENST00000455220 WNK3Q9BYP7 1800 aa21.97■■□□□ 1.11
CCDC90B-202ENST00000455220 PHACTR3Q96KR7 559 aa21.96■■□□□ 1.11
CCDC90B-202ENST00000455220 THRAP3Q9Y2W1 955 aaKnown RBP21.96■■□□□ 1.11
CCDC90B-202ENST00000455220 DISP2A7MBM2 1401 aa21.96■■□□□ 1.11
CCDC90B-202ENST00000455220 PARP4Q9UKK3 1724 aaKnown RBP21.96■■□□□ 1.11
CCDC90B-202ENST00000455220 TCP11L2Q8N4U5 519 aa21.95■■□□□ 1.11
CCDC90B-202ENST00000455220 OVOS2A0A0G2JMS6 1433 aa21.95■■□□□ 1.1
CCDC90B-202ENST00000455220 SOCS7O14512 581 aa21.95■■□□□ 1.1
CCDC90B-202ENST00000455220 NEFMP07197 916 aa21.95■■□□□ 1.1
CCDC90B-202ENST00000455220 RAPGEF4Q8WZA2 1011 aa21.95■■□□□ 1.1
CCDC90B-202ENST00000455220 APAF1O14727 1248 aa21.94■■□□□ 1.1
CCDC90B-202ENST00000455220 USP35Q9P2H5 1018 aa21.94■■□□□ 1.1
CCDC90B-202ENST00000455220 PKD1L3Q7Z443 1732 aa21.94■■□□□ 1.1
CCDC90B-202ENST00000455220 TATP17735 454 aaPredicted RBP21.93■■□□□ 1.1
CCDC90B-202ENST00000455220 TRPC5Q9UL62 973 aaPredicted RBP21.93■■□□□ 1.1
CCDC90B-202ENST00000455220 IL2RBP14784 551 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms